Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12471:1720
Extra
PDB:
ATOM 1 O3' U A2470 39.194 -68.254 70.790 1.00 55.81 O
ATOM 2 P U A2471 38.695 -66.754 71.071 1.00 65.00 P
ATOM 3 OP1 U A2471 38.469 -66.647 72.524 1.00 64.99 O
ATOM 4 OP2 U A2471 37.572 -66.466 70.144 1.00 64.89 O
ATOM 5 O5' U A2471 39.943 -65.883 70.644 1.00 64.70 O
ATOM 6 C5' U A2471 41.248 -66.366 70.829 1.00 64.89 C
ATOM 7 C4' U A2471 41.995 -66.476 69.526 1.00 64.94 C
ATOM 8 O4' U A2471 41.397 -67.488 68.685 1.00 65.29 O
ATOM 9 C3' U A2471 42.006 -65.259 68.618 1.00 64.50 C
ATOM 10 O3' U A2471 42.828 -64.206 69.087 1.00 64.15 O
ATOM 11 C2' U A2471 42.503 -65.881 67.330 1.00 64.73 C
ATOM 12 O2' U A2471 43.890 -66.139 67.413 1.00 64.86 O
ATOM 13 C1' U A2471 41.767 -67.228 67.353 1.00 65.21 C
ATOM 14 N1 U A2471 40.583 -67.196 66.499 1.00 65.19 N
ATOM 15 C2 U A2471 40.938 -67.617 65.258 1.00 65.37 C
ATOM 16 O2 U A2471 42.056 -67.995 65.131 1.00 65.53 O
ATOM 17 N3 U A2471 40.014 -67.640 64.271 1.00 65.39 N
ATOM 18 C4 U A2471 38.725 -67.217 64.473 1.00 65.23 C
ATOM 19 O4 U A2471 37.931 -67.252 63.537 1.00 65.27 O
ATOM 20 C5 U A2471 38.429 -66.749 65.805 1.00 65.02 C
ATOM 21 C6 U A2471 39.347 -66.727 66.785 1.00 65.00 C
ATOM 22 P G A2472 43.039 -62.856 68.214 1.00 54.58 P
ATOM 23 OP1 G A2472 43.598 -61.843 69.161 1.00 54.26 O
ATOM 24 OP2 G A2472 41.752 -62.547 67.487 1.00 54.45 O
ATOM 25 O5' G A2472 44.144 -63.279 67.140 1.00 54.76 O
TER
ATOM 1 O3' A B 719 49.054 -74.166 63.767 1.00 70.80 O
ATOM 2 P U B 720 49.891 -73.315 62.677 1.00 75.05 P
ATOM 3 OP1 U B 720 49.453 -73.794 61.348 1.00 75.28 O
ATOM 4 OP2 U B 720 51.328 -73.398 63.030 1.00 75.16 O
ATOM 5 O5' U B 720 49.376 -71.819 62.917 1.00 74.41 O
ATOM 6 C5' U B 720 48.051 -71.423 62.578 1.00 74.20 C
ATOM 7 C4' U B 720 48.025 -70.101 61.822 1.00 73.71 C
ATOM 8 O4' U B 720 46.804 -70.032 61.071 1.00 73.67 O
ATOM 9 C3' U B 720 48.008 -68.831 62.669 1.00 73.19 C
ATOM 10 O3' U B 720 49.298 -68.377 63.044 1.00 73.07 O
ATOM 11 C2' U B 720 47.263 -67.825 61.805 1.00 72.81 C
ATOM 12 O2' U B 720 48.155 -67.146 60.926 1.00 72.64 O
ATOM 13 C1' U B 720 46.345 -68.711 60.982 1.00 73.15 C
ATOM 14 N1 U B 720 44.929 -68.641 61.430 1.00 73.06 N
ATOM 15 C2 U B 720 43.990 -68.543 60.404 1.00 73.04 C
ATOM 16 O2 U B 720 44.344 -68.576 59.251 1.00 73.13 O
ATOM 17 N3 U B 720 42.646 -68.441 60.665 1.00 72.96 N
ATOM 18 C4 U B 720 42.136 -68.407 61.909 1.00 72.88 C
ATOM 19 O4 U B 720 40.914 -68.309 62.040 1.00 72.83 O
ATOM 20 C5 U B 720 43.179 -68.492 62.905 1.00 72.90 C
ATOM 21 C6 U B 720 44.500 -68.587 62.709 1.00 72.97 C
