Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1275:A1300
Extra
PDB:
ATOM 1 O3' G A1274 4.061 136.607 57.296 1.00 50.69 O
ATOM 2 P G A1275 5.071 136.645 58.535 1.00 46.74 P
ATOM 3 OP1 G A1275 4.861 135.357 59.223 1.00 47.13 O
ATOM 4 OP2 G A1275 4.907 137.915 59.268 1.00 44.38 O
ATOM 5 O5' G A1275 6.511 136.618 57.882 1.00 45.93 O
ATOM 6 C5' G A1275 7.101 135.398 57.452 1.00 45.17 C
ATOM 7 C4' G A1275 8.590 135.563 57.448 1.00 45.57 C
ATOM 8 O4' G A1275 8.907 136.830 56.797 1.00 46.06 O
ATOM 9 C3' G A1275 9.226 135.654 58.827 1.00 45.11 C
ATOM 10 O3' G A1275 10.542 135.158 58.693 1.00 44.93 O
ATOM 11 C2' G A1275 9.285 137.150 59.086 1.00 43.95 C
ATOM 12 O2' G A1275 10.311 137.452 59.996 1.00 43.63 O
ATOM 13 C1' G A1275 9.621 137.665 57.688 1.00 43.61 C
ATOM 14 N9 G A1275 9.300 139.067 57.407 1.00 42.08 N
ATOM 15 C8 G A1275 8.134 139.742 57.688 1.00 41.81 C
ATOM 16 N7 G A1275 8.191 141.011 57.383 1.00 41.47 N
ATOM 17 C5 G A1275 9.463 141.184 56.851 1.00 40.72 C
ATOM 18 C6 G A1275 10.109 142.355 56.358 1.00 40.10 C
ATOM 19 O6 G A1275 9.683 143.511 56.313 1.00 39.58 O
ATOM 20 N1 G A1275 11.388 142.076 55.898 1.00 39.78 N
ATOM 21 C2 G A1275 11.984 140.840 55.917 1.00 39.90 C
ATOM 22 N2 G A1275 13.242 140.779 55.434 1.00 38.83 N
ATOM 23 N3 G A1275 11.397 139.746 56.377 1.00 40.17 N
ATOM 24 C4 G A1275 10.150 139.990 56.831 1.00 40.76 C
ATOM 25 P A A1276 11.147 134.208 59.823 1.00 45.89 P
ATOM 26 OP1 A A1276 10.092 133.290 60.321 1.00 44.55 O
ATOM 27 OP2 A A1276 11.858 135.081 60.789 1.00 45.55 O
ATOM 28 O5' A A1276 12.221 133.356 59.019 1.00 42.28 O
TER
ATOM 1 O3' G B1299 18.101 141.328 55.209 1.00 44.23 O
ATOM 2 P A B1300 18.920 141.731 53.893 1.00 45.74 P
ATOM 3 OP1 A B1300 20.140 142.453 54.335 1.00 43.03 O
ATOM 4 OP2 A B1300 17.983 142.404 52.953 1.00 46.12 O
ATOM 5 O5' A B1300 19.318 140.317 53.268 1.00 42.73 O
ATOM 6 C5' A B1300 20.306 139.484 53.876 1.00 43.45 C
ATOM 7 C4' A B1300 19.923 138.026 53.741 1.00 44.02 C
ATOM 8 O4' A B1300 18.704 137.771 54.506 1.00 44.22 O
ATOM 9 C3' A B1300 19.663 137.488 52.336 1.00 43.42 C
ATOM 10 O3' A B1300 20.191 136.164 52.226 1.00 42.68 O
ATOM 11 C2' A B1300 18.136 137.434 52.288 1.00 43.78 C
ATOM 12 O2' A B1300 17.607 136.484 51.387 1.00 44.10 O
ATOM 13 C1' A B1300 17.805 137.031 53.718 1.00 42.75 C
ATOM 14 N9 A B1300 16.442 137.325 54.162 1.00 42.53 N
ATOM 15 C8 A B1300 15.952 138.509 54.681 1.00 42.38 C
ATOM 16 N7 A B1300 14.700 138.444 55.065 1.00 41.03 N
ATOM 17 C5 A B1300 14.332 137.136 54.774 1.00 40.57 C
ATOM 18 C6 A B1300 13.140 136.434 54.971 1.00 40.06 C
ATOM 19 N6 A B1300 12.073 136.957 55.573 1.00 40.23 N
ATOM 20 N1 A B1300 13.082 135.152 54.541 1.00 40.47 N
ATOM 21 C2 A B1300 14.166 134.614 53.975 1.00 40.06 C
ATOM 22 N3 A B1300 15.359 135.160 53.757 1.00 40.47 N
ATOM 23 C4 A B1300 15.382 136.443 54.185 1.00 41.85 C
