Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A314:A97
Extra
PDB:
ATOM 1 O3' U A 313 114.411 47.481 -7.579 1.00 62.02 O
ATOM 2 P G A 314 113.197 48.131 -8.404 1.00 63.23 P
ATOM 3 OP1 G A 314 111.928 47.428 -8.040 1.00 64.28 O
ATOM 4 OP2 G A 314 113.619 48.176 -9.818 1.00 65.47 O
ATOM 5 O5' G A 314 113.115 49.603 -7.856 1.00 63.23 O
ATOM 6 C5' G A 314 112.510 49.872 -6.593 1.00 63.58 C
ATOM 7 C4' G A 314 113.111 51.110 -5.971 1.00 63.56 C
ATOM 8 O4' G A 314 114.536 51.101 -6.211 1.00 63.68 O
ATOM 9 C3' G A 314 112.648 52.468 -6.478 1.00 63.27 C
ATOM 10 O3' G A 314 111.468 52.881 -5.812 1.00 64.65 O
ATOM 11 C2' G A 314 113.818 53.352 -6.076 1.00 63.95 C
ATOM 12 O2' G A 314 113.803 53.651 -4.689 1.00 62.86 O
ATOM 13 C1' G A 314 115.000 52.427 -6.360 1.00 64.85 C
ATOM 14 N9 G A 314 115.439 52.596 -7.740 1.00 66.75 N
ATOM 15 C8 G A 314 114.989 51.906 -8.842 1.00 68.31 C
ATOM 16 N7 G A 314 115.516 52.325 -9.958 1.00 70.33 N
ATOM 17 C5 G A 314 116.373 53.349 -9.569 1.00 70.67 C
ATOM 18 C6 G A 314 117.202 54.200 -10.343 1.00 70.62 C
ATOM 19 O6 G A 314 117.345 54.224 -11.569 1.00 74.49 O
ATOM 20 N1 G A 314 117.900 55.098 -9.544 1.00 68.14 N
ATOM 21 C2 G A 314 117.806 55.176 -8.183 1.00 66.78 C
ATOM 22 N2 G A 314 118.541 56.116 -7.592 1.00 66.21 N
ATOM 23 N3 G A 314 117.040 54.393 -7.450 1.00 68.46 N
ATOM 24 C4 G A 314 116.352 53.511 -8.202 1.00 68.43 C
ATOM 25 P A A 315 110.220 53.456 -6.654 1.00 65.54 P
ATOM 26 OP1 A A 315 110.177 52.723 -7.965 1.00 64.37 O
ATOM 27 OP2 A A 315 109.040 53.454 -5.743 1.00 63.89 O
ATOM 28 O5' A A 315 110.611 54.973 -6.959 1.00 64.44 O
TER
ATOM 1 O3' G B 96 122.519 56.581 2.986 1.00 63.92 O
ATOM 2 P A B 97 123.502 56.647 1.704 1.00 64.89 P
ATOM 3 OP1 A B 97 123.902 55.249 1.384 1.00 65.46 O
ATOM 4 OP2 A B 97 124.557 57.665 1.921 1.00 64.69 O
ATOM 5 O5' A B 97 122.557 57.115 0.529 1.00 64.14 O
ATOM 6 C5' A B 97 121.882 58.378 0.595 1.00 65.97 C
ATOM 7 C4' A B 97 122.194 59.205 -0.631 1.00 66.22 C
ATOM 8 O4' A B 97 121.895 58.428 -1.820 1.00 67.75 O
ATOM 9 C3' A B 97 121.408 60.505 -0.756 1.00 65.81 C
ATOM 10 O3' A B 97 122.215 61.456 -1.410 1.00 64.73 O
ATOM 11 C2' A B 97 120.278 60.121 -1.707 1.00 66.62 C
ATOM 12 O2' A B 97 119.781 61.215 -2.451 1.00 69.24 O
ATOM 13 C1' A B 97 120.981 59.127 -2.628 1.00 65.80 C
ATOM 14 N9 A B 97 120.118 58.146 -3.267 1.00 63.80 N
ATOM 15 C8 A B 97 119.785 58.067 -4.590 1.00 65.19 C
ATOM 16 N7 A B 97 119.023 57.046 -4.883 1.00 65.17 N
ATOM 17 C5 A B 97 118.841 56.414 -3.666 1.00 65.43 C
ATOM 18 C6 A B 97 118.141 55.259 -3.303 1.00 66.47 C
ATOM 19 N6 A B 97 117.480 54.491 -4.172 1.00 66.25 N
ATOM 20 N1 A B 97 118.146 54.908 -1.998 1.00 67.03 N
ATOM 21 C2 A B 97 118.826 55.672 -1.132 1.00 66.80 C
ATOM 22 N3 A B 97 119.533 56.773 -1.359 1.00 66.16 N
ATOM 23 C4 A B 97 119.498 57.091 -2.660 1.00 64.59 C