ATOM 22 P U B 721 49.801 -68.538 64.566 1.00 61.45 P
ATOM 23 OP1 U B 721 50.986 -67.596 64.741 1.00 61.16 O
ATOM 24 OP2 U B 721 49.988 -70.006 64.804 1.00 62.02 O
ATOM 25 O5' U B 721 48.557 -68.014 65.430 1.00 61.18 O
TER
ATOM 2 P U A2471 38.695 -66.754 71.071 1.00 65.00 P
ATOM 3 OP1 U A2471 38.469 -66.647 72.524 1.00 64.99 O
ATOM 4 OP2 U A2471 37.572 -66.466 70.144 1.00 64.89 O
ATOM 5 O5' U A2471 39.943 -65.883 70.644 1.00 64.70 O
ATOM 6 C5' U A2471 41.248 -66.366 70.829 1.00 64.89 C
ATOM 7 C4' U A2471 41.995 -66.476 69.526 1.00 64.94 C
ATOM 8 O4' U A2471 41.397 -67.488 68.685 1.00 65.29 O
ATOM 9 C3' U A2471 42.006 -65.259 68.618 1.00 64.50 C
ATOM 10 O3' U A2471 42.828 -64.206 69.087 1.00 64.15 O
ATOM 11 C2' U A2471 42.503 -65.881 67.330 1.00 64.73 C
ATOM 12 O2' U A2471 43.890 -66.139 67.413 1.00 64.86 O
ATOM 13 C1' U A2471 41.767 -67.228 67.353 1.00 65.21 C
ATOM 14 N1 U A2471 40.583 -67.196 66.499 1.00 65.19 N
ATOM 15 C2 U A2471 40.938 -67.617 65.258 1.00 65.37 C
ATOM 16 O2 U A2471 42.056 -67.995 65.131 1.00 65.53 O
ATOM 17 N3 U A2471 40.014 -67.640 64.271 1.00 65.39 N
ATOM 18 C4 U A2471 38.725 -67.217 64.473 1.00 65.23 C
ATOM 19 O4 U A2471 37.931 -67.252 63.537 1.00 65.27 O
ATOM 20 C5 U A2471 38.429 -66.749 65.805 1.00 65.02 C
ATOM 21 C6 U A2471 39.347 -66.727 66.785 1.00 65.00 C
ATOM 22 P G A2472 43.039 -62.856 68.214 1.00 54.58 P
ATOM 23 OP1 G A2472 43.598 -61.843 69.161 1.00 54.26 O
ATOM 24 OP2 G A2472 41.752 -62.547 67.487 1.00 54.45 O
ATOM 25 O5' G A2472 44.144 -63.279 67.140 1.00 54.76 O
TER
ATOM 1 O3' A B 719 49.054 -74.166 63.767 1.00 70.80 O
ATOM 2 P U B 720 49.891 -73.315 62.677 1.00 75.05 P
ATOM 3 OP1 U B 720 49.453 -73.794 61.348 1.00 75.28 O
ATOM 4 OP2 U B 720 51.328 -73.398 63.030 1.00 75.16 O
ATOM 5 O5' U B 720 49.376 -71.819 62.917 1.00 74.41 O
ATOM 6 C5' U B 720 48.051 -71.423 62.578 1.00 74.20 C
ATOM 7 C4' U B 720 48.025 -70.101 61.822 1.00 73.71 C
ATOM 8 O4' U B 720 46.804 -70.032 61.071 1.00 73.67 O
ATOM 9 C3' U B 720 48.008 -68.831 62.669 1.00 73.19 C
ATOM 10 O3' U B 720 49.298 -68.377 63.044 1.00 73.07 O
ATOM 11 C2' U B 720 47.263 -67.825 61.805 1.00 72.81 C
ATOM 12 O2' U B 720 48.155 -67.146 60.926 1.00 72.64 O
ATOM 13 C1' U B 720 46.345 -68.711 60.982 1.00 73.15 C
ATOM 14 N1 U B 720 44.929 -68.641 61.430 1.00 73.06 N
ATOM 15 C2 U B 720 43.990 -68.543 60.404 1.00 73.04 C
ATOM 16 O2 U B 720 44.344 -68.576 59.251 1.00 73.13 O
ATOM 17 N3 U B 720 42.646 -68.441 60.665 1.00 72.96 N
ATOM 18 C4 U B 720 42.136 -68.407 61.909 1.00 72.88 C
ATOM 19 O4 U B 720 40.914 -68.309 62.040 1.00 72.83 O