ATOM 24 P C B1301 21.173 135.784 51.006 1.00 41.82 P
ATOM 25 OP1 C B1301 22.534 136.220 51.346 1.00 43.27 O
ATOM 26 OP2 C B1301 20.588 136.175 49.715 1.00 44.49 O
ATOM 27 O5' C B1301 21.148 134.204 50.998 1.00 41.13 O
TER
ATOM 2 P G A1275 5.071 136.645 58.535 1.00 46.74 P
ATOM 3 OP1 G A1275 4.861 135.357 59.223 1.00 47.13 O
ATOM 4 OP2 G A1275 4.907 137.915 59.268 1.00 44.38 O
ATOM 5 O5' G A1275 6.511 136.618 57.882 1.00 45.93 O
ATOM 6 C5' G A1275 7.101 135.398 57.452 1.00 45.17 C
ATOM 7 C4' G A1275 8.590 135.563 57.448 1.00 45.57 C
ATOM 8 O4' G A1275 8.907 136.830 56.797 1.00 46.06 O
ATOM 9 C3' G A1275 9.226 135.654 58.827 1.00 45.11 C
ATOM 10 O3' G A1275 10.542 135.158 58.693 1.00 44.93 O
ATOM 11 C2' G A1275 9.285 137.150 59.086 1.00 43.95 C
ATOM 12 O2' G A1275 10.311 137.452 59.996 1.00 43.63 O
ATOM 13 C1' G A1275 9.621 137.665 57.688 1.00 43.61 C
ATOM 14 N9 G A1275 9.300 139.067 57.407 1.00 42.08 N
ATOM 15 C8 G A1275 8.134 139.742 57.688 1.00 41.81 C
ATOM 16 N7 G A1275 8.191 141.011 57.383 1.00 41.47 N
ATOM 17 C5 G A1275 9.463 141.184 56.851 1.00 40.72 C
ATOM 18 C6 G A1275 10.109 142.355 56.358 1.00 40.10 C
ATOM 19 O6 G A1275 9.683 143.511 56.313 1.00 39.58 O
ATOM 20 N1 G A1275 11.388 142.076 55.898 1.00 39.78 N
ATOM 21 C2 G A1275 11.984 140.840 55.917 1.00 39.90 C
ATOM 22 N2 G A1275 13.242 140.779 55.434 1.00 38.83 N
ATOM 23 N3 G A1275 11.397 139.746 56.377 1.00 40.17 N
ATOM 24 C4 G A1275 10.150 139.990 56.831 1.00 40.76 C
ATOM 25 P A A1276 11.147 134.208 59.823 1.00 45.89 P
ATOM 26 OP1 A A1276 10.092 133.290 60.321 1.00 44.55 O
ATOM 27 OP2 A A1276 11.858 135.081 60.789 1.00 45.55 O
ATOM 28 O5' A A1276 12.221 133.356 59.019 1.00 42.28 O
TER
ATOM 1 O3' G B1299 18.101 141.328 55.209 1.00 44.23 O
ATOM 2 P A B1300 18.920 141.731 53.893 1.00 45.74 P
ATOM 3 OP1 A B1300 20.140 142.453 54.335 1.00 43.03 O
ATOM 4 OP2 A B1300 17.983 142.404 52.953 1.00 46.12 O
ATOM 5 O5' A B1300 19.318 140.317 53.268 1.00 42.73 O
ATOM 6 C5' A B1300 20.306 139.484 53.876 1.00 43.45 C
ATOM 7 C4' A B1300 19.923 138.026 53.741 1.00 44.02 C
ATOM 8 O4' A B1300 18.704 137.771 54.506 1.00 44.22 O
ATOM 9 C3' A B1300 19.663 137.488 52.336 1.00 43.42 C
ATOM 10 O3' A B1300 20.191 136.164 52.226 1.00 42.68 O
ATOM 11 C2' A B1300 18.136 137.434 52.288 1.00 43.78 C
ATOM 12 O2' A B1300 17.607 136.484 51.387 1.00 44.10 O
ATOM 13 C1' A B1300 17.805 137.031 53.718 1.00 42.75 C
ATOM 14 N9 A B1300 16.442 137.325 54.162 1.00 42.53 N
ATOM 15 C8 A B1300 15.952 138.509 54.681 1.00 42.38 C
ATOM 16 N7 A B1300 14.700 138.444 55.065 1.00 41.03 N
ATOM 17 C5 A B1300 14.332 137.136 54.774 1.00 40.57 C
ATOM 18 C6 A B1300 13.140 136.434 54.971 1.00 40.06 C
ATOM 19 N6 A B1300 12.073 136.957 55.573 1.00 40.23 N
ATOM 20 N1 A B1300 13.082 135.152 54.541 1.00 40.47 N
ATOM 21 C2 A B1300 14.166 134.614 53.975 1.00 40.06 C
