Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MMS:D42:D47
Extra
PDB:
ATOM 1 O3' C A 41 12.485 4.523 -39.029 1.00 50.53 O
ATOM 2 P G A 42 11.977 4.012 -37.593 1.00 51.96 P
ATOM 3 OP1 G A 42 12.764 4.724 -36.553 1.00 64.77 O
ATOM 4 OP2 G A 42 11.975 2.526 -37.626 1.00 48.41 O
ATOM 5 O5' G A 42 10.458 4.492 -37.515 1.00 35.20 O
ATOM 6 C5' G A 42 10.122 5.886 -37.581 1.00 24.69 C
ATOM 7 C4' G A 42 8.630 6.056 -37.704 1.00 29.37 C
ATOM 8 O4' G A 42 8.164 5.435 -38.930 1.00 34.30 O
ATOM 9 C3' G A 42 7.808 5.387 -36.620 1.00 33.91 C
ATOM 10 O3' G A 42 7.738 6.175 -35.452 1.00 53.14 O
ATOM 11 C2' G A 42 6.454 5.194 -37.289 1.00 36.57 C
ATOM 12 O2' G A 42 5.628 6.344 -37.254 1.00 23.38 O
ATOM 13 C1' G A 42 6.871 4.878 -38.726 1.00 33.38 C
ATOM 14 N9 G A 42 6.940 3.436 -38.961 1.00 31.32 N
ATOM 15 C8 G A 42 8.073 2.656 -39.054 1.00 27.97 C
ATOM 16 N7 G A 42 7.812 1.389 -39.243 1.00 30.70 N
ATOM 17 C5 G A 42 6.424 1.326 -39.280 1.00 27.66 C
ATOM 18 C6 G A 42 5.563 0.215 -39.451 1.00 30.04 C
ATOM 19 O6 G A 42 5.866 -0.977 -39.608 1.00 42.76 O
ATOM 20 N1 G A 42 4.222 0.596 -39.422 1.00 21.84 N
ATOM 21 C2 G A 42 3.770 1.881 -39.247 1.00 13.29 C
ATOM 22 N2 G A 42 2.437 2.046 -39.237 1.00 19.33 N
ATOM 23 N3 G A 42 4.564 2.926 -39.091 1.00 16.91 N
ATOM 24 C4 G A 42 5.869 2.579 -39.115 1.00 23.30 C
ATOM 25 P U A 43 7.627 5.455 -34.022 1.00 46.64 P
ATOM 26 OP1 U A 43 7.774 6.516 -32.989 1.00 56.93 O
ATOM 27 OP2 U A 43 8.556 4.303 -34.026 1.00 32.38 O
ATOM 28 O5' U A 43 6.124 4.934 -33.989 1.00 26.86 O
TER
ATOM 1 O3' C B 46 -3.388 0.082 -39.870 1.00 44.58 O
ATOM 2 P A B 47 -2.688 0.785 -41.132 1.00 43.71 P
ATOM 3 OP1 A B 47 -3.449 0.343 -42.334 1.00 56.53 O
ATOM 4 OP2 A B 47 -1.216 0.563 -41.059 1.00 24.08 O
ATOM 5 O5' A B 47 -2.952 2.337 -40.908 1.00 42.07 O
ATOM 6 C5' A B 47 -4.281 2.842 -40.702 1.00 41.90 C
ATOM 7 C4' A B 47 -4.225 4.295 -40.292 1.00 49.33 C
ATOM 8 O4' A B 47 -3.523 4.414 -39.025 1.00 47.73 O
ATOM 9 C3' A B 47 -3.462 5.219 -41.229 1.00 50.90 C
ATOM 10 O3' A B 47 -4.263 5.645 -42.324 1.00 54.47 O
ATOM 11 C2' A B 47 -3.057 6.363 -40.303 1.00 47.39 C
ATOM 12 O2' A B 47 -4.104 7.289 -40.085 1.00 53.57 O
ATOM 13 C1' A B 47 -2.781 5.621 -38.995 1.00 36.88 C
ATOM 14 N9 A B 47 -1.365 5.289 -38.851 1.00 28.68 N
ATOM 15 C8 A B 47 -0.744 4.078 -39.051 1.00 36.76 C
ATOM 16 N7 A B 47 0.560 4.120 -38.906 1.00 27.01 N
ATOM 17 C5 A B 47 0.813 5.442 -38.575 1.00 32.11 C
ATOM 18 C6 A B 47 2.004 6.136 -38.311 1.00 39.08 C
ATOM 19 N6 A B 47 3.217 5.578 -38.364 1.00 35.79 N
ATOM 20 N1 A B 47 1.907 7.447 -37.996 1.00 37.08 N
ATOM 21 C2 A B 47 0.692 8.013 -37.969 1.00 35.02 C
ATOM 22 N3 A B 47 -0.498 7.470 -38.214 1.00 31.17 N
ATOM 23 C4 A B 47 -0.366 6.169 -38.516 1.00 35.12 C
