Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2540:A2533
Extra
PDB:
ATOM 1 O3' G A2539 83.684 128.415 160.725 1.00 77.24 O
ATOM 2 P G A2540 82.591 129.538 160.315 1.00 75.54 P
ATOM 3 OP1 G A2540 82.311 129.326 158.872 1.00 75.41 O
ATOM 4 OP2 G A2540 83.010 130.883 160.784 1.00 76.02 O
ATOM 5 O5' G A2540 81.281 129.147 161.127 1.00 73.87 O
ATOM 6 C5' G A2540 80.403 128.104 160.673 1.00 71.98 C
ATOM 7 C4' G A2540 79.220 128.007 161.597 1.00 71.52 C
ATOM 8 O4' G A2540 79.651 127.615 162.924 1.00 71.97 O
ATOM 9 C3' G A2540 78.525 129.333 161.819 1.00 70.29 C
ATOM 10 O3' G A2540 77.644 129.619 160.753 1.00 68.49 O
ATOM 11 C2' G A2540 77.836 129.124 163.157 1.00 71.83 C
ATOM 12 O2' G A2540 76.640 128.374 163.081 1.00 71.11 O
ATOM 13 C1' G A2540 78.899 128.318 163.901 1.00 73.36 C
ATOM 14 N9 G A2540 79.810 129.181 164.648 1.00 76.10 N
ATOM 15 C8 G A2540 81.043 129.641 164.239 1.00 77.47 C
ATOM 16 N7 G A2540 81.615 130.424 165.114 1.00 77.99 N
ATOM 17 C5 G A2540 80.707 130.486 166.165 1.00 78.06 C
ATOM 18 C6 G A2540 80.769 131.186 167.393 1.00 78.25 C
ATOM 19 O6 G A2540 81.664 131.934 167.810 1.00 79.08 O
ATOM 20 N1 G A2540 79.635 130.956 168.171 1.00 76.79 N
ATOM 21 C2 G A2540 78.578 130.165 167.816 1.00 75.90 C
ATOM 22 N2 G A2540 77.586 130.073 168.706 1.00 75.79 N
ATOM 23 N3 G A2540 78.501 129.513 166.674 1.00 76.40 N
ATOM 24 C4 G A2540 79.593 129.716 165.899 1.00 77.02 C
ATOM 25 P A A2541 76.983 131.063 160.651 1.00 65.56 P
ATOM 26 OP1 A A2541 76.319 131.148 159.331 1.00 66.91 O
ATOM 27 OP2 A A2541 78.022 132.053 161.013 1.00 67.44 O
ATOM 28 O5' A A2541 75.888 131.009 161.799 1.00 64.78 O
TER
ATOM 1 O3' U B2532 74.720 130.921 173.558 1.00 72.78 O
ATOM 2 P A B2533 75.291 129.425 173.642 1.00 72.43 P
ATOM 3 OP1 A B2533 75.338 129.045 175.072 1.00 72.25 O
ATOM 4 OP2 A B2533 76.522 129.328 172.814 1.00 71.80 O
ATOM 5 O5' A B2533 74.156 128.540 172.963 1.00 72.68 O
ATOM 6 C5' A B2533 72.846 128.447 173.561 1.00 71.69 C
ATOM 7 C4' A B2533 71.889 127.772 172.616 1.00 70.64 C
ATOM 8 O4' A B2533 71.843 128.545 171.393 1.00 70.78 O
ATOM 9 C3' A B2533 72.262 126.367 172.173 1.00 70.04 C
ATOM 10 O3' A B2533 71.812 125.394 173.126 1.00 68.89 O
ATOM 11 C2' A B2533 71.554 126.258 170.826 1.00 70.09 C
ATOM 12 O2' A B2533 70.169 125.994 170.951 1.00 69.58 O
ATOM 13 C1' A B2533 71.715 127.680 170.285 1.00 69.77 C
ATOM 14 N9 A B2533 72.871 127.878 169.413 1.00 69.36 N
ATOM 15 C8 A B2533 74.030 128.573 169.669 1.00 69.59 C
ATOM 16 N7 A B2533 74.869 128.592 168.663 1.00 69.80 N
ATOM 17 C5 A B2533 74.227 127.851 167.684 1.00 69.25 C
ATOM 18 C6 A B2533 74.596 127.500 166.384 1.00 68.74 C
ATOM 19 N6 A B2533 75.750 127.856 165.820 1.00 68.77 N
ATOM 20 N1 A B2533 73.729 126.759 165.668 1.00 68.25 N
ATOM 21 C2 A B2533 72.572 126.401 166.234 1.00 68.08 C
ATOM 22 N3 A B2533 72.113 126.666 167.449 1.00 68.26 N
ATOM 23 C4 A B2533 72.999 127.404 168.132 1.00 69.22 C
