Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SA9:D3:C4
Extra
PDB:
ATOM 1 O3' C A 2 -9.589 54.650 50.503 1.00 64.99 O
ATOM 2 P G A 3 -10.110 53.231 51.027 1.00 68.70 P
ATOM 3 OP1 G A 3 -8.947 52.304 51.034 1.00 69.64 O
ATOM 4 OP2 G A 3 -11.342 52.867 50.264 1.00 64.31 O
ATOM 5 O5' G A 3 -10.523 53.544 52.534 1.00 68.51 O
ATOM 6 C5' G A 3 -9.550 53.969 53.488 1.00 66.68 C
ATOM 7 C4' G A 3 -10.189 54.137 54.848 1.00 65.24 C
ATOM 8 O4' G A 3 -11.130 55.243 54.823 1.00 65.69 O
ATOM 9 C3' G A 3 -11.016 52.960 55.332 1.00 65.39 C
ATOM 10 O3' G A 3 -10.179 51.960 55.910 1.00 61.98 O
ATOM 11 C2' G A 3 -11.932 53.616 56.358 1.00 65.74 C
ATOM 12 O2' G A 3 -11.271 53.822 57.586 1.00 69.11 O
ATOM 13 C1' G A 3 -12.204 54.974 55.707 1.00 66.25 C
ATOM 14 N9 G A 3 -13.449 55.036 54.950 1.00 67.62 N
ATOM 15 C8 G A 3 -13.612 54.763 53.617 1.00 68.32 C
ATOM 16 N7 G A 3 -14.841 54.912 53.211 1.00 68.19 N
ATOM 17 C5 G A 3 -15.531 55.302 54.345 1.00 69.48 C
ATOM 18 C6 G A 3 -16.892 55.614 54.515 1.00 72.30 C
ATOM 19 O6 G A 3 -17.787 55.607 53.670 1.00 78.70 O
ATOM 20 N1 G A 3 -17.182 55.969 55.825 1.00 71.91 N
ATOM 21 C2 G A 3 -16.270 56.030 56.839 1.00 72.48 C
ATOM 22 N2 G A 3 -16.751 56.409 58.029 1.00 75.22 N
ATOM 23 N3 G A 3 -14.984 55.748 56.694 1.00 71.87 N
ATOM 24 C4 G A 3 -14.687 55.396 55.425 1.00 69.31 C
ATOM 25 P A A 4 -10.815 50.560 56.377 1.00 58.97 P
ATOM 26 OP1 A A 4 -10.004 49.461 55.808 1.00 57.84 O
ATOM 27 OP2 A A 4 -12.280 50.611 56.105 1.00 57.28 O
ATOM 28 O5' A A 4 -10.606 50.579 57.958 1.00 57.23 O
TER
ATOM 1 O3' G B 3 -21.309 56.692 61.064 1.00 71.56 O
ATOM 2 P A B 4 -21.171 58.124 60.349 1.00 73.63 P
ATOM 3 OP1 A B 4 -22.545 58.687 60.207 1.00 72.89 O
ATOM 4 OP2 A B 4 -20.303 57.949 59.147 1.00 74.03 O
ATOM 5 O5' A B 4 -20.343 59.004 61.386 1.00 70.47 O
ATOM 6 C5' A B 4 -20.631 58.940 62.767 1.00 64.02 C
ATOM 7 C4' A B 4 -19.373 58.681 63.552 1.00 59.68 C
ATOM 8 O4' A B 4 -18.809 57.381 63.241 1.00 56.78 O
ATOM 9 C3' A B 4 -18.192 59.590 63.301 1.00 57.52 C
ATOM 10 O3' A B 4 -18.362 60.840 63.933 1.00 56.20 O
ATOM 11 C2' A B 4 -17.086 58.817 63.995 1.00 57.44 C
ATOM 12 O2' A B 4 -17.194 58.970 65.390 1.00 62.43 O
ATOM 13 C1' A B 4 -17.457 57.376 63.655 1.00 56.72 C
ATOM 14 N9 A B 4 -16.614 56.835 62.601 1.00 56.59 N
ATOM 15 C8 A B 4 -16.903 56.557 61.290 1.00 57.72 C
ATOM 16 N7 A B 4 -15.874 56.096 60.612 1.00 57.93 N
ATOM 17 C5 A B 4 -14.843 56.081 61.539 1.00 56.23 C
ATOM 18 C6 A B 4 -13.494 55.708 61.449 1.00 55.77 C
ATOM 19 N6 A B 4 -12.935 55.229 60.342 1.00 56.16 N
ATOM 20 N1 A B 4 -12.734 55.815 62.560 1.00 55.62 N
ATOM 21 C2 A B 4 -13.305 56.279 63.682 1.00 55.98 C
ATOM 22 N3 A B 4 -14.564 56.659 63.892 1.00 54.75 N
ATOM 23 C4 A B 4 -15.284 56.541 62.765 1.00 56.01 C
ATOM 24 P G B 5 -17.644 62.130 63.316 1.00 58.87 P