ATOM 24 P C B 98 123.213 62.383 -0.570 1.00 66.13 P
ATOM 25 OP1 C B 98 123.458 63.583 -1.422 1.00 66.92 O
ATOM 26 OP2 C B 98 124.369 61.579 -0.120 1.00 66.34 O
ATOM 27 O5' C B 98 122.349 62.816 0.682 1.00 66.07 O
TER
ATOM 2 P G A 314 113.197 48.131 -8.404 1.00 63.23 P
ATOM 3 OP1 G A 314 111.928 47.428 -8.040 1.00 64.28 O
ATOM 4 OP2 G A 314 113.619 48.176 -9.818 1.00 65.47 O
ATOM 5 O5' G A 314 113.115 49.603 -7.856 1.00 63.23 O
ATOM 6 C5' G A 314 112.510 49.872 -6.593 1.00 63.58 C
ATOM 7 C4' G A 314 113.111 51.110 -5.971 1.00 63.56 C
ATOM 8 O4' G A 314 114.536 51.101 -6.211 1.00 63.68 O
ATOM 9 C3' G A 314 112.648 52.468 -6.478 1.00 63.27 C
ATOM 10 O3' G A 314 111.468 52.881 -5.812 1.00 64.65 O
ATOM 11 C2' G A 314 113.818 53.352 -6.076 1.00 63.95 C
ATOM 12 O2' G A 314 113.803 53.651 -4.689 1.00 62.86 O
ATOM 13 C1' G A 314 115.000 52.427 -6.360 1.00 64.85 C
ATOM 14 N9 G A 314 115.439 52.596 -7.740 1.00 66.75 N
ATOM 15 C8 G A 314 114.989 51.906 -8.842 1.00 68.31 C
ATOM 16 N7 G A 314 115.516 52.325 -9.958 1.00 70.33 N
ATOM 17 C5 G A 314 116.373 53.349 -9.569 1.00 70.67 C
ATOM 18 C6 G A 314 117.202 54.200 -10.343 1.00 70.62 C
ATOM 19 O6 G A 314 117.345 54.224 -11.569 1.00 74.49 O
ATOM 20 N1 G A 314 117.900 55.098 -9.544 1.00 68.14 N
ATOM 21 C2 G A 314 117.806 55.176 -8.183 1.00 66.78 C
ATOM 22 N2 G A 314 118.541 56.116 -7.592 1.00 66.21 N
ATOM 23 N3 G A 314 117.040 54.393 -7.450 1.00 68.46 N
ATOM 24 C4 G A 314 116.352 53.511 -8.202 1.00 68.43 C
ATOM 25 P A A 315 110.220 53.456 -6.654 1.00 65.54 P
ATOM 26 OP1 A A 315 110.177 52.723 -7.965 1.00 64.37 O
ATOM 27 OP2 A A 315 109.040 53.454 -5.743 1.00 63.89 O
ATOM 28 O5' A A 315 110.611 54.973 -6.959 1.00 64.44 O
TER
ATOM 1 O3' G B 96 122.519 56.581 2.986 1.00 63.92 O
ATOM 2 P A B 97 123.502 56.647 1.704 1.00 64.89 P
ATOM 3 OP1 A B 97 123.902 55.249 1.384 1.00 65.46 O
ATOM 4 OP2 A B 97 124.557 57.665 1.921 1.00 64.69 O
ATOM 5 O5' A B 97 122.557 57.115 0.529 1.00 64.14 O
ATOM 6 C5' A B 97 121.882 58.378 0.595 1.00 65.97 C
ATOM 7 C4' A B 97 122.194 59.205 -0.631 1.00 66.22 C
ATOM 8 O4' A B 97 121.895 58.428 -1.820 1.00 67.75 O
ATOM 9 C3' A B 97 121.408 60.505 -0.756 1.00 65.81 C
ATOM 10 O3' A B 97 122.215 61.456 -1.410 1.00 64.73 O
ATOM 11 C2' A B 97 120.278 60.121 -1.707 1.00 66.62 C
ATOM 12 O2' A B 97 119.781 61.215 -2.451 1.00 69.24 O
ATOM 13 C1' A B 97 120.981 59.127 -2.628 1.00 65.80 C
ATOM 14 N9 A B 97 120.118 58.146 -3.267 1.00 63.80 N
ATOM 15 C8 A B 97 119.785 58.067 -4.590 1.00 65.19 C
ATOM 16 N7 A B 97 119.023 57.046 -4.883 1.00 65.17 N
ATOM 17 C5 A B 97 118.841 56.414 -3.666 1.00 65.43 C
ATOM 18 C6 A B 97 118.141 55.259 -3.303 1.00 66.47 C
ATOM 19 N6 A B 97 117.480 54.491 -4.172 1.00 66.25 N
ATOM 20 N1 A B 97 118.146 54.908 -1.998 1.00 67.03 N
ATOM 21 C2 A B 97 118.826 55.672 -1.132 1.00 66.80 C
ATOM 22 N3 A B 97 119.533 56.773 -1.359 1.00 66.16 N
