Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1361:1352
Extra
PDB:
ATOM 1 O3' G A 360 51.353 2.081 98.087 1.00 35.29 O
ATOM 2 P G A 361 52.919 1.740 98.102 1.00 36.47 P
ATOM 3 OP1 G A 361 53.302 1.274 96.774 1.00 36.18 O
ATOM 4 OP2 G A 361 53.146 0.831 99.232 1.00 36.68 O
ATOM 5 O5' G A 361 53.561 3.164 98.391 1.00 36.69 O
ATOM 6 C5' G A 361 53.670 4.135 97.365 1.00 36.56 C
ATOM 7 C4' G A 361 54.350 5.389 97.865 1.00 36.83 C
ATOM 8 O4' G A 361 53.684 5.862 99.074 1.00 37.10 O
ATOM 9 C3' G A 361 55.785 5.231 98.329 1.00 37.02 C
ATOM 10 O3' G A 361 56.702 5.137 97.280 1.00 36.86 O
ATOM 11 C2' G A 361 55.960 6.456 99.209 1.00 37.36 C
ATOM 12 O2' G A 361 55.970 7.641 98.426 1.00 37.31 O
ATOM 13 C1' G A 361 54.645 6.417 99.968 1.00 37.43 C
ATOM 14 N9 G A 361 54.756 5.549 101.142 1.00 37.63 N
ATOM 15 C8 G A 361 54.488 4.210 101.339 1.00 37.53 C
ATOM 16 N7 G A 361 54.750 3.780 102.551 1.00 37.81 N
ATOM 17 C5 G A 361 55.280 4.926 103.147 1.00 38.10 C
ATOM 18 C6 G A 361 55.822 5.178 104.436 1.00 38.50 C
ATOM 19 O6 G A 361 55.925 4.395 105.364 1.00 38.68 O
ATOM 20 N1 G A 361 56.251 6.488 104.619 1.00 38.72 N
ATOM 21 C2 G A 361 56.176 7.464 103.655 1.00 38.56 C
ATOM 22 N2 G A 361 56.622 8.691 103.951 1.00 38.82 N
ATOM 23 N3 G A 361 55.684 7.242 102.450 1.00 38.19 N
ATOM 24 C4 G A 361 55.274 5.990 102.278 1.00 37.99 C
ATOM 25 P A A 362 58.033 4.330 97.494 1.00 39.83 P
ATOM 26 OP1 A A 362 58.526 3.923 96.147 1.00 39.55 O
ATOM 27 OP2 A A 362 57.756 3.295 98.504 1.00 39.94 O
ATOM 28 O5' A A 362 58.981 5.440 98.124 1.00 40.16 O
TER
ATOM 1 O3' U B 351 59.278 12.924 107.975 1.00 37.46 O
ATOM 2 P A B 352 57.839 13.591 107.962 1.00 42.23 P
ATOM 3 OP1 A B 352 57.830 14.646 109.015 1.00 42.69 O
ATOM 4 OP2 A B 352 56.859 12.498 108.041 1.00 42.00 O
ATOM 5 O5' A B 352 57.803 14.269 106.530 1.00 41.92 O
ATOM 6 C5' A B 352 58.605 15.378 106.250 1.00 42.09 C
ATOM 7 C4' A B 352 58.523 15.694 104.819 1.00 41.74 C
ATOM 8 O4' A B 352 59.005 14.576 104.069 1.00 41.41 O
ATOM 9 C3' A B 352 57.134 15.865 104.314 1.00 41.51 C
ATOM 10 O3' A B 352 56.620 17.128 104.602 1.00 41.75 O
ATOM 11 C2' A B 352 57.262 15.559 102.825 1.00 41.08 C
ATOM 12 O2' A B 352 57.670 16.689 102.096 1.00 41.12 O
ATOM 13 C1' A B 352 58.389 14.548 102.815 1.00 41.02 C
ATOM 14 N9 A B 352 57.899 13.204 102.570 1.00 40.72 N
ATOM 15 C8 A B 352 57.723 12.171 103.432 1.00 40.78 C
ATOM 16 N7 A B 352 57.246 11.106 102.845 1.00 40.44 N
ATOM 17 C5 A B 352 57.106 11.507 101.525 1.00 40.15 C
ATOM 18 C6 A B 352 56.683 10.860 100.392 1.00 39.75 C
ATOM 19 N6 A B 352 56.304 9.609 100.428 1.00 39.57 N
ATOM 20 N1 A B 352 56.668 11.511 99.246 1.00 39.57 N
ATOM 21 C2 A B 352 57.058 12.758 99.224 1.00 39.77 C
ATOM 22 N3 A B 352 57.497 13.515 100.219 1.00 40.15 N
ATOM 23 C4 A B 352 57.484 12.802 101.350 1.00 40.32 C