ATOM 22 N3 A B1300 15.359 135.160 53.757 1.00 40.47 N
ATOM 23 C4 A B1300 15.382 136.443 54.185 1.00 41.85 C
ATOM 24 P C B1301 21.173 135.784 51.006 1.00 41.82 P
ATOM 25 OP1 C B1301 22.534 136.220 51.346 1.00 43.27 O
ATOM 26 OP2 C B1301 20.588 136.175 49.715 1.00 44.49 O
ATOM 27 O5' C B1301 21.148 134.204 50.998 1.00 41.13 O
TER
Atoms:
OP1: (4.861,135.357,59.223)
OP2: (4.907,137.915,59.268)
C3': (9.226,135.654,58.827)
C1': (9.621,137.665,57.688)
C5': (7.101,135.398,57.452)
O6: (9.683,143.511,56.313)
O4': (8.907,136.830,56.797)
C8: (8.134,139.742,57.688)
C2: (11.984,140.840,55.917)
C6: (10.109,142.355,56.358)
C5: (9.463,141.184,56.851)
C4: (10.150,139.990,56.831)
P: (5.071,136.645,58.535)
C4': (8.590,135.563,57.448)
C2': (9.285,137.150,59.086)
O2': (10.311,137.452,59.996)
N1: (11.388,142.076,55.898)
N2: (13.242,140.779,55.434)
N3: (11.397,139.746,56.377)
N7: (8.191,141.011,57.383)
N9: (9.300,139.067,57.407)
O5': (6.511,136.618,57.882)
O3': (10.542,135.158,58.693)
OP2: (4.907,137.915,59.268)
C3': (9.226,135.654,58.827)
C1': (9.621,137.665,57.688)
C5': (7.101,135.398,57.452)
O6: (9.683,143.511,56.313)
O4': (8.907,136.830,56.797)
C8: (8.134,139.742,57.688)
C2: (11.984,140.840,55.917)
C6: (10.109,142.355,56.358)
C5: (9.463,141.184,56.851)
C4: (10.150,139.990,56.831)
P: (5.071,136.645,58.535)
C4': (8.590,135.563,57.448)
C2': (9.285,137.150,59.086)
O2': (10.311,137.452,59.996)
N1: (11.388,142.076,55.898)
N2: (13.242,140.779,55.434)
N3: (11.397,139.746,56.377)
N7: (8.191,141.011,57.383)
N9: (9.300,139.067,57.407)
O5': (6.511,136.618,57.882)
O3': (10.542,135.158,58.693)
OP1: (20.140,142.453,54.335)
OP2: (17.983,142.404,52.953)
C3': (19.663,137.488,52.336)
C1': (17.805,137.031,53.718)
C5': (20.306,139.484,53.876)
O4': (18.704,137.771,54.506)
C8: (15.952,138.509,54.681)
O2': (17.607,136.484,51.387)
C6: (13.140,136.434,54.971)
C5: (14.332,137.136,54.774)
C4: (15.382,136.443,54.185)
P: (18.920,141.731,53.893)
C4': (19.923,138.026,53.741)
C2': (18.136,137.434,52.288)
C2: (14.166,134.614,53.975)
N1: (13.082,135.152,54.541)
N3: (15.359,135.160,53.757)
N6: (12.073,136.957,55.573)
N7: (14.700,138.444,55.065)
N9: (16.442,137.325,54.162)
O5': (19.318,140.317,53.268)
O3': (20.191,136.164,52.226)
OP2: (17.983,142.404,52.953)
C3': (19.663,137.488,52.336)
C1': (17.805,137.031,53.718)
C5': (20.306,139.484,53.876)
O4': (18.704,137.771,54.506)
C8: (15.952,138.509,54.681)
O2': (17.607,136.484,51.387)
C6: (13.140,136.434,54.971)
C5: (14.332,137.136,54.774)
C4: (15.382,136.443,54.185)
P: (18.920,141.731,53.893)
C4': (19.923,138.026,53.741)
C2': (18.136,137.434,52.288)
C2: (14.166,134.614,53.975)
N1: (13.082,135.152,54.541)
N3: (15.359,135.160,53.757)
N6: (12.073,136.957,55.573)
N7: (14.700,138.444,55.065)
N9: (16.442,137.325,54.162)
O5': (19.318,140.317,53.268)
O3': (20.191,136.164,52.226)
Image (generated by PyMOL):