Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A472:A430
Extra
PDB:
ATOM 1 O3' G A 471 -47.277 8.875 87.246 1.00 47.17 O
ATOM 2 P G A 472 -48.228 9.856 86.400 1.00127.61 P
ATOM 3 OP1 G A 472 -49.610 9.315 86.479 1.00127.21 O
ATOM 4 OP2 G A 472 -47.598 10.076 85.069 1.00126.63 O
ATOM 5 O5' G A 472 -48.191 11.231 87.209 1.00 34.46 O
ATOM 6 C5' G A 472 -48.700 11.322 88.565 1.00 34.73 C
ATOM 7 C4' G A 472 -48.394 12.685 89.166 1.00 34.68 C
ATOM 8 O4' G A 472 -46.964 12.850 89.383 1.00 35.47 O
ATOM 9 C3' G A 472 -48.775 13.886 88.324 1.00 34.50 C
ATOM 10 O3' G A 472 -50.137 14.233 88.456 1.00 35.03 O
ATOM 11 C2' G A 472 -47.880 14.979 88.878 1.00 34.51 C
ATOM 12 O2' G A 472 -48.421 15.489 90.077 1.00 34.19 O
ATOM 13 C1' G A 472 -46.604 14.207 89.197 1.00 34.54 C
ATOM 14 N9 G A 472 -45.614 14.283 88.127 1.00 47.67 N
ATOM 15 C8 G A 472 -45.420 13.377 87.112 1.00 46.86 C
ATOM 16 N7 G A 472 -44.442 13.701 86.310 1.00 46.30 N
ATOM 17 C5 G A 472 -43.960 14.897 86.823 1.00 46.13 C
ATOM 18 C6 G A 472 -42.885 15.723 86.382 1.00 44.75 C
ATOM 19 O6 G A 472 -42.118 15.551 85.426 1.00 42.25 O
ATOM 20 N1 G A 472 -42.742 16.844 87.191 1.00 45.67 N
ATOM 21 C2 G A 472 -43.522 17.135 88.281 1.00 47.92 C
ATOM 22 N2 G A 472 -43.220 18.269 88.922 1.00 49.69 N
ATOM 23 N3 G A 472 -44.520 16.372 88.710 1.00 47.72 N
ATOM 24 C4 G A 472 -44.680 15.276 87.940 1.00 46.95 C
ATOM 25 P U A 473 -50.822 15.134 87.321 1.00 64.26 P
ATOM 26 OP1 U A 473 -51.983 14.404 86.753 1.00 43.29 O
ATOM 27 OP2 U A 473 -49.753 15.629 86.407 1.00 42.23 O
ATOM 28 O5' U A 473 -51.400 16.358 88.143 1.00 45.53 O
TER
ATOM 1 O3' A B 429 -40.002 22.481 89.383 1.00 53.20 O
ATOM 2 P A B 430 -39.503 21.747 90.712 1.00100.10 P
ATOM 3 OP1 A B 430 -38.024 21.829 90.784 1.00134.56 O
ATOM 4 OP2 A B 430 -40.169 20.422 90.798 1.00134.96 O
ATOM 5 O5' A B 430 -40.112 22.677 91.842 1.00 23.35 O
ATOM 6 C5' A B 430 -40.585 22.119 93.059 1.00 24.07 C
ATOM 7 C4' A B 430 -41.858 22.798 93.471 1.00 25.05 C
ATOM 8 O4' A B 430 -42.835 22.706 92.410 1.00 25.47 O
ATOM 9 C3' A B 430 -42.499 22.132 94.663 1.00 25.82 C
ATOM 10 O3' A B 430 -41.921 22.653 95.839 1.00 27.34 O
ATOM 11 C2' A B 430 -43.972 22.462 94.485 1.00 25.54 C
ATOM 12 O2' A B 430 -44.317 23.740 94.975 1.00 24.79 O
ATOM 13 C1' A B 430 -44.109 22.422 92.959 1.00 25.93 C
ATOM 14 N9 A B 430 -44.520 21.107 92.458 1.00 50.83 N
ATOM 15 C8 A B 430 -43.794 20.254 91.663 1.00 50.64 C
ATOM 16 N7 A B 430 -44.416 19.139 91.380 1.00 49.84 N
ATOM 17 C5 A B 430 -45.637 19.263 92.026 1.00 50.80 C
ATOM 18 C6 A B 430 -46.753 18.413 92.110 1.00 51.26 C
ATOM 19 N6 A B 430 -46.826 17.219 91.518 1.00 51.76 N
ATOM 20 N1 A B 430 -47.808 18.834 92.832 1.00 51.66 N
ATOM 21 C2 A B 430 -47.738 20.027 93.430 1.00 51.02 C
ATOM 22 N3 A B 430 -46.749 20.914 93.426 1.00 50.93 N
ATOM 23 C4 A B 430 -45.715 20.468 92.695 1.00 50.85 C