ATOM 24 P C B 353 55.092 17.278 104.965 1.00 41.87 P
ATOM 25 OP1 C B 353 54.819 18.740 105.099 1.00 42.14 O
ATOM 26 OP2 C B 353 54.815 16.401 106.122 1.00 42.01 O
ATOM 27 O5' C B 353 54.386 16.668 103.684 1.00 41.37 O
TER
ATOM 2 P G A 361 52.919 1.740 98.102 1.00 36.47 P
ATOM 3 OP1 G A 361 53.302 1.274 96.774 1.00 36.18 O
ATOM 4 OP2 G A 361 53.146 0.831 99.232 1.00 36.68 O
ATOM 5 O5' G A 361 53.561 3.164 98.391 1.00 36.69 O
ATOM 6 C5' G A 361 53.670 4.135 97.365 1.00 36.56 C
ATOM 7 C4' G A 361 54.350 5.389 97.865 1.00 36.83 C
ATOM 8 O4' G A 361 53.684 5.862 99.074 1.00 37.10 O
ATOM 9 C3' G A 361 55.785 5.231 98.329 1.00 37.02 C
ATOM 10 O3' G A 361 56.702 5.137 97.280 1.00 36.86 O
ATOM 11 C2' G A 361 55.960 6.456 99.209 1.00 37.36 C
ATOM 12 O2' G A 361 55.970 7.641 98.426 1.00 37.31 O
ATOM 13 C1' G A 361 54.645 6.417 99.968 1.00 37.43 C
ATOM 14 N9 G A 361 54.756 5.549 101.142 1.00 37.63 N
ATOM 15 C8 G A 361 54.488 4.210 101.339 1.00 37.53 C
ATOM 16 N7 G A 361 54.750 3.780 102.551 1.00 37.81 N
ATOM 17 C5 G A 361 55.280 4.926 103.147 1.00 38.10 C
ATOM 18 C6 G A 361 55.822 5.178 104.436 1.00 38.50 C
ATOM 19 O6 G A 361 55.925 4.395 105.364 1.00 38.68 O
ATOM 20 N1 G A 361 56.251 6.488 104.619 1.00 38.72 N
ATOM 21 C2 G A 361 56.176 7.464 103.655 1.00 38.56 C
ATOM 22 N2 G A 361 56.622 8.691 103.951 1.00 38.82 N
ATOM 23 N3 G A 361 55.684 7.242 102.450 1.00 38.19 N
ATOM 24 C4 G A 361 55.274 5.990 102.278 1.00 37.99 C
ATOM 25 P A A 362 58.033 4.330 97.494 1.00 39.83 P
ATOM 26 OP1 A A 362 58.526 3.923 96.147 1.00 39.55 O
ATOM 27 OP2 A A 362 57.756 3.295 98.504 1.00 39.94 O
ATOM 28 O5' A A 362 58.981 5.440 98.124 1.00 40.16 O
TER
ATOM 1 O3' U B 351 59.278 12.924 107.975 1.00 37.46 O
ATOM 2 P A B 352 57.839 13.591 107.962 1.00 42.23 P
ATOM 3 OP1 A B 352 57.830 14.646 109.015 1.00 42.69 O
ATOM 4 OP2 A B 352 56.859 12.498 108.041 1.00 42.00 O
ATOM 5 O5' A B 352 57.803 14.269 106.530 1.00 41.92 O
ATOM 6 C5' A B 352 58.605 15.378 106.250 1.00 42.09 C
ATOM 7 C4' A B 352 58.523 15.694 104.819 1.00 41.74 C
ATOM 8 O4' A B 352 59.005 14.576 104.069 1.00 41.41 O
ATOM 9 C3' A B 352 57.134 15.865 104.314 1.00 41.51 C
ATOM 10 O3' A B 352 56.620 17.128 104.602 1.00 41.75 O
ATOM 11 C2' A B 352 57.262 15.559 102.825 1.00 41.08 C
ATOM 12 O2' A B 352 57.670 16.689 102.096 1.00 41.12 O
ATOM 13 C1' A B 352 58.389 14.548 102.815 1.00 41.02 C
ATOM 14 N9 A B 352 57.899 13.204 102.570 1.00 40.72 N
ATOM 15 C8 A B 352 57.723 12.171 103.432 1.00 40.78 C
ATOM 16 N7 A B 352 57.246 11.106 102.845 1.00 40.44 N
ATOM 17 C5 A B 352 57.106 11.507 101.525 1.00 40.15 C
ATOM 18 C6 A B 352 56.683 10.860 100.392 1.00 39.75 C
ATOM 19 N6 A B 352 56.304 9.609 100.428 1.00 39.57 N
ATOM 20 N1 A B 352 56.668 11.511 99.246 1.00 39.57 N
ATOM 21 C2 A B 352 57.058 12.758 99.224 1.00 39.77 C