ATOM 25 OP1 G B 5 -17.539 63.189 64.348 1.00 60.34 O
ATOM 26 OP2 G B 5 -18.353 62.413 62.045 1.00 61.79 O
ATOM 27 O5' G B 5 -16.168 61.643 62.988 1.00 53.67 O
TER
ATOM 2 P G A 3 -10.110 53.231 51.027 1.00 68.70 P
ATOM 3 OP1 G A 3 -8.947 52.304 51.034 1.00 69.64 O
ATOM 4 OP2 G A 3 -11.342 52.867 50.264 1.00 64.31 O
ATOM 5 O5' G A 3 -10.523 53.544 52.534 1.00 68.51 O
ATOM 6 C5' G A 3 -9.550 53.969 53.488 1.00 66.68 C
ATOM 7 C4' G A 3 -10.189 54.137 54.848 1.00 65.24 C
ATOM 8 O4' G A 3 -11.130 55.243 54.823 1.00 65.69 O
ATOM 9 C3' G A 3 -11.016 52.960 55.332 1.00 65.39 C
ATOM 10 O3' G A 3 -10.179 51.960 55.910 1.00 61.98 O
ATOM 11 C2' G A 3 -11.932 53.616 56.358 1.00 65.74 C
ATOM 12 O2' G A 3 -11.271 53.822 57.586 1.00 69.11 O
ATOM 13 C1' G A 3 -12.204 54.974 55.707 1.00 66.25 C
ATOM 14 N9 G A 3 -13.449 55.036 54.950 1.00 67.62 N
ATOM 15 C8 G A 3 -13.612 54.763 53.617 1.00 68.32 C
ATOM 16 N7 G A 3 -14.841 54.912 53.211 1.00 68.19 N
ATOM 17 C5 G A 3 -15.531 55.302 54.345 1.00 69.48 C
ATOM 18 C6 G A 3 -16.892 55.614 54.515 1.00 72.30 C
ATOM 19 O6 G A 3 -17.787 55.607 53.670 1.00 78.70 O
ATOM 20 N1 G A 3 -17.182 55.969 55.825 1.00 71.91 N
ATOM 21 C2 G A 3 -16.270 56.030 56.839 1.00 72.48 C
ATOM 22 N2 G A 3 -16.751 56.409 58.029 1.00 75.22 N
ATOM 23 N3 G A 3 -14.984 55.748 56.694 1.00 71.87 N
ATOM 24 C4 G A 3 -14.687 55.396 55.425 1.00 69.31 C
ATOM 25 P A A 4 -10.815 50.560 56.377 1.00 58.97 P
ATOM 26 OP1 A A 4 -10.004 49.461 55.808 1.00 57.84 O
ATOM 27 OP2 A A 4 -12.280 50.611 56.105 1.00 57.28 O
ATOM 28 O5' A A 4 -10.606 50.579 57.958 1.00 57.23 O
TER
ATOM 1 O3' G B 3 -21.309 56.692 61.064 1.00 71.56 O
ATOM 2 P A B 4 -21.171 58.124 60.349 1.00 73.63 P
ATOM 3 OP1 A B 4 -22.545 58.687 60.207 1.00 72.89 O
ATOM 4 OP2 A B 4 -20.303 57.949 59.147 1.00 74.03 O
ATOM 5 O5' A B 4 -20.343 59.004 61.386 1.00 70.47 O
ATOM 6 C5' A B 4 -20.631 58.940 62.767 1.00 64.02 C
ATOM 7 C4' A B 4 -19.373 58.681 63.552 1.00 59.68 C
ATOM 8 O4' A B 4 -18.809 57.381 63.241 1.00 56.78 O
ATOM 9 C3' A B 4 -18.192 59.590 63.301 1.00 57.52 C
ATOM 10 O3' A B 4 -18.362 60.840 63.933 1.00 56.20 O
ATOM 11 C2' A B 4 -17.086 58.817 63.995 1.00 57.44 C
ATOM 12 O2' A B 4 -17.194 58.970 65.390 1.00 62.43 O
ATOM 13 C1' A B 4 -17.457 57.376 63.655 1.00 56.72 C
ATOM 14 N9 A B 4 -16.614 56.835 62.601 1.00 56.59 N
ATOM 15 C8 A B 4 -16.903 56.557 61.290 1.00 57.72 C
ATOM 16 N7 A B 4 -15.874 56.096 60.612 1.00 57.93 N
ATOM 17 C5 A B 4 -14.843 56.081 61.539 1.00 56.23 C
ATOM 18 C6 A B 4 -13.494 55.708 61.449 1.00 55.77 C
ATOM 19 N6 A B 4 -12.935 55.229 60.342 1.00 56.16 N
ATOM 20 N1 A B 4 -12.734 55.815 62.560 1.00 55.62 N
ATOM 21 C2 A B 4 -13.305 56.279 63.682 1.00 55.98 C
ATOM 22 N3 A B 4 -14.564 56.659 63.892 1.00 54.75 N
ATOM 23 C4 A B 4 -15.284 56.541 62.765 1.00 56.01 C