ATOM 24 P C B2534 72.831 124.264 173.664 1.00 68.54 P
ATOM 25 OP1 C B2534 72.042 123.214 174.370 1.00 67.11 O
ATOM 26 OP2 C B2534 73.975 124.901 174.345 1.00 69.08 O
ATOM 27 O5' C B2534 73.421 123.622 172.338 1.00 67.01 O
TER
ATOM 2 P G A2540 82.591 129.538 160.315 1.00 75.54 P
ATOM 3 OP1 G A2540 82.311 129.326 158.872 1.00 75.41 O
ATOM 4 OP2 G A2540 83.010 130.883 160.784 1.00 76.02 O
ATOM 5 O5' G A2540 81.281 129.147 161.127 1.00 73.87 O
ATOM 6 C5' G A2540 80.403 128.104 160.673 1.00 71.98 C
ATOM 7 C4' G A2540 79.220 128.007 161.597 1.00 71.52 C
ATOM 8 O4' G A2540 79.651 127.615 162.924 1.00 71.97 O
ATOM 9 C3' G A2540 78.525 129.333 161.819 1.00 70.29 C
ATOM 10 O3' G A2540 77.644 129.619 160.753 1.00 68.49 O
ATOM 11 C2' G A2540 77.836 129.124 163.157 1.00 71.83 C
ATOM 12 O2' G A2540 76.640 128.374 163.081 1.00 71.11 O
ATOM 13 C1' G A2540 78.899 128.318 163.901 1.00 73.36 C
ATOM 14 N9 G A2540 79.810 129.181 164.648 1.00 76.10 N
ATOM 15 C8 G A2540 81.043 129.641 164.239 1.00 77.47 C
ATOM 16 N7 G A2540 81.615 130.424 165.114 1.00 77.99 N
ATOM 17 C5 G A2540 80.707 130.486 166.165 1.00 78.06 C
ATOM 18 C6 G A2540 80.769 131.186 167.393 1.00 78.25 C
ATOM 19 O6 G A2540 81.664 131.934 167.810 1.00 79.08 O
ATOM 20 N1 G A2540 79.635 130.956 168.171 1.00 76.79 N
ATOM 21 C2 G A2540 78.578 130.165 167.816 1.00 75.90 C
ATOM 22 N2 G A2540 77.586 130.073 168.706 1.00 75.79 N
ATOM 23 N3 G A2540 78.501 129.513 166.674 1.00 76.40 N
ATOM 24 C4 G A2540 79.593 129.716 165.899 1.00 77.02 C
ATOM 25 P A A2541 76.983 131.063 160.651 1.00 65.56 P
ATOM 26 OP1 A A2541 76.319 131.148 159.331 1.00 66.91 O
ATOM 27 OP2 A A2541 78.022 132.053 161.013 1.00 67.44 O
ATOM 28 O5' A A2541 75.888 131.009 161.799 1.00 64.78 O
TER
ATOM 1 O3' U B2532 74.720 130.921 173.558 1.00 72.78 O
ATOM 2 P A B2533 75.291 129.425 173.642 1.00 72.43 P
ATOM 3 OP1 A B2533 75.338 129.045 175.072 1.00 72.25 O
ATOM 4 OP2 A B2533 76.522 129.328 172.814 1.00 71.80 O
ATOM 5 O5' A B2533 74.156 128.540 172.963 1.00 72.68 O
ATOM 6 C5' A B2533 72.846 128.447 173.561 1.00 71.69 C
ATOM 7 C4' A B2533 71.889 127.772 172.616 1.00 70.64 C
ATOM 8 O4' A B2533 71.843 128.545 171.393 1.00 70.78 O
ATOM 9 C3' A B2533 72.262 126.367 172.173 1.00 70.04 C
ATOM 10 O3' A B2533 71.812 125.394 173.126 1.00 68.89 O
ATOM 11 C2' A B2533 71.554 126.258 170.826 1.00 70.09 C
ATOM 12 O2' A B2533 70.169 125.994 170.951 1.00 69.58 O
ATOM 13 C1' A B2533 71.715 127.680 170.285 1.00 69.77 C
ATOM 14 N9 A B2533 72.871 127.878 169.413 1.00 69.36 N
ATOM 15 C8 A B2533 74.030 128.573 169.669 1.00 69.59 C
ATOM 16 N7 A B2533 74.869 128.592 168.663 1.00 69.80 N
ATOM 17 C5 A B2533 74.227 127.851 167.684 1.00 69.25 C
ATOM 18 C6 A B2533 74.596 127.500 166.384 1.00 68.74 C
ATOM 19 N6 A B2533 75.750 127.856 165.820 1.00 68.77 N
ATOM 20 N1 A B2533 73.729 126.759 165.668 1.00 68.25 N
ATOM 21 C2 A B2533 72.572 126.401 166.234 1.00 68.08 C
ATOM 22 N3 A B2533 72.113 126.666 167.449 1.00 68.26 N