ATOM 22 N3 A B 352 57.497 13.515 100.219 1.00 40.15 N
ATOM 23 C4 A B 352 57.484 12.802 101.350 1.00 40.32 C
ATOM 24 P C B 353 55.092 17.278 104.965 1.00 41.87 P
ATOM 25 OP1 C B 353 54.819 18.740 105.099 1.00 42.14 O
ATOM 26 OP2 C B 353 54.815 16.401 106.122 1.00 42.01 O
ATOM 27 O5' C B 353 54.386 16.668 103.684 1.00 41.37 O
TER
Atoms:
OP1: (53.302,1.274,96.774)
OP2: (53.146,0.831,99.232)
C3': (55.785,5.231,98.329)
C1': (54.645,6.417,99.968)
C5': (53.670,4.135,97.365)
O6: (55.925,4.395,105.364)
O4': (53.684,5.862,99.074)
C8: (54.488,4.210,101.339)
C2: (56.176,7.464,103.655)
C6: (55.822,5.178,104.436)
C5: (55.280,4.926,103.147)
C4: (55.274,5.990,102.278)
P: (52.919,1.740,98.102)
C4': (54.350,5.389,97.865)
C2': (55.960,6.456,99.209)
O2': (55.970,7.641,98.426)
N1: (56.251,6.488,104.619)
N2: (56.622,8.691,103.951)
N3: (55.684,7.242,102.450)
N7: (54.750,3.780,102.551)
N9: (54.756,5.549,101.142)
O5': (53.561,3.164,98.391)
O3': (56.702,5.137,97.280)
OP2: (53.146,0.831,99.232)
C3': (55.785,5.231,98.329)
C1': (54.645,6.417,99.968)
C5': (53.670,4.135,97.365)
O6: (55.925,4.395,105.364)
O4': (53.684,5.862,99.074)
C8: (54.488,4.210,101.339)
C2: (56.176,7.464,103.655)
C6: (55.822,5.178,104.436)
C5: (55.280,4.926,103.147)
C4: (55.274,5.990,102.278)
P: (52.919,1.740,98.102)
C4': (54.350,5.389,97.865)
C2': (55.960,6.456,99.209)
O2': (55.970,7.641,98.426)
N1: (56.251,6.488,104.619)
N2: (56.622,8.691,103.951)
N3: (55.684,7.242,102.450)
N7: (54.750,3.780,102.551)
N9: (54.756,5.549,101.142)
O5': (53.561,3.164,98.391)
O3': (56.702,5.137,97.280)
OP1: (57.830,14.646,109.015)
OP2: (56.859,12.498,108.041)
C3': (57.134,15.865,104.314)
C1': (58.389,14.548,102.815)
C5': (58.605,15.378,106.250)
O4': (59.005,14.576,104.069)
C8: (57.723,12.171,103.432)
O2': (57.670,16.689,102.096)
C6: (56.683,10.860,100.392)
C5: (57.106,11.507,101.525)
C4: (57.484,12.802,101.350)
P: (57.839,13.591,107.962)
C4': (58.523,15.694,104.819)
C2': (57.262,15.559,102.825)
C2: (57.058,12.758,99.224)
N1: (56.668,11.511,99.246)
N3: (57.497,13.515,100.219)
N6: (56.304,9.609,100.428)
N7: (57.246,11.106,102.845)
N9: (57.899,13.204,102.570)
O5': (57.803,14.269,106.530)
O3': (56.620,17.128,104.602)
OP2: (56.859,12.498,108.041)
C3': (57.134,15.865,104.314)
C1': (58.389,14.548,102.815)
C5': (58.605,15.378,106.250)
O4': (59.005,14.576,104.069)
C8: (57.723,12.171,103.432)
O2': (57.670,16.689,102.096)
C6: (56.683,10.860,100.392)
C5: (57.106,11.507,101.525)
C4: (57.484,12.802,101.350)
P: (57.839,13.591,107.962)
C4': (58.523,15.694,104.819)
C2': (57.262,15.559,102.825)
C2: (57.058,12.758,99.224)
N1: (56.668,11.511,99.246)
N3: (57.497,13.515,100.219)
N6: (56.304,9.609,100.428)
N7: (57.246,11.106,102.845)
N9: (57.899,13.204,102.570)
O5': (57.803,14.269,106.530)
O3': (56.620,17.128,104.602)
Image (generated by PyMOL):