ATOM 24 P G B 5 -17.644 62.130 63.316 1.00 58.87 P
ATOM 25 OP1 G B 5 -17.539 63.189 64.348 1.00 60.34 O
ATOM 26 OP2 G B 5 -18.353 62.413 62.045 1.00 61.79 O
ATOM 27 O5' G B 5 -16.168 61.643 62.988 1.00 53.67 O
TER
Atoms:
OP1: (-8.947,52.304,51.034)
OP2: (-11.342,52.867,50.264)
C3': (-11.016,52.960,55.332)
C1': (-12.204,54.974,55.707)
C5': (-9.550,53.969,53.488)
O6: (-17.787,55.607,53.670)
O4': (-11.130,55.243,54.823)
C8: (-13.612,54.763,53.617)
C2: (-16.270,56.030,56.839)
C6: (-16.892,55.614,54.515)
C5: (-15.531,55.302,54.345)
C4: (-14.687,55.396,55.425)
P: (-10.110,53.231,51.027)
C4': (-10.189,54.137,54.848)
C2': (-11.932,53.616,56.358)
O2': (-11.271,53.822,57.586)
N1: (-17.182,55.969,55.825)
N2: (-16.751,56.409,58.029)
N3: (-14.984,55.748,56.694)
N7: (-14.841,54.912,53.211)
N9: (-13.449,55.036,54.950)
O5': (-10.523,53.544,52.534)
O3': (-10.179,51.960,55.910)
OP2: (-11.342,52.867,50.264)
C3': (-11.016,52.960,55.332)
C1': (-12.204,54.974,55.707)
C5': (-9.550,53.969,53.488)
O6: (-17.787,55.607,53.670)
O4': (-11.130,55.243,54.823)
C8: (-13.612,54.763,53.617)
C2: (-16.270,56.030,56.839)
C6: (-16.892,55.614,54.515)
C5: (-15.531,55.302,54.345)
C4: (-14.687,55.396,55.425)
P: (-10.110,53.231,51.027)
C4': (-10.189,54.137,54.848)
C2': (-11.932,53.616,56.358)
O2': (-11.271,53.822,57.586)
N1: (-17.182,55.969,55.825)
N2: (-16.751,56.409,58.029)
N3: (-14.984,55.748,56.694)
N7: (-14.841,54.912,53.211)
N9: (-13.449,55.036,54.950)
O5': (-10.523,53.544,52.534)
O3': (-10.179,51.960,55.910)
OP1: (-22.545,58.687,60.207)
OP2: (-20.303,57.949,59.147)
C3': (-18.192,59.590,63.301)
C1': (-17.457,57.376,63.655)
C5': (-20.631,58.940,62.767)
O4': (-18.809,57.381,63.241)
C8: (-16.903,56.557,61.290)
O2': (-17.194,58.970,65.390)
C6: (-13.494,55.708,61.449)
C5: (-14.843,56.081,61.539)
C4: (-15.284,56.541,62.765)
P: (-21.171,58.124,60.349)
C4': (-19.373,58.681,63.552)
C2': (-17.086,58.817,63.995)
C2: (-13.305,56.279,63.682)
N1: (-12.734,55.815,62.560)
N3: (-14.564,56.659,63.892)
N6: (-12.935,55.229,60.342)
N7: (-15.874,56.096,60.612)
N9: (-16.614,56.835,62.601)
O5': (-20.343,59.004,61.386)
O3': (-18.362,60.840,63.933)
OP2: (-20.303,57.949,59.147)
C3': (-18.192,59.590,63.301)
C1': (-17.457,57.376,63.655)
C5': (-20.631,58.940,62.767)
O4': (-18.809,57.381,63.241)
C8: (-16.903,56.557,61.290)
O2': (-17.194,58.970,65.390)
C6: (-13.494,55.708,61.449)
C5: (-14.843,56.081,61.539)
C4: (-15.284,56.541,62.765)
P: (-21.171,58.124,60.349)
C4': (-19.373,58.681,63.552)
C2': (-17.086,58.817,63.995)
C2: (-13.305,56.279,63.682)
N1: (-12.734,55.815,62.560)
N3: (-14.564,56.659,63.892)
N6: (-12.935,55.229,60.342)
N7: (-15.874,56.096,60.612)
N9: (-16.614,56.835,62.601)
O5': (-20.343,59.004,61.386)
O3': (-18.362,60.840,63.933)
Image (generated by PyMOL):