Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A355:A53
Extra
PDB:
ATOM 1 O3' A A 354 -72.131 -1.507 -77.235 1.00 29.40 O
ATOM 2 P G A 355 -72.926 -1.780 -75.869 1.00 18.45 P
ATOM 3 OP1 G A 355 -74.347 -1.364 -76.107 1.00 18.45 O
ATOM 4 OP2 G A 355 -72.149 -1.127 -74.764 1.00 18.45 O
ATOM 5 O5' G A 355 -72.832 -3.361 -75.719 1.00 18.45 O
ATOM 6 C5' G A 355 -73.450 -4.213 -76.660 1.00 18.45 C
ATOM 7 C4' G A 355 -73.253 -5.647 -76.290 1.00 18.45 C
ATOM 8 O4' G A 355 -71.848 -5.963 -76.353 1.00 18.45 O
ATOM 9 C3' G A 355 -73.650 -6.022 -74.875 1.00 18.45 C
ATOM 10 O3' G A 355 -75.030 -6.260 -74.733 1.00 18.45 O
ATOM 11 C2' G A 355 -72.825 -7.254 -74.626 1.00 18.45 C
ATOM 12 O2' G A 355 -73.436 -8.377 -75.244 1.00 18.45 O
ATOM 13 C1' G A 355 -71.530 -6.908 -75.364 1.00 18.45 C
ATOM 14 N9 G A 355 -70.546 -6.309 -74.467 1.00 18.51 N
ATOM 15 C8 G A 355 -70.208 -4.986 -74.418 1.00 18.51 C
ATOM 16 N7 G A 355 -69.324 -4.723 -73.495 1.00 18.51 N
ATOM 17 C5 G A 355 -69.079 -5.957 -72.904 1.00 18.51 C
ATOM 18 C6 G A 355 -68.210 -6.318 -71.833 1.00 18.51 C
ATOM 19 O6 G A 355 -67.446 -5.606 -71.161 1.00 18.51 O
ATOM 20 N1 G A 355 -68.275 -7.678 -71.544 1.00 18.51 N
ATOM 21 C2 G A 355 -69.059 -8.583 -72.194 1.00 18.51 C
ATOM 22 N2 G A 355 -68.946 -9.830 -71.721 1.00 18.51 N
ATOM 23 N3 G A 355 -69.875 -8.269 -73.200 1.00 18.51 N
ATOM 24 C4 G A 355 -69.832 -6.952 -73.497 1.00 18.51 C
ATOM 25 P U A 356 -75.680 -6.329 -73.263 1.00 21.17 P
ATOM 26 OP1 U A 356 -77.128 -6.605 -73.445 1.00 21.17 O
ATOM 27 OP2 U A 356 -75.274 -5.079 -72.555 1.00 21.17 O
ATOM 28 O5' U A 356 -74.959 -7.603 -72.597 1.00 21.17 O
TER
ATOM 1 O3' C B 52 -64.545 -14.468 -69.784 1.00 22.98 O
ATOM 2 P A B 53 -64.346 -14.392 -71.382 1.00 24.31 P
ATOM 3 OP1 A B 53 -63.316 -15.402 -71.756 1.00 24.31 O
ATOM 4 OP2 A B 53 -64.089 -12.983 -71.692 1.00 24.31 O
ATOM 5 O5' A B 53 -65.775 -14.831 -71.968 1.00 24.31 O
ATOM 6 C5' A B 53 -66.284 -16.144 -71.735 1.00 24.31 C
ATOM 7 C4' A B 53 -67.105 -16.665 -72.899 1.00 24.31 C
ATOM 8 O4' A B 53 -68.443 -16.123 -72.838 1.00 24.31 O
ATOM 9 C3' A B 53 -66.606 -16.317 -74.292 1.00 24.31 C
ATOM 10 O3' A B 53 -65.639 -17.229 -74.759 1.00 24.31 O
