Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0463:0454
Extra
PDB:
ATOM 1 O3' C A 462 60.242 134.654 60.287 1.00 26.63 O
ATOM 2 P G A 463 58.826 134.329 59.591 1.00 28.41 P
ATOM 3 OP1 G A 463 58.162 133.329 60.453 1.00 29.26 O
ATOM 4 OP2 G A 463 59.014 134.024 58.149 1.00 26.67 O
ATOM 5 O5' G A 463 58.019 135.691 59.727 1.00 26.00 O
ATOM 6 C5' G A 463 57.642 136.197 61.020 1.00 27.53 C
ATOM 7 C4' G A 463 56.976 137.546 60.885 1.00 30.04 C
ATOM 8 O4' G A 463 57.946 138.550 60.482 1.00 32.94 O
ATOM 9 C3' G A 463 55.907 137.651 59.814 1.00 31.54 C
ATOM 10 O3' G A 463 54.680 137.071 60.218 1.00 31.57 O
ATOM 11 C2' G A 463 55.843 139.154 59.593 1.00 32.54 C
ATOM 12 O2' G A 463 55.204 139.848 60.643 1.00 35.19 O
ATOM 13 C1' G A 463 57.326 139.505 59.628 1.00 32.10 C
ATOM 14 N9 G A 463 57.907 139.371 58.298 1.00 33.25 N
ATOM 15 C8 G A 463 58.573 138.280 57.795 1.00 35.43 C
ATOM 16 N7 G A 463 58.944 138.432 56.553 1.00 35.73 N
ATOM 17 C5 G A 463 58.501 139.706 56.218 1.00 33.21 C
ATOM 18 C6 G A 463 58.601 140.416 54.996 1.00 33.26 C
ATOM 19 O6 G A 463 59.093 140.034 53.923 1.00 33.08 O
ATOM 20 N1 G A 463 58.039 141.687 55.095 1.00 30.37 N
ATOM 21 C2 G A 463 57.439 142.194 56.219 1.00 32.25 C
ATOM 22 N2 G A 463 56.956 143.439 56.124 1.00 30.31 N
ATOM 23 N3 G A 463 57.320 141.528 57.361 1.00 32.28 N
ATOM 24 C4 G A 463 57.873 140.303 57.289 1.00 32.40 C
ATOM 25 P A A 464 53.645 136.544 59.106 1.00 31.80 P
ATOM 26 OP1 A A 464 52.681 135.705 59.856 1.00 31.80 O
ATOM 27 OP2 A A 464 54.338 135.976 57.923 1.00 28.67 O
ATOM 28 O5' A A 464 52.940 137.889 58.636 1.00 30.41 O
TER
ATOM 1 O3' U B 453 55.347 149.038 53.644 1.00 39.99 O
ATOM 2 P A B 454 56.544 149.433 54.640 1.00 38.34 P
ATOM 3 OP1 A B 454 56.872 150.845 54.359 1.00 43.10 O
ATOM 4 OP2 A B 454 57.613 148.406 54.551 1.00 38.45 O
ATOM 5 O5' A B 454 55.869 149.373 56.079 1.00 36.41 O
ATOM 6 C5' A B 454 54.843 150.301 56.430 1.00 35.38 C
ATOM 7 C4' A B 454 54.349 150.038 57.830 1.00 37.63 C
ATOM 8 O4' A B 454 53.588 148.803 57.875 1.00 38.04 O
ATOM 9 C3' A B 454 55.411 149.846 58.896 1.00 37.30 C
ATOM 10 O3' A B 454 55.944 151.088 59.340 1.00 39.45 O
ATOM 11 C2' A B 454 54.624 149.131 59.987 1.00 36.87 C
ATOM 12 O2' A B 454 53.797 149.991 60.732 1.00 34.59 O
ATOM 13 C1' A B 454 53.734 148.205 59.155 1.00 37.66 C
ATOM 14 N9 A B 454 54.326 146.873 59.000 1.00 37.81 N
ATOM 15 C8 A B 454 55.096 146.377 57.971 1.00 36.94 C
ATOM 16 N7 A B 454 55.487 145.138 58.155 1.00 35.84 N
ATOM 17 C5 A B 454 54.932 144.795 59.380 1.00 36.40 C
ATOM 18 C6 A B 454 54.974 143.617 60.133 1.00 36.44 C
ATOM 19 N6 A B 454 55.599 142.508 59.732 1.00 39.51 N
ATOM 20 N1 A B 454 54.336 143.608 61.324 1.00 37.77 N
ATOM 21 C2 A B 454 53.685 144.714 61.712 1.00 36.55 C
ATOM 22 N3 A B 454 53.560 145.877 61.084 1.00 36.80 N
ATOM 23 C4 A B 454 54.218 145.853 59.911 1.00 36.28 C