ATOM 23 C4 A B 97 119.498 57.091 -2.660 1.00 64.59 C
ATOM 24 P C B 98 123.213 62.383 -0.570 1.00 66.13 P
ATOM 25 OP1 C B 98 123.458 63.583 -1.422 1.00 66.92 O
ATOM 26 OP2 C B 98 124.369 61.579 -0.120 1.00 66.34 O
ATOM 27 O5' C B 98 122.349 62.816 0.682 1.00 66.07 O
TER
Atoms:
OP1: (111.928,47.428,-8.040)
OP2: (113.619,48.176,-9.818)
C3': (112.648,52.468,-6.478)
C1': (115.000,52.427,-6.360)
C5': (112.510,49.872,-6.593)
O6: (117.345,54.224,-11.569)
O4': (114.536,51.101,-6.211)
C8: (114.989,51.906,-8.842)
C2: (117.806,55.176,-8.183)
C6: (117.202,54.200,-10.343)
C5: (116.373,53.349,-9.569)
C4: (116.352,53.511,-8.202)
P: (113.197,48.131,-8.404)
C4': (113.111,51.110,-5.971)
C2': (113.818,53.352,-6.076)
O2': (113.803,53.651,-4.689)
N1: (117.900,55.098,-9.544)
N2: (118.541,56.116,-7.592)
N3: (117.040,54.393,-7.450)
N7: (115.516,52.325,-9.958)
N9: (115.439,52.596,-7.740)
O5': (113.115,49.603,-7.856)
O3': (111.468,52.881,-5.812)
OP2: (113.619,48.176,-9.818)
C3': (112.648,52.468,-6.478)
C1': (115.000,52.427,-6.360)
C5': (112.510,49.872,-6.593)
O6: (117.345,54.224,-11.569)
O4': (114.536,51.101,-6.211)
C8: (114.989,51.906,-8.842)
C2: (117.806,55.176,-8.183)
C6: (117.202,54.200,-10.343)
C5: (116.373,53.349,-9.569)
C4: (116.352,53.511,-8.202)
P: (113.197,48.131,-8.404)
C4': (113.111,51.110,-5.971)
C2': (113.818,53.352,-6.076)
O2': (113.803,53.651,-4.689)
N1: (117.900,55.098,-9.544)
N2: (118.541,56.116,-7.592)
N3: (117.040,54.393,-7.450)
N7: (115.516,52.325,-9.958)
N9: (115.439,52.596,-7.740)
O5': (113.115,49.603,-7.856)
O3': (111.468,52.881,-5.812)
OP1: (123.902,55.249,1.384)
OP2: (124.557,57.665,1.921)
C3': (121.408,60.505,-0.756)
C1': (120.981,59.127,-2.628)
C5': (121.882,58.378,0.595)
O4': (121.895,58.428,-1.820)
C8: (119.785,58.067,-4.590)
O2': (119.781,61.215,-2.451)
C6: (118.141,55.259,-3.303)
C5: (118.841,56.414,-3.666)
C4: (119.498,57.091,-2.660)
P: (123.502,56.647,1.704)
C4': (122.194,59.205,-0.631)
C2': (120.278,60.121,-1.707)
C2: (118.826,55.672,-1.132)
N1: (118.146,54.908,-1.998)
N3: (119.533,56.773,-1.359)
N6: (117.480,54.491,-4.172)
N7: (119.023,57.046,-4.883)
N9: (120.118,58.146,-3.267)
O5': (122.557,57.115,0.529)
O3': (122.215,61.456,-1.410)
OP2: (124.557,57.665,1.921)
C3': (121.408,60.505,-0.756)
C1': (120.981,59.127,-2.628)
C5': (121.882,58.378,0.595)
O4': (121.895,58.428,-1.820)
C8: (119.785,58.067,-4.590)
O2': (119.781,61.215,-2.451)
C6: (118.141,55.259,-3.303)
C5: (118.841,56.414,-3.666)
C4: (119.498,57.091,-2.660)
P: (123.502,56.647,1.704)
C4': (122.194,59.205,-0.631)
C2': (120.278,60.121,-1.707)
C2: (118.826,55.672,-1.132)
N1: (118.146,54.908,-1.998)
N3: (119.533,56.773,-1.359)
N6: (117.480,54.491,-4.172)
N7: (119.023,57.046,-4.883)
N9: (120.118,58.146,-3.267)
O5': (122.557,57.115,0.529)
O3': (122.215,61.456,-1.410)
Image (generated by PyMOL):