ATOM 11 C2' A B 53 -67.876 -16.319 -75.130 1.00 24.31 C
ATOM 12 O2' A B 53 -68.210 -17.628 -75.547 1.00 24.31 O
ATOM 13 C1' A B 53 -68.921 -15.848 -74.131 1.00 24.31 C
ATOM 14 N9 A B 53 -69.170 -14.402 -74.231 1.00 25.26 N
ATOM 15 C8 A B 53 -68.956 -13.475 -73.255 1.00 25.26 C
ATOM 16 N7 A B 53 -69.282 -12.265 -73.618 1.00 25.26 N
ATOM 17 C5 A B 53 -69.739 -12.393 -74.908 1.00 25.26 C
ATOM 18 C6 A B 53 -70.224 -11.448 -75.833 1.00 25.26 C
ATOM 19 N6 A B 53 -70.340 -10.137 -75.613 1.00 25.26 N
ATOM 20 N1 A B 53 -70.579 -11.909 -77.045 1.00 25.26 N
ATOM 21 C2 A B 53 -70.459 -13.233 -77.274 1.00 25.26 C
ATOM 22 N3 A B 53 -70.019 -14.213 -76.476 1.00 25.26 N
ATOM 23 C4 A B 53 -69.669 -13.712 -75.294 1.00 25.26 C
ATOM 24 P U B 54 -64.397 -16.720 -75.643 1.00 22.50 P
ATOM 25 OP1 U B 54 -63.666 -17.921 -76.096 1.00 22.50 O
ATOM 26 OP2 U B 54 -63.669 -15.708 -74.824 1.00 22.50 O
ATOM 27 O5' U B 54 -65.099 -16.032 -76.891 1.00 22.50 O
TER
ATOM 2 P G A 355 -72.926 -1.780 -75.869 1.00 18.45 P
ATOM 3 OP1 G A 355 -74.347 -1.364 -76.107 1.00 18.45 O
ATOM 4 OP2 G A 355 -72.149 -1.127 -74.764 1.00 18.45 O
ATOM 5 O5' G A 355 -72.832 -3.361 -75.719 1.00 18.45 O
ATOM 6 C5' G A 355 -73.450 -4.213 -76.660 1.00 18.45 C
ATOM 7 C4' G A 355 -73.253 -5.647 -76.290 1.00 18.45 C
ATOM 8 O4' G A 355 -71.848 -5.963 -76.353 1.00 18.45 O
ATOM 9 C3' G A 355 -73.650 -6.022 -74.875 1.00 18.45 C
ATOM 10 O3' G A 355 -75.030 -6.260 -74.733 1.00 18.45 O
ATOM 11 C2' G A 355 -72.825 -7.254 -74.626 1.00 18.45 C
ATOM 12 O2' G A 355 -73.436 -8.377 -75.244 1.00 18.45 O
ATOM 13 C1' G A 355 -71.530 -6.908 -75.364 1.00 18.45 C
ATOM 14 N9 G A 355 -70.546 -6.309 -74.467 1.00 18.51 N
ATOM 15 C8 G A 355 -70.208 -4.986 -74.418 1.00 18.51 C
ATOM 16 N7 G A 355 -69.324 -4.723 -73.495 1.00 18.51 N
ATOM 17 C5 G A 355 -69.079 -5.957 -72.904 1.00 18.51 C
ATOM 18 C6 G A 355 -68.210 -6.318 -71.833 1.00 18.51 C
ATOM 19 O6 G A 355 -67.446 -5.606 -71.161 1.00 18.51 O
ATOM 20 N1 G A 355 -68.275 -7.678 -71.544 1.00 18.51 N
ATOM 21 C2 G A 355 -69.059 -8.583 -72.194 1.00 18.51 C
ATOM 22 N2 G A 355 -68.946 -9.830 -71.721 1.00 18.51 N
ATOM 23 N3 G A 355 -69.875 -8.269 -73.200 1.00 18.51 N
ATOM 24 C4 G A 355 -69.832 -6.952 -73.497 1.00 18.51 C