ATOM 24 P G B 455 57.521 151.225 59.637 1.00 39.27 P
ATOM 25 OP1 G B 455 57.697 152.549 60.295 1.00 41.47 O
ATOM 26 OP2 G B 455 58.294 150.903 58.410 1.00 36.35 O
ATOM 27 O5' G B 455 57.826 150.098 60.717 1.00 38.21 O
TER
ATOM 2 P G A 463 58.826 134.329 59.591 1.00 28.41 P
ATOM 3 OP1 G A 463 58.162 133.329 60.453 1.00 29.26 O
ATOM 4 OP2 G A 463 59.014 134.024 58.149 1.00 26.67 O
ATOM 5 O5' G A 463 58.019 135.691 59.727 1.00 26.00 O
ATOM 6 C5' G A 463 57.642 136.197 61.020 1.00 27.53 C
ATOM 7 C4' G A 463 56.976 137.546 60.885 1.00 30.04 C
ATOM 8 O4' G A 463 57.946 138.550 60.482 1.00 32.94 O
ATOM 9 C3' G A 463 55.907 137.651 59.814 1.00 31.54 C
ATOM 10 O3' G A 463 54.680 137.071 60.218 1.00 31.57 O
ATOM 11 C2' G A 463 55.843 139.154 59.593 1.00 32.54 C
ATOM 12 O2' G A 463 55.204 139.848 60.643 1.00 35.19 O
ATOM 13 C1' G A 463 57.326 139.505 59.628 1.00 32.10 C
ATOM 14 N9 G A 463 57.907 139.371 58.298 1.00 33.25 N
ATOM 15 C8 G A 463 58.573 138.280 57.795 1.00 35.43 C
ATOM 16 N7 G A 463 58.944 138.432 56.553 1.00 35.73 N
ATOM 17 C5 G A 463 58.501 139.706 56.218 1.00 33.21 C
ATOM 18 C6 G A 463 58.601 140.416 54.996 1.00 33.26 C
ATOM 19 O6 G A 463 59.093 140.034 53.923 1.00 33.08 O
ATOM 20 N1 G A 463 58.039 141.687 55.095 1.00 30.37 N
ATOM 21 C2 G A 463 57.439 142.194 56.219 1.00 32.25 C
ATOM 22 N2 G A 463 56.956 143.439 56.124 1.00 30.31 N
ATOM 23 N3 G A 463 57.320 141.528 57.361 1.00 32.28 N
ATOM 24 C4 G A 463 57.873 140.303 57.289 1.00 32.40 C
ATOM 25 P A A 464 53.645 136.544 59.106 1.00 31.80 P
ATOM 26 OP1 A A 464 52.681 135.705 59.856 1.00 31.80 O
ATOM 27 OP2 A A 464 54.338 135.976 57.923 1.00 28.67 O
ATOM 28 O5' A A 464 52.940 137.889 58.636 1.00 30.41 O
TER
ATOM 1 O3' U B 453 55.347 149.038 53.644 1.00 39.99 O
ATOM 2 P A B 454 56.544 149.433 54.640 1.00 38.34 P
ATOM 3 OP1 A B 454 56.872 150.845 54.359 1.00 43.10 O
ATOM 4 OP2 A B 454 57.613 148.406 54.551 1.00 38.45 O
ATOM 5 O5' A B 454 55.869 149.373 56.079 1.00 36.41 O
ATOM 6 C5' A B 454 54.843 150.301 56.430 1.00 35.38 C
ATOM 7 C4' A B 454 54.349 150.038 57.830 1.00 37.63 C
ATOM 8 O4' A B 454 53.588 148.803 57.875 1.00 38.04 O
ATOM 9 C3' A B 454 55.411 149.846 58.896 1.00 37.30 C
ATOM 10 O3' A B 454 55.944 151.088 59.340 1.00 39.45 O
ATOM 11 C2' A B 454 54.624 149.131 59.987 1.00 36.87 C
ATOM 12 O2' A B 454 53.797 149.991 60.732 1.00 34.59 O
ATOM 13 C1' A B 454 53.734 148.205 59.155 1.00 37.66 C
ATOM 14 N9 A B 454 54.326 146.873 59.000 1.00 37.81 N
ATOM 15 C8 A B 454 55.096 146.377 57.971 1.00 36.94 C
ATOM 16 N7 A B 454 55.487 145.138 58.155 1.00 35.84 N
ATOM 17 C5 A B 454 54.932 144.795 59.380 1.00 36.40 C
ATOM 18 C6 A B 454 54.974 143.617 60.133 1.00 36.44 C
ATOM 19 N6 A B 454 55.599 142.508 59.732 1.00 39.51 N
ATOM 20 N1 A B 454 54.336 143.608 61.324 1.00 37.77 N
ATOM 21 C2 A B 454 53.685 144.714 61.712 1.00 36.55 C