ATOM 24 P G B 48 -3.598 5.799 -43.783 1.00 57.31 P
ATOM 25 OP1 G B 48 -4.589 6.508 -44.640 1.00 60.85 O
ATOM 26 OP2 G B 48 -3.062 4.481 -44.215 1.00 60.32 O
ATOM 27 O5' G B 48 -2.349 6.753 -43.537 1.00 41.11 O
TER
ATOM 2 P G A 42 11.977 4.012 -37.593 1.00 51.96 P
ATOM 3 OP1 G A 42 12.764 4.724 -36.553 1.00 64.77 O
ATOM 4 OP2 G A 42 11.975 2.526 -37.626 1.00 48.41 O
ATOM 5 O5' G A 42 10.458 4.492 -37.515 1.00 35.20 O
ATOM 6 C5' G A 42 10.122 5.886 -37.581 1.00 24.69 C
ATOM 7 C4' G A 42 8.630 6.056 -37.704 1.00 29.37 C
ATOM 8 O4' G A 42 8.164 5.435 -38.930 1.00 34.30 O
ATOM 9 C3' G A 42 7.808 5.387 -36.620 1.00 33.91 C
ATOM 10 O3' G A 42 7.738 6.175 -35.452 1.00 53.14 O
ATOM 11 C2' G A 42 6.454 5.194 -37.289 1.00 36.57 C
ATOM 12 O2' G A 42 5.628 6.344 -37.254 1.00 23.38 O
ATOM 13 C1' G A 42 6.871 4.878 -38.726 1.00 33.38 C
ATOM 14 N9 G A 42 6.940 3.436 -38.961 1.00 31.32 N
ATOM 15 C8 G A 42 8.073 2.656 -39.054 1.00 27.97 C
ATOM 16 N7 G A 42 7.812 1.389 -39.243 1.00 30.70 N
ATOM 17 C5 G A 42 6.424 1.326 -39.280 1.00 27.66 C
ATOM 18 C6 G A 42 5.563 0.215 -39.451 1.00 30.04 C
ATOM 19 O6 G A 42 5.866 -0.977 -39.608 1.00 42.76 O
ATOM 20 N1 G A 42 4.222 0.596 -39.422 1.00 21.84 N
ATOM 21 C2 G A 42 3.770 1.881 -39.247 1.00 13.29 C
ATOM 22 N2 G A 42 2.437 2.046 -39.237 1.00 19.33 N
ATOM 23 N3 G A 42 4.564 2.926 -39.091 1.00 16.91 N
ATOM 24 C4 G A 42 5.869 2.579 -39.115 1.00 23.30 C
ATOM 25 P U A 43 7.627 5.455 -34.022 1.00 46.64 P
ATOM 26 OP1 U A 43 7.774 6.516 -32.989 1.00 56.93 O
ATOM 27 OP2 U A 43 8.556 4.303 -34.026 1.00 32.38 O
ATOM 28 O5' U A 43 6.124 4.934 -33.989 1.00 26.86 O
TER
ATOM 1 O3' C B 46 -3.388 0.082 -39.870 1.00 44.58 O
ATOM 2 P A B 47 -2.688 0.785 -41.132 1.00 43.71 P
ATOM 3 OP1 A B 47 -3.449 0.343 -42.334 1.00 56.53 O
ATOM 4 OP2 A B 47 -1.216 0.563 -41.059 1.00 24.08 O
ATOM 5 O5' A B 47 -2.952 2.337 -40.908 1.00 42.07 O
ATOM 6 C5' A B 47 -4.281 2.842 -40.702 1.00 41.90 C
ATOM 7 C4' A B 47 -4.225 4.295 -40.292 1.00 49.33 C
ATOM 8 O4' A B 47 -3.523 4.414 -39.025 1.00 47.73 O
ATOM 9 C3' A B 47 -3.462 5.219 -41.229 1.00 50.90 C
ATOM 10 O3' A B 47 -4.263 5.645 -42.324 1.00 54.47 O
ATOM 11 C2' A B 47 -3.057 6.363 -40.303 1.00 47.39 C
ATOM 12 O2' A B 47 -4.104 7.289 -40.085 1.00 53.57 O
ATOM 13 C1' A B 47 -2.781 5.621 -38.995 1.00 36.88 C
ATOM 14 N9 A B 47 -1.365 5.289 -38.851 1.00 28.68 N
ATOM 15 C8 A B 47 -0.744 4.078 -39.051 1.00 36.76 C
ATOM 16 N7 A B 47 0.560 4.120 -38.906 1.00 27.01 N
ATOM 17 C5 A B 47 0.813 5.442 -38.575 1.00 32.11 C
ATOM 18 C6 A B 47 2.004 6.136 -38.311 1.00 39.08 C
ATOM 19 N6 A B 47 3.217 5.578 -38.364 1.00 35.79 N
ATOM 20 N1 A B 47 1.907 7.447 -37.996 1.00 37.08 N
ATOM 21 C2 A B 47 0.692 8.013 -37.969 1.00 35.02 C