ATOM 25 P U A 356 -75.680 -6.329 -73.263 1.00 21.17 P
ATOM 26 OP1 U A 356 -77.128 -6.605 -73.445 1.00 21.17 O
ATOM 27 OP2 U A 356 -75.274 -5.079 -72.555 1.00 21.17 O
ATOM 28 O5' U A 356 -74.959 -7.603 -72.597 1.00 21.17 O
TER
ATOM 1 O3' C B 52 -64.545 -14.468 -69.784 1.00 22.98 O
ATOM 2 P A B 53 -64.346 -14.392 -71.382 1.00 24.31 P
ATOM 3 OP1 A B 53 -63.316 -15.402 -71.756 1.00 24.31 O
ATOM 4 OP2 A B 53 -64.089 -12.983 -71.692 1.00 24.31 O
ATOM 5 O5' A B 53 -65.775 -14.831 -71.968 1.00 24.31 O
ATOM 6 C5' A B 53 -66.284 -16.144 -71.735 1.00 24.31 C
ATOM 7 C4' A B 53 -67.105 -16.665 -72.899 1.00 24.31 C
ATOM 8 O4' A B 53 -68.443 -16.123 -72.838 1.00 24.31 O
ATOM 9 C3' A B 53 -66.606 -16.317 -74.292 1.00 24.31 C
ATOM 10 O3' A B 53 -65.639 -17.229 -74.759 1.00 24.31 O
ATOM 11 C2' A B 53 -67.876 -16.319 -75.130 1.00 24.31 C
ATOM 12 O2' A B 53 -68.210 -17.628 -75.547 1.00 24.31 O
ATOM 13 C1' A B 53 -68.921 -15.848 -74.131 1.00 24.31 C
ATOM 14 N9 A B 53 -69.170 -14.402 -74.231 1.00 25.26 N
ATOM 15 C8 A B 53 -68.956 -13.475 -73.255 1.00 25.26 C
ATOM 16 N7 A B 53 -69.282 -12.265 -73.618 1.00 25.26 N
ATOM 17 C5 A B 53 -69.739 -12.393 -74.908 1.00 25.26 C
ATOM 18 C6 A B 53 -70.224 -11.448 -75.833 1.00 25.26 C
ATOM 19 N6 A B 53 -70.340 -10.137 -75.613 1.00 25.26 N
ATOM 20 N1 A B 53 -70.579 -11.909 -77.045 1.00 25.26 N
ATOM 21 C2 A B 53 -70.459 -13.233 -77.274 1.00 25.26 C
ATOM 22 N3 A B 53 -70.019 -14.213 -76.476 1.00 25.26 N
ATOM 23 C4 A B 53 -69.669 -13.712 -75.294 1.00 25.26 C
ATOM 24 P U B 54 -64.397 -16.720 -75.643 1.00 22.50 P
ATOM 25 OP1 U B 54 -63.666 -17.921 -76.096 1.00 22.50 O
ATOM 26 OP2 U B 54 -63.669 -15.708 -74.824 1.00 22.50 O
ATOM 27 O5' U B 54 -65.099 -16.032 -76.891 1.00 22.50 O
TER
Atoms:
OP1: (-74.347,-1.364,-76.107)
OP2: (-72.149,-1.127,-74.764)
C3': (-73.650,-6.022,-74.875)
C1': (-71.530,-6.908,-75.364)
C5': (-73.450,-4.213,-76.660)
O6: (-67.446,-5.606,-71.161)
O4': (-71.848,-5.963,-76.353)
C8: (-70.208,-4.986,-74.418)
C2: (-69.059,-8.583,-72.194)
C6: (-68.210,-6.318,-71.833)
C5: (-69.079,-5.957,-72.904)
C4: (-69.832,-6.952,-73.497)
P: (-72.926,-1.780,-75.869)
C4': (-73.253,-5.647,-76.290)
C2': (-72.825,-7.254,-74.626)
O2': (-73.436,-8.377,-75.244)