ATOM 22 N3 A B 454 53.560 145.877 61.084 1.00 36.80 N
ATOM 23 C4 A B 454 54.218 145.853 59.911 1.00 36.28 C
ATOM 24 P G B 455 57.521 151.225 59.637 1.00 39.27 P
ATOM 25 OP1 G B 455 57.697 152.549 60.295 1.00 41.47 O
ATOM 26 OP2 G B 455 58.294 150.903 58.410 1.00 36.35 O
ATOM 27 O5' G B 455 57.826 150.098 60.717 1.00 38.21 O
TER
Atoms:
OP1: (58.162,133.329,60.453)
OP2: (59.014,134.024,58.149)
C3': (55.907,137.651,59.814)
C1': (57.326,139.505,59.628)
C5': (57.642,136.197,61.020)
O6: (59.093,140.034,53.923)
O4': (57.946,138.550,60.482)
C8: (58.573,138.280,57.795)
C2: (57.439,142.194,56.219)
C6: (58.601,140.416,54.996)
C5: (58.501,139.706,56.218)
C4: (57.873,140.303,57.289)
P: (58.826,134.329,59.591)
C4': (56.976,137.546,60.885)
C2': (55.843,139.154,59.593)
O2': (55.204,139.848,60.643)
N1: (58.039,141.687,55.095)
N2: (56.956,143.439,56.124)
N3: (57.320,141.528,57.361)
N7: (58.944,138.432,56.553)
N9: (57.907,139.371,58.298)
O5': (58.019,135.691,59.727)
O3': (54.680,137.071,60.218)
OP2: (59.014,134.024,58.149)
C3': (55.907,137.651,59.814)
C1': (57.326,139.505,59.628)
C5': (57.642,136.197,61.020)
O6: (59.093,140.034,53.923)
O4': (57.946,138.550,60.482)
C8: (58.573,138.280,57.795)
C2: (57.439,142.194,56.219)
C6: (58.601,140.416,54.996)
C5: (58.501,139.706,56.218)
C4: (57.873,140.303,57.289)
P: (58.826,134.329,59.591)
C4': (56.976,137.546,60.885)
C2': (55.843,139.154,59.593)
O2': (55.204,139.848,60.643)
N1: (58.039,141.687,55.095)
N2: (56.956,143.439,56.124)
N3: (57.320,141.528,57.361)
N7: (58.944,138.432,56.553)
N9: (57.907,139.371,58.298)
O5': (58.019,135.691,59.727)
O3': (54.680,137.071,60.218)
OP1: (56.872,150.845,54.359)
OP2: (57.613,148.406,54.551)
C3': (55.411,149.846,58.896)
C1': (53.734,148.205,59.155)
C5': (54.843,150.301,56.430)
O4': (53.588,148.803,57.875)
C8: (55.096,146.377,57.971)
O2': (53.797,149.991,60.732)
C6: (54.974,143.617,60.133)
C5: (54.932,144.795,59.380)
C4: (54.218,145.853,59.911)
P: (56.544,149.433,54.640)
C4': (54.349,150.038,57.830)
C2': (54.624,149.131,59.987)
C2: (53.685,144.714,61.712)
N1: (54.336,143.608,61.324)
N3: (53.560,145.877,61.084)
N6: (55.599,142.508,59.732)
N7: (55.487,145.138,58.155)
N9: (54.326,146.873,59.000)
O5': (55.869,149.373,56.079)
O3': (55.944,151.088,59.340)
OP2: (57.613,148.406,54.551)
C3': (55.411,149.846,58.896)
C1': (53.734,148.205,59.155)
C5': (54.843,150.301,56.430)
O4': (53.588,148.803,57.875)
C8: (55.096,146.377,57.971)
O2': (53.797,149.991,60.732)
C6: (54.974,143.617,60.133)
C5: (54.932,144.795,59.380)
C4: (54.218,145.853,59.911)
P: (56.544,149.433,54.640)
C4': (54.349,150.038,57.830)
C2': (54.624,149.131,59.987)
C2: (53.685,144.714,61.712)
N1: (54.336,143.608,61.324)
N3: (53.560,145.877,61.084)
N6: (55.599,142.508,59.732)
N7: (55.487,145.138,58.155)
N9: (54.326,146.873,59.000)
O5': (55.869,149.373,56.079)
O3': (55.944,151.088,59.340)
Image (generated by PyMOL):