ATOM 24 P C B 431 -40.763 21.827 96.589 1.00 72.51 P
ATOM 25 OP1 C B 431 -39.942 22.786 97.370 1.00 51.51 O
ATOM 26 OP2 C B 431 -40.089 20.919 95.615 1.00 49.39 O
ATOM 27 O5' C B 431 -41.597 20.964 97.627 1.00 49.21 O
TER
ATOM 2 P G A 472 -48.228 9.856 86.400 1.00127.61 P
ATOM 3 OP1 G A 472 -49.610 9.315 86.479 1.00127.21 O
ATOM 4 OP2 G A 472 -47.598 10.076 85.069 1.00126.63 O
ATOM 5 O5' G A 472 -48.191 11.231 87.209 1.00 34.46 O
ATOM 6 C5' G A 472 -48.700 11.322 88.565 1.00 34.73 C
ATOM 7 C4' G A 472 -48.394 12.685 89.166 1.00 34.68 C
ATOM 8 O4' G A 472 -46.964 12.850 89.383 1.00 35.47 O
ATOM 9 C3' G A 472 -48.775 13.886 88.324 1.00 34.50 C
ATOM 10 O3' G A 472 -50.137 14.233 88.456 1.00 35.03 O
ATOM 11 C2' G A 472 -47.880 14.979 88.878 1.00 34.51 C
ATOM 12 O2' G A 472 -48.421 15.489 90.077 1.00 34.19 O
ATOM 13 C1' G A 472 -46.604 14.207 89.197 1.00 34.54 C
ATOM 14 N9 G A 472 -45.614 14.283 88.127 1.00 47.67 N
ATOM 15 C8 G A 472 -45.420 13.377 87.112 1.00 46.86 C
ATOM 16 N7 G A 472 -44.442 13.701 86.310 1.00 46.30 N
ATOM 17 C5 G A 472 -43.960 14.897 86.823 1.00 46.13 C
ATOM 18 C6 G A 472 -42.885 15.723 86.382 1.00 44.75 C
ATOM 19 O6 G A 472 -42.118 15.551 85.426 1.00 42.25 O
ATOM 20 N1 G A 472 -42.742 16.844 87.191 1.00 45.67 N
ATOM 21 C2 G A 472 -43.522 17.135 88.281 1.00 47.92 C
ATOM 22 N2 G A 472 -43.220 18.269 88.922 1.00 49.69 N
ATOM 23 N3 G A 472 -44.520 16.372 88.710 1.00 47.72 N
ATOM 24 C4 G A 472 -44.680 15.276 87.940 1.00 46.95 C
ATOM 25 P U A 473 -50.822 15.134 87.321 1.00 64.26 P
ATOM 26 OP1 U A 473 -51.983 14.404 86.753 1.00 43.29 O
ATOM 27 OP2 U A 473 -49.753 15.629 86.407 1.00 42.23 O
ATOM 28 O5' U A 473 -51.400 16.358 88.143 1.00 45.53 O
TER
ATOM 1 O3' A B 429 -40.002 22.481 89.383 1.00 53.20 O
ATOM 2 P A B 430 -39.503 21.747 90.712 1.00100.10 P
ATOM 3 OP1 A B 430 -38.024 21.829 90.784 1.00134.56 O
ATOM 4 OP2 A B 430 -40.169 20.422 90.798 1.00134.96 O
ATOM 5 O5' A B 430 -40.112 22.677 91.842 1.00 23.35 O
ATOM 6 C5' A B 430 -40.585 22.119 93.059 1.00 24.07 C
ATOM 7 C4' A B 430 -41.858 22.798 93.471 1.00 25.05 C
ATOM 8 O4' A B 430 -42.835 22.706 92.410 1.00 25.47 O
ATOM 9 C3' A B 430 -42.499 22.132 94.663 1.00 25.82 C
ATOM 10 O3' A B 430 -41.921 22.653 95.839 1.00 27.34 O
ATOM 11 C2' A B 430 -43.972 22.462 94.485 1.00 25.54 C
ATOM 12 O2' A B 430 -44.317 23.740 94.975 1.00 24.79 O
ATOM 13 C1' A B 430 -44.109 22.422 92.959 1.00 25.93 C
ATOM 14 N9 A B 430 -44.520 21.107 92.458 1.00 50.83 N
ATOM 15 C8 A B 430 -43.794 20.254 91.663 1.00 50.64 C
ATOM 16 N7 A B 430 -44.416 19.139 91.380 1.00 49.84 N
ATOM 17 C5 A B 430 -45.637 19.263 92.026 1.00 50.80 C
ATOM 18 C6 A B 430 -46.753 18.413 92.110 1.00 51.26 C
ATOM 19 N6 A B 430 -46.826 17.219 91.518 1.00 51.76 N
ATOM 20 N1 A B 430 -47.808 18.834 92.832 1.00 51.66 N
ATOM 21 C2 A B 430 -47.738 20.027 93.430 1.00 51.02 C