N1: (-68.275,-7.678,-71.544)
N2: (-68.946,-9.830,-71.721)
N3: (-69.875,-8.269,-73.200)
N7: (-69.324,-4.723,-73.495)
N9: (-70.546,-6.309,-74.467)
O5': (-72.832,-3.361,-75.719)
O3': (-75.030,-6.260,-74.733)
OP2: (-72.149,-1.127,-74.764)
C3': (-73.650,-6.022,-74.875)
C1': (-71.530,-6.908,-75.364)
C5': (-73.450,-4.213,-76.660)
O6: (-67.446,-5.606,-71.161)
O4': (-71.848,-5.963,-76.353)
C8: (-70.208,-4.986,-74.418)
C2: (-69.059,-8.583,-72.194)
C6: (-68.210,-6.318,-71.833)
C5: (-69.079,-5.957,-72.904)
C4: (-69.832,-6.952,-73.497)
P: (-72.926,-1.780,-75.869)
C4': (-73.253,-5.647,-76.290)
C2': (-72.825,-7.254,-74.626)
O2': (-73.436,-8.377,-75.244)
N1: (-68.275,-7.678,-71.544)
N2: (-68.946,-9.830,-71.721)
N3: (-69.875,-8.269,-73.200)
N7: (-69.324,-4.723,-73.495)
N9: (-70.546,-6.309,-74.467)
O5': (-72.832,-3.361,-75.719)
O3': (-75.030,-6.260,-74.733)
OP1: (-63.316,-15.402,-71.756)
OP2: (-64.089,-12.983,-71.692)
C3': (-66.606,-16.317,-74.292)
C1': (-68.921,-15.848,-74.131)
C5': (-66.284,-16.144,-71.735)
O4': (-68.443,-16.123,-72.838)
C8: (-68.956,-13.475,-73.255)
O2': (-68.210,-17.628,-75.547)
C6: (-70.224,-11.448,-75.833)
C5: (-69.739,-12.393,-74.908)
C4: (-69.669,-13.712,-75.294)
P: (-64.346,-14.392,-71.382)
C4': (-67.105,-16.665,-72.899)
C2': (-67.876,-16.319,-75.130)
C2: (-70.459,-13.233,-77.274)
N1: (-70.579,-11.909,-77.045)
N3: (-70.019,-14.213,-76.476)
N6: (-70.340,-10.137,-75.613)
N7: (-69.282,-12.265,-73.618)
N9: (-69.170,-14.402,-74.231)
O5': (-65.775,-14.831,-71.968)
O3': (-65.639,-17.229,-74.759)
OP2: (-64.089,-12.983,-71.692)
C3': (-66.606,-16.317,-74.292)
C1': (-68.921,-15.848,-74.131)
C5': (-66.284,-16.144,-71.735)
O4': (-68.443,-16.123,-72.838)
C8: (-68.956,-13.475,-73.255)
O2': (-68.210,-17.628,-75.547)
C6: (-70.224,-11.448,-75.833)
C5: (-69.739,-12.393,-74.908)
C4: (-69.669,-13.712,-75.294)
P: (-64.346,-14.392,-71.382)
C4': (-67.105,-16.665,-72.899)
C2': (-67.876,-16.319,-75.130)
C2: (-70.459,-13.233,-77.274)
N1: (-70.579,-11.909,-77.045)
N3: (-70.019,-14.213,-76.476)
N6: (-70.340,-10.137,-75.613)
N7: (-69.282,-12.265,-73.618)
N9: (-69.170,-14.402,-74.231)
O5': (-65.775,-14.831,-71.968)
O3': (-65.639,-17.229,-74.759)
Image (generated by PyMOL):