ATOM 23 C4 A B2533 72.999 127.404 168.132 1.00 69.22 C
ATOM 24 P C B2534 72.831 124.264 173.664 1.00 68.54 P
ATOM 25 OP1 C B2534 72.042 123.214 174.370 1.00 67.11 O
ATOM 26 OP2 C B2534 73.975 124.901 174.345 1.00 69.08 O
ATOM 27 O5' C B2534 73.421 123.622 172.338 1.00 67.01 O
TER
Atoms:
OP1: (82.311,129.326,158.872)
OP2: (83.010,130.883,160.784)
C3': (78.525,129.333,161.819)
C1': (78.899,128.318,163.901)
C5': (80.403,128.104,160.673)
O6: (81.664,131.934,167.810)
O4': (79.651,127.615,162.924)
C8: (81.043,129.641,164.239)
C2: (78.578,130.165,167.816)
C6: (80.769,131.186,167.393)
C5: (80.707,130.486,166.165)
C4: (79.593,129.716,165.899)
P: (82.591,129.538,160.315)
C4': (79.220,128.007,161.597)
C2': (77.836,129.124,163.157)
O2': (76.640,128.374,163.081)
N1: (79.635,130.956,168.171)
N2: (77.586,130.073,168.706)
N3: (78.501,129.513,166.674)
N7: (81.615,130.424,165.114)
N9: (79.810,129.181,164.648)
O5': (81.281,129.147,161.127)
O3': (77.644,129.619,160.753)
OP2: (83.010,130.883,160.784)
C3': (78.525,129.333,161.819)
C1': (78.899,128.318,163.901)
C5': (80.403,128.104,160.673)
O6: (81.664,131.934,167.810)
O4': (79.651,127.615,162.924)
C8: (81.043,129.641,164.239)
C2: (78.578,130.165,167.816)
C6: (80.769,131.186,167.393)
C5: (80.707,130.486,166.165)
C4: (79.593,129.716,165.899)
P: (82.591,129.538,160.315)
C4': (79.220,128.007,161.597)
C2': (77.836,129.124,163.157)
O2': (76.640,128.374,163.081)
N1: (79.635,130.956,168.171)
N2: (77.586,130.073,168.706)
N3: (78.501,129.513,166.674)
N7: (81.615,130.424,165.114)
N9: (79.810,129.181,164.648)
O5': (81.281,129.147,161.127)
O3': (77.644,129.619,160.753)
OP1: (75.338,129.045,175.072)
OP2: (76.522,129.328,172.814)
C3': (72.262,126.367,172.173)
C1': (71.715,127.680,170.285)
C5': (72.846,128.447,173.561)
O4': (71.843,128.545,171.393)
C8: (74.030,128.573,169.669)
O2': (70.169,125.994,170.951)
C6: (74.596,127.500,166.384)
C5: (74.227,127.851,167.684)
C4: (72.999,127.404,168.132)
P: (75.291,129.425,173.642)
C4': (71.889,127.772,172.616)
C2': (71.554,126.258,170.826)
C2: (72.572,126.401,166.234)
N1: (73.729,126.759,165.668)
N3: (72.113,126.666,167.449)
N6: (75.750,127.856,165.820)
N7: (74.869,128.592,168.663)
N9: (72.871,127.878,169.413)
O5': (74.156,128.540,172.963)
O3': (71.812,125.394,173.126)
OP2: (76.522,129.328,172.814)
C3': (72.262,126.367,172.173)
C1': (71.715,127.680,170.285)
C5': (72.846,128.447,173.561)
O4': (71.843,128.545,171.393)
C8: (74.030,128.573,169.669)
O2': (70.169,125.994,170.951)
C6: (74.596,127.500,166.384)
C5: (74.227,127.851,167.684)
C4: (72.999,127.404,168.132)
P: (75.291,129.425,173.642)
C4': (71.889,127.772,172.616)
C2': (71.554,126.258,170.826)
C2: (72.572,126.401,166.234)
N1: (73.729,126.759,165.668)
N3: (72.113,126.666,167.449)
N6: (75.750,127.856,165.820)
N7: (74.869,128.592,168.663)
N9: (72.871,127.878,169.413)
O5': (74.156,128.540,172.963)
O3': (71.812,125.394,173.126)
Image (generated by PyMOL):