ATOM 22 N3 A B 430 -46.749 20.914 93.426 1.00 50.93 N
ATOM 23 C4 A B 430 -45.715 20.468 92.695 1.00 50.85 C
ATOM 24 P C B 431 -40.763 21.827 96.589 1.00 72.51 P
ATOM 25 OP1 C B 431 -39.942 22.786 97.370 1.00 51.51 O
ATOM 26 OP2 C B 431 -40.089 20.919 95.615 1.00 49.39 O
ATOM 27 O5' C B 431 -41.597 20.964 97.627 1.00 49.21 O
TER
Atoms:
OP1: (-49.610,9.315,86.479)
OP2: (-47.598,10.076,85.069)
C3': (-48.775,13.886,88.324)
C1': (-46.604,14.207,89.197)
C5': (-48.700,11.322,88.565)
O6: (-42.118,15.551,85.426)
O4': (-46.964,12.850,89.383)
C8: (-45.420,13.377,87.112)
C2: (-43.522,17.135,88.281)
C6: (-42.885,15.723,86.382)
C5: (-43.960,14.897,86.823)
C4: (-44.680,15.276,87.940)
P: (-48.228,9.856,86.400)
C4': (-48.394,12.685,89.166)
C2': (-47.880,14.979,88.878)
O2': (-48.421,15.489,90.077)
N1: (-42.742,16.844,87.191)
N2: (-43.220,18.269,88.922)
N3: (-44.520,16.372,88.710)
N7: (-44.442,13.701,86.310)
N9: (-45.614,14.283,88.127)
O5': (-48.191,11.231,87.209)
O3': (-50.137,14.233,88.456)
OP2: (-47.598,10.076,85.069)
C3': (-48.775,13.886,88.324)
C1': (-46.604,14.207,89.197)
C5': (-48.700,11.322,88.565)
O6: (-42.118,15.551,85.426)
O4': (-46.964,12.850,89.383)
C8: (-45.420,13.377,87.112)
C2: (-43.522,17.135,88.281)
C6: (-42.885,15.723,86.382)
C5: (-43.960,14.897,86.823)
C4: (-44.680,15.276,87.940)
P: (-48.228,9.856,86.400)
C4': (-48.394,12.685,89.166)
C2': (-47.880,14.979,88.878)
O2': (-48.421,15.489,90.077)
N1: (-42.742,16.844,87.191)
N2: (-43.220,18.269,88.922)
N3: (-44.520,16.372,88.710)
N7: (-44.442,13.701,86.310)
N9: (-45.614,14.283,88.127)
O5': (-48.191,11.231,87.209)
O3': (-50.137,14.233,88.456)
OP1: (-38.024,21.829,90.784)
OP2: (-40.169,20.422,90.798)
C3': (-42.499,22.132,94.663)
C1': (-44.109,22.422,92.959)
C5': (-40.585,22.119,93.059)
O4': (-42.835,22.706,92.410)
C8: (-43.794,20.254,91.663)
O2': (-44.317,23.740,94.975)
C6: (-46.753,18.413,92.110)
C5: (-45.637,19.263,92.026)
C4: (-45.715,20.468,92.695)
P: (-39.503,21.747,90.712)
C4': (-41.858,22.798,93.471)
C2': (-43.972,22.462,94.485)
C2: (-47.738,20.027,93.430)
N1: (-47.808,18.834,92.832)
N3: (-46.749,20.914,93.426)
N6: (-46.826,17.219,91.518)
N7: (-44.416,19.139,91.380)
N9: (-44.520,21.107,92.458)
O5': (-40.112,22.677,91.842)
O3': (-41.921,22.653,95.839)
OP2: (-40.169,20.422,90.798)
C3': (-42.499,22.132,94.663)
C1': (-44.109,22.422,92.959)
C5': (-40.585,22.119,93.059)
O4': (-42.835,22.706,92.410)
C8: (-43.794,20.254,91.663)
O2': (-44.317,23.740,94.975)
C6: (-46.753,18.413,92.110)
C5: (-45.637,19.263,92.026)
C4: (-45.715,20.468,92.695)
P: (-39.503,21.747,90.712)
C4': (-41.858,22.798,93.471)
C2': (-43.972,22.462,94.485)
C2: (-47.738,20.027,93.430)
N1: (-47.808,18.834,92.832)
N3: (-46.749,20.914,93.426)
N6: (-46.826,17.219,91.518)
N7: (-44.416,19.139,91.380)
N9: (-44.520,21.107,92.458)
O5': (-40.112,22.677,91.842)
O3': (-41.921,22.653,95.839)
Image (generated by PyMOL):