ATOM 20 C5 U B 720 43.179 -68.492 62.905 1.00 72.90 C
ATOM 21 C6 U B 720 44.500 -68.587 62.709 1.00 72.97 C
ATOM 22 P U B 721 49.801 -68.538 64.566 1.00 61.45 P
ATOM 23 OP1 U B 721 50.986 -67.596 64.741 1.00 61.16 O
ATOM 24 OP2 U B 721 49.988 -70.006 64.804 1.00 62.02 O
ATOM 25 O5' U B 721 48.557 -68.014 65.430 1.00 61.18 O
TER
Atoms:
C4: (38.725,-67.217,64.473)
N3: (40.014,-67.640,64.271)
OP1: (38.469,-66.647,72.524)
OP2: (37.572,-66.466,70.144)
C2: (40.938,-67.617,65.258)
C1': (41.767,-67.228,67.353)
C3': (42.006,-65.259,68.618)
O5': (39.943,-65.883,70.644)
O4': (41.397,-67.488,68.685)
C5': (41.248,-66.366,70.829)
P: (38.695,-66.754,71.071)
C4': (41.995,-66.476,69.526)
C2': (42.503,-65.881,67.330)
O2': (43.890,-66.139,67.413)
N1: (40.583,-67.196,66.499)
O4: (37.931,-67.252,63.537)
O2: (42.056,-67.995,65.131)
C6: (39.347,-66.727,66.785)
C5: (38.429,-66.749,65.805)
O3': (42.828,-64.206,69.087)
N3: (40.014,-67.640,64.271)
OP1: (38.469,-66.647,72.524)
OP2: (37.572,-66.466,70.144)
C2: (40.938,-67.617,65.258)
C1': (41.767,-67.228,67.353)
C3': (42.006,-65.259,68.618)
O5': (39.943,-65.883,70.644)
O4': (41.397,-67.488,68.685)
C5': (41.248,-66.366,70.829)
P: (38.695,-66.754,71.071)
C4': (41.995,-66.476,69.526)
C2': (42.503,-65.881,67.330)
O2': (43.890,-66.139,67.413)
N1: (40.583,-67.196,66.499)
O4: (37.931,-67.252,63.537)
O2: (42.056,-67.995,65.131)
C6: (39.347,-66.727,66.785)
C5: (38.429,-66.749,65.805)
O3': (42.828,-64.206,69.087)
C4: (42.136,-68.407,61.909)
N3: (42.646,-68.441,60.665)
OP1: (49.453,-73.794,61.348)
OP2: (51.328,-73.398,63.030)
C2: (43.990,-68.543,60.404)
C1': (46.345,-68.711,60.982)
C3': (48.008,-68.831,62.669)
O5': (49.376,-71.819,62.917)
O4': (46.804,-70.032,61.071)
C5': (48.051,-71.423,62.578)
P: (49.891,-73.315,62.677)
C4': (48.025,-70.101,61.822)
C2': (47.263,-67.825,61.805)
O2': (48.155,-67.146,60.926)
N1: (44.929,-68.641,61.430)
O4: (40.914,-68.309,62.040)
O2: (44.344,-68.576,59.251)
C6: (44.500,-68.587,62.709)
C5: (43.179,-68.492,62.905)
O3': (49.298,-68.377,63.044)
N3: (42.646,-68.441,60.665)
OP1: (49.453,-73.794,61.348)
OP2: (51.328,-73.398,63.030)
C2: (43.990,-68.543,60.404)
C1': (46.345,-68.711,60.982)
C3': (48.008,-68.831,62.669)
O5': (49.376,-71.819,62.917)
O4': (46.804,-70.032,61.071)
C5': (48.051,-71.423,62.578)
P: (49.891,-73.315,62.677)
C4': (48.025,-70.101,61.822)
C2': (47.263,-67.825,61.805)
O2': (48.155,-67.146,60.926)
N1: (44.929,-68.641,61.430)
O4: (40.914,-68.309,62.040)
O2: (44.344,-68.576,59.251)
C6: (44.500,-68.587,62.709)
C5: (43.179,-68.492,62.905)
O3': (49.298,-68.377,63.044)
Image (generated by PyMOL):