ATOM 22 N3 A B 47 -0.498 7.470 -38.214 1.00 31.17 N
ATOM 23 C4 A B 47 -0.366 6.169 -38.516 1.00 35.12 C
ATOM 24 P G B 48 -3.598 5.799 -43.783 1.00 57.31 P
ATOM 25 OP1 G B 48 -4.589 6.508 -44.640 1.00 60.85 O
ATOM 26 OP2 G B 48 -3.062 4.481 -44.215 1.00 60.32 O
ATOM 27 O5' G B 48 -2.349 6.753 -43.537 1.00 41.11 O
TER
Atoms:
OP1: (12.764,4.724,-36.553)
OP2: (11.975,2.526,-37.626)
C3': (7.808,5.387,-36.620)
C1': (6.871,4.878,-38.726)
C5': (10.122,5.886,-37.581)
O6: (5.866,-0.977,-39.608)
O4': (8.164,5.435,-38.930)
C8: (8.073,2.656,-39.054)
C2: (3.770,1.881,-39.247)
C6: (5.563,0.215,-39.451)
C5: (6.424,1.326,-39.280)
C4: (5.869,2.579,-39.115)
P: (11.977,4.012,-37.593)
C4': (8.630,6.056,-37.704)
C2': (6.454,5.194,-37.289)
O2': (5.628,6.344,-37.254)
N1: (4.222,0.596,-39.422)
N2: (2.437,2.046,-39.237)
N3: (4.564,2.926,-39.091)
N7: (7.812,1.389,-39.243)
N9: (6.940,3.436,-38.961)
O5': (10.458,4.492,-37.515)
O3': (7.738,6.175,-35.452)
OP2: (11.975,2.526,-37.626)
C3': (7.808,5.387,-36.620)
C1': (6.871,4.878,-38.726)
C5': (10.122,5.886,-37.581)
O6: (5.866,-0.977,-39.608)
O4': (8.164,5.435,-38.930)
C8: (8.073,2.656,-39.054)
C2: (3.770,1.881,-39.247)
C6: (5.563,0.215,-39.451)
C5: (6.424,1.326,-39.280)
C4: (5.869,2.579,-39.115)
P: (11.977,4.012,-37.593)
C4': (8.630,6.056,-37.704)
C2': (6.454,5.194,-37.289)
O2': (5.628,6.344,-37.254)
N1: (4.222,0.596,-39.422)
N2: (2.437,2.046,-39.237)
N3: (4.564,2.926,-39.091)
N7: (7.812,1.389,-39.243)
N9: (6.940,3.436,-38.961)
O5': (10.458,4.492,-37.515)
O3': (7.738,6.175,-35.452)
OP1: (-3.449,0.343,-42.334)
OP2: (-1.216,0.563,-41.059)
C3': (-3.462,5.219,-41.229)
C1': (-2.781,5.621,-38.995)
C5': (-4.281,2.842,-40.702)
O4': (-3.523,4.414,-39.025)
C8: (-0.744,4.078,-39.051)
O2': (-4.104,7.289,-40.085)
C6: (2.004,6.136,-38.311)
C5: (0.813,5.442,-38.575)
C4: (-0.366,6.169,-38.516)
P: (-2.688,0.785,-41.132)
C4': (-4.225,4.295,-40.292)
C2': (-3.057,6.363,-40.303)
C2: (0.692,8.013,-37.969)
N1: (1.907,7.447,-37.996)
N3: (-0.498,7.470,-38.214)
N6: (3.217,5.578,-38.364)
N7: (0.560,4.120,-38.906)
N9: (-1.365,5.289,-38.851)
O5': (-2.952,2.337,-40.908)
O3': (-4.263,5.645,-42.324)
OP2: (-1.216,0.563,-41.059)
C3': (-3.462,5.219,-41.229)
C1': (-2.781,5.621,-38.995)
C5': (-4.281,2.842,-40.702)
O4': (-3.523,4.414,-39.025)
C8: (-0.744,4.078,-39.051)
O2': (-4.104,7.289,-40.085)
C6: (2.004,6.136,-38.311)
C5: (0.813,5.442,-38.575)
C4: (-0.366,6.169,-38.516)
P: (-2.688,0.785,-41.132)
C4': (-4.225,4.295,-40.292)
C2': (-3.057,6.363,-40.303)
C2: (0.692,8.013,-37.969)
N1: (1.907,7.447,-37.996)
N3: (-0.498,7.470,-38.214)
N6: (3.217,5.578,-38.364)
N7: (0.560,4.120,-38.906)
N9: (-1.365,5.289,-38.851)
O5': (-2.952,2.337,-40.908)
O3': (-4.263,5.645,-42.324)
Image (generated by PyMOL):