ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:B61:B36

Extra

PDB:
ATOM 1 O3' G A 60 -31.198 -72.191 74.064 1.00 81.55 O
ATOM 2 P G A 61 -31.795 -71.872 75.515 1.00 81.42 P
ATOM 3 OP1 G A 61 -30.652 -71.442 76.349 1.00 82.52 O
ATOM 4 OP2 G A 61 -32.691 -72.941 76.003 1.00 81.53 O
ATOM 5 O5' G A 61 -32.714 -70.607 75.283 1.00 83.97 O
ATOM 6 C5' G A 61 -32.731 -69.917 74.045 1.00 84.51 C
ATOM 7 C4' G A 61 -34.155 -69.740 73.614 1.00 84.59 C
ATOM 8 O4' G A 61 -34.603 -70.933 72.967 1.00 86.44 O
ATOM 9 C3' G A 61 -35.133 -69.455 74.746 1.00 85.08 C
ATOM 10 O3' G A 61 -35.038 -68.021 74.808 1.00 81.90 O
ATOM 11 C2' G A 61 -36.437 -69.999 74.178 1.00 86.61 C
ATOM 12 O2' G A 61 -37.030 -69.070 73.305 1.00 92.06 O
ATOM 13 C1' G A 61 -35.944 -71.170 73.313 1.00 88.05 C
ATOM 14 N9 G A 61 -36.017 -72.560 73.747 1.00 89.28 N
ATOM 15 C8 G A 61 -35.337 -73.161 74.773 1.00 88.35 C
ATOM 16 N7 G A 61 -35.496 -74.458 74.798 1.00 90.31 N
ATOM 17 C5 G A 61 -36.363 -74.721 73.747 1.00 90.47 C
ATOM 18 C6 G A 61 -36.901 -75.961 73.265 1.00 92.47 C
ATOM 19 O6 G A 61 -36.685 -77.127 73.675 1.00 91.52 O
ATOM 20 N1 G A 61 -37.756 -75.749 72.184 1.00 91.41 N
ATOM 21 C2 G A 61 -38.036 -74.522 71.628 1.00 88.44 C
ATOM 22 N2 G A 61 -38.863 -74.520 70.600 1.00 87.13 N
ATOM 23 N3 G A 61 -37.536 -73.384 72.051 1.00 88.09 N
ATOM 24 C4 G A 61 -36.716 -73.555 73.107 1.00 89.25 C
ATOM 25 P C A 62 -36.144 -67.094 75.542 1.00 78.01 P
ATOM 26 OP1 C A 62 -37.229 -66.718 74.619 1.00 75.25 O
ATOM 27 OP2 C A 62 -35.228 -66.049 76.018 1.00 83.76 O
ATOM 28 O5' C A 62 -36.678 -67.863 76.838 1.00 79.37 O
TER

ATOM 1 O3' C B 35 -41.279 -74.752 66.934 1.00 82.77 O
ATOM 2 P A B 36 -39.866 -75.314 66.428 1.00 84.84 P
ATOM 3 OP1 A B 36 -40.058 -76.639 65.788 1.00 88.27 O
ATOM 4 OP2 A B 36 -38.798 -75.148 67.455 1.00 86.56 O
ATOM 5 O5' A B 36 -39.578 -74.243 65.294 1.00 84.11 O
ATOM 6 C5' A B 36 -40.658 -73.776 64.485 1.00 84.83 C
ATOM 7 C4' A B 36 -40.583 -72.280 64.301 1.00 85.72 C
ATOM 8 O4' A B 36 -41.095 -71.578 65.464 1.00 85.82 O
ATOM 9 C3' A B 36 -39.201 -71.734 64.064 1.00 86.63 C
ATOM 10 O3' A B 36 -38.948 -71.790 62.675 1.00 87.78 O
ATOM 11 C2' A B 36 -39.352 -70.294 64.522 1.00 86.70 C
ATOM 12 O2' A B 36 -39.934 -69.547 63.472 1.00 86.31 O
ATOM 13 C1' A B 36 -40.312 -70.433 65.717 1.00 86.64 C
ATOM 14 N9 A B 36 -39.639 -70.664 66.995 1.00 87.15 N
ATOM 15 C8 A B 36 -39.925 -71.670 67.880 1.00 86.57 C
ATOM 16 N7 A B 36 -39.137 -71.702 68.922 1.00 88.36 N
ATOM 17 C5 A B 36 -38.276 -70.634 68.721 1.00 89.64 C
ATOM 18 C6 A B 36 -37.194 -70.139 69.474 1.00 90.88 C
ATOM 19 N6 A B 36 -36.779 -70.681 70.630 1.00 88.99 N
ATOM 20 N1 A B 36 -36.545 -69.056 68.992 1.00 90.68 N
ATOM 21 C2 A B 36 -36.965 -68.516 67.837 1.00 90.40 C
ATOM 22 N3 A B 36 -37.961 -68.895 67.040 1.00 88.81 N
ATOM 23 C4 A B 36 -38.585 -69.973 67.544 1.00 88.94 C
ATOM 24 P A B 37 -37.454 -72.024 62.155 1.00 90.43 P
ATOM 25 OP1 A B 37 -37.467 -72.060 60.672 1.00 92.15 O
ATOM 26 OP2 A B 37 -36.845 -73.154 62.920 1.00 88.38 O
ATOM 27 O5' A B 37 -36.703 -70.703 62.605 1.00 91.14 O
TER

Atoms:
OP1: (-30.652,-71.442,76.349)
OP2: (-32.691,-72.941,76.003)
C3': (-35.133,-69.455,74.746)
C1': (-35.944,-71.170,73.313)
C5': (-32.731,-69.917,74.045)
O6: (-36.685,-77.127,73.675)
O4': (-34.603,-70.933,72.967)
C8: (-35.337,-73.161,74.773)
C2: (-38.036,-74.522,71.628)
C6: (-36.901,-75.961,73.265)
C5: (-36.363,-74.721,73.747)
C4: (-36.716,-73.555,73.107)
P: (-31.795,-71.872,75.515)
C4': (-34.155,-69.740,73.614)
C2': (-36.437,-69.999,74.178)
O2': (-37.030,-69.070,73.305)
N1: (-37.756,-75.749,72.184)
N2: (-38.863,-74.520,70.600)
N3: (-37.536,-73.384,72.051)
N7: (-35.496,-74.458,74.798)
N9: (-36.017,-72.560,73.747)
O5': (-32.714,-70.607,75.283)
O3': (-35.038,-68.021,74.808)
OP1: (-40.058,-76.639,65.788)
OP2: (-38.798,-75.148,67.455)
C3': (-39.201,-71.734,64.064)
C1': (-40.312,-70.433,65.717)
C5': (-40.658,-73.776,64.485)
O4': (-41.095,-71.578,65.464)
C8: (-39.925,-71.670,67.880)
O2': (-39.934,-69.547,63.472)
C6: (-37.194,-70.139,69.474)
C5: (-38.276,-70.634,68.721)
C4: (-38.585,-69.973,67.544)
P: (-39.866,-75.314,66.428)
C4': (-40.583,-72.280,64.301)
C2': (-39.352,-70.294,64.522)
C2: (-36.965,-68.516,67.837)
N1: (-36.545,-69.056,68.992)
N3: (-37.961,-68.895,67.040)
N6: (-36.779,-70.681,70.630)
N7: (-39.137,-71.702,68.922)
N9: (-39.639,-70.664,66.995)
O5': (-39.578,-74.243,65.294)
O3': (-38.948,-71.790,62.675)
Image (generated by PyMOL):
PyMOL image
show in jmol