ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1F:A564:A567

Extra

PDB:
ATOM 1 O3' C A 563 -18.884 133.707 235.674 1.00141.40 O
ATOM 2 P G A 564 -18.498 133.561 237.223 1.00209.21 P
ATOM 3 OP1 G A 564 -17.487 134.595 237.527 1.00180.49 O
ATOM 4 OP2 G A 564 -18.198 132.143 237.514 1.00170.29 O
ATOM 5 O5' G A 564 -19.877 133.911 237.958 1.00182.13 O
ATOM 6 C5' G A 564 -20.636 135.072 237.612 1.00175.14 C
ATOM 7 C4' G A 564 -22.089 134.947 238.051 1.00187.57 C
ATOM 8 O4' G A 564 -22.769 133.983 237.206 1.00186.20 O
ATOM 9 C3' G A 564 -22.357 134.403 239.451 1.00190.61 C
ATOM 10 O3' G A 564 -22.178 135.374 240.480 1.00200.35 O
ATOM 11 C2' G A 564 -23.831 134.046 239.312 1.00185.70 C
ATOM 12 O2' G A 564 -24.668 135.184 239.304 1.00187.63 O
ATOM 13 C1' G A 564 -23.830 133.392 237.938 1.00179.25 C
ATOM 14 N9 G A 564 -23.654 131.946 238.030 1.00178.56 N
ATOM 15 C8 G A 564 -22.483 131.225 238.074 1.00171.24 C
ATOM 16 N7 G A 564 -22.668 129.934 238.164 1.00168.34 N
ATOM 17 C5 G A 564 -24.051 129.797 238.188 1.00174.95 C
ATOM 18 C6 G A 564 -24.853 128.636 238.276 1.00164.56 C
ATOM 19 O6 G A 564 -24.481 127.456 238.352 1.00164.60 O
ATOM 20 N1 G A 564 -26.212 128.951 238.268 1.00172.72 N
ATOM 21 C2 G A 564 -26.731 130.223 238.185 1.00174.24 C
ATOM 22 N2 G A 564 -28.066 130.327 238.190 1.00168.86 N
ATOM 23 N3 G A 564 -25.993 131.318 238.102 1.00170.38 N
ATOM 24 C4 G A 564 -24.669 131.026 238.109 1.00181.08 C
ATOM 25 P C A 565 -21.866 134.891 241.977 1.00238.93 P
ATOM 26 OP1 C A 565 -21.957 136.077 242.856 1.00193.78 O
ATOM 27 OP2 C A 565 -20.620 134.093 241.945 1.00209.49 O
ATOM 28 O5' C A 565 -23.070 133.898 242.341 1.00201.96 O
TER

ATOM 1 O3' A B 566 -31.447 129.954 242.128 1.00165.34 O
ATOM 2 P A B 567 -31.648 128.532 241.433 1.00180.12 P
ATOM 3 OP1 A B 567 -32.320 127.654 242.413 1.00167.23 O
ATOM 4 OP2 A B 567 -30.361 128.130 240.824 1.00161.36 O
ATOM 5 O5' A B 567 -32.664 128.850 240.242 1.00159.57 O
ATOM 6 C5' A B 567 -34.029 129.129 240.527 1.00159.90 C
ATOM 7 C4' A B 567 -34.445 130.431 239.870 1.00161.07 C
ATOM 8 O4' A B 567 -33.632 131.507 240.406 1.00160.88 O
ATOM 9 C3' A B 567 -34.202 130.535 238.371 1.00158.80 C
ATOM 10 O3' A B 567 -35.227 129.922 237.607 1.00165.56 O
ATOM 11 C2' A B 567 -34.235 132.047 238.187 1.00155.41 C
ATOM 12 O2' A B 567 -35.553 132.562 238.204 1.00153.72 O
ATOM 13 C1' A B 567 -33.442 132.502 239.409 1.00158.32 C
ATOM 14 N9 A B 567 -32.012 132.639 239.134 1.00161.32 N
ATOM 15 C8 A B 567 -31.102 131.621 239.091 1.00156.24 C
ATOM 16 N7 A B 567 -29.879 132.008 238.823 1.00154.95 N
ATOM 17 C5 A B 567 -29.994 133.378 238.667 1.00166.05 C
ATOM 18 C6 A B 567 -29.042 134.371 238.364 1.00164.65 C
ATOM 19 N6 A B 567 -27.749 134.090 238.164 1.00156.32 N
ATOM 20 N1 A B 567 -29.472 135.650 238.278 1.00162.24 N
ATOM 21 C2 A B 567 -30.770 135.904 238.483 1.00151.00 C
ATOM 22 N3 A B 567 -31.757 135.055 238.774 1.00157.46 N
ATOM 23 C4 A B 567 -31.301 133.791 238.853 1.00168.14 C
ATOM 24 P G B 568 -34.844 129.236 236.211 1.00173.27 P
ATOM 25 OP1 G B 568 -36.117 128.965 235.504 1.00150.47 O
ATOM 26 OP2 G B 568 -33.936 128.108 236.520 1.00152.26 O
ATOM 27 O5' G B 568 -33.989 130.354 235.421 1.00154.96 O
TER

Atoms:
OP1: (-17.487,134.595,237.527)
OP2: (-18.198,132.143,237.514)
C3': (-22.357,134.403,239.451)
C1': (-23.830,133.392,237.938)
C5': (-20.636,135.072,237.612)
O6: (-24.481,127.456,238.352)
O4': (-22.769,133.983,237.206)
C8: (-22.483,131.225,238.074)
C2: (-26.731,130.223,238.185)
C6: (-24.853,128.636,238.276)
C5: (-24.051,129.797,238.188)
C4: (-24.669,131.026,238.109)
P: (-18.498,133.561,237.223)
C4': (-22.089,134.947,238.051)
C2': (-23.831,134.046,239.312)
O2': (-24.668,135.184,239.304)
N1: (-26.212,128.951,238.268)
N2: (-28.066,130.327,238.190)
N3: (-25.993,131.318,238.102)
N7: (-22.668,129.934,238.164)
N9: (-23.654,131.946,238.030)
O5': (-19.877,133.911,237.958)
O3': (-22.178,135.374,240.480)
OP1: (-32.320,127.654,242.413)
OP2: (-30.361,128.130,240.824)
C3': (-34.202,130.535,238.371)
C1': (-33.442,132.502,239.409)
C5': (-34.029,129.129,240.527)
O4': (-33.632,131.507,240.406)
C8: (-31.102,131.621,239.091)
O2': (-35.553,132.562,238.204)
C6: (-29.042,134.371,238.364)
C5: (-29.994,133.378,238.667)
C4: (-31.301,133.791,238.853)
P: (-31.648,128.532,241.433)
C4': (-34.445,130.431,239.870)
C2': (-34.235,132.047,238.187)
C2: (-30.770,135.904,238.483)
N1: (-29.472,135.650,238.278)
N3: (-31.757,135.055,238.774)
N6: (-27.749,134.090,238.164)
N7: (-29.879,132.008,238.823)
N9: (-32.012,132.639,239.134)
O5': (-32.664,128.850,240.242)
O3': (-35.227,129.922,237.607)
Image (generated by PyMOL):
PyMOL image
show in jmol