Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:912:99
Extra
PDB:
ATOM 1 O3' C A 11 52.864 36.415 111.140 1.00 55.32 O
ATOM 2 P A A 12 54.331 35.938 111.586 1.00 56.01 P
ATOM 3 OP1 A A 12 54.157 34.908 112.645 1.00 57.07 O
ATOM 4 OP2 A A 12 55.141 37.147 111.885 1.00 57.58 O
ATOM 5 O5' A A 12 54.909 35.240 110.273 1.00 54.80 O
ATOM 6 C5' A A 12 54.796 33.818 110.092 1.00 54.92 C
ATOM 7 C4' A A 12 55.532 33.379 108.848 1.00 55.05 C
ATOM 8 O4' A A 12 54.771 33.756 107.669 1.00 54.84 O
ATOM 9 C3' A A 12 56.934 33.953 108.652 1.00 54.78 C
ATOM 10 O3' A A 12 57.746 32.974 107.986 1.00 54.15 O
ATOM 11 C2' A A 12 56.654 35.125 107.714 1.00 54.75 C
ATOM 12 O2' A A 12 57.763 35.547 106.949 1.00 56.57 O
ATOM 13 C1' A A 12 55.598 34.504 106.806 1.00 55.02 C
ATOM 14 N9 A A 12 54.781 35.458 106.058 1.00 54.69 N
ATOM 15 C8 A A 12 53.652 36.131 106.457 1.00 54.41 C
ATOM 16 N7 A A 12 53.163 36.929 105.539 1.00 54.36 N
ATOM 17 C5 A A 12 54.028 36.771 104.464 1.00 53.91 C
ATOM 18 C6 A A 12 54.063 37.351 103.187 1.00 53.20 C
ATOM 19 N6 A A 12 53.168 38.244 102.753 1.00 53.68 N
ATOM 20 N1 A A 12 55.060 36.979 102.356 1.00 52.80 N
ATOM 21 C2 A A 12 55.953 36.082 102.787 1.00 53.36 C
ATOM 22 N3 A A 12 56.026 35.467 103.963 1.00 54.70 N
ATOM 23 C4 A A 12 55.023 35.863 104.767 1.00 54.36 C
ATOM 24 P G A 13 59.080 32.408 108.693 1.00 53.70 P
ATOM 25 OP1 G A 13 59.568 31.248 107.902 1.00 55.31 O
ATOM 26 OP2 G A 13 58.813 32.246 110.145 1.00 54.21 O
ATOM 27 O5' G A 13 60.170 33.552 108.496 1.00 55.43 O
TER
ATOM 1 O3' C B 8 51.806 41.682 98.381 1.00 46.19 O
ATOM 2 P C B 9 53.149 42.564 98.277 1.00 46.26 P
ATOM 3 OP1 C B 9 52.797 43.928 98.751 1.00 47.84 O
ATOM 4 OP2 C B 9 53.728 42.382 96.919 1.00 47.04 O
ATOM 5 O5' C B 9 54.177 41.908 99.307 1.00 45.80 O
ATOM 6 C5' C B 9 53.815 41.680 100.680 1.00 44.86 C
ATOM 7 C4' C B 9 54.826 40.765 101.348 1.00 44.88 C
ATOM 8 O4' C B 9 54.905 39.522 100.591 1.00 43.10 O
ATOM 9 C3' C B 9 56.263 41.282 101.473 1.00 44.98 C
ATOM 10 O3' C B 9 56.835 40.801 102.688 1.00 47.70 O
ATOM 11 C2' C B 9 56.960 40.617 100.288 1.00 43.45 C
ATOM 12 O2' C B 9 58.343 40.401 100.487 1.00 43.42 O
ATOM 13 C1' C B 9 56.247 39.271 100.234 1.00 43.14 C
ATOM 14 N1 C B 9 56.278 38.647 98.900 1.00 43.65 N
ATOM 15 C2 C B 9 56.953 37.427 98.740 1.00 44.91 C
ATOM 16 O2 C B 9 57.471 36.882 99.738 1.00 47.20 O
ATOM 17 N3 C B 9 57.025 36.869 97.507 1.00 44.00 N
ATOM 18 C4 C B 9 56.450 37.474 96.465 1.00 43.96 C
ATOM 19 N4 C B 9 56.565 36.897 95.261 1.00 44.54 N
ATOM 20 C5 C B 9 55.739 38.700 96.605 1.00 43.97 C
ATOM 21 C6 C B 9 55.678 39.246 97.828 1.00 44.19 C
ATOM 22 P A B 10 56.898 41.754 103.988 1.00 49.79 P
ATOM 23 OP1 A B 10 55.579 42.417 104.203 1.00 50.34 O
ATOM 24 OP2 A B 10 58.124 42.578 103.890 1.00 51.83 O
ATOM 25 O5' A B 10 57.135 40.731 105.185 1.00 51.00 O
TER
ATOM 2 P A A 12 54.331 35.938 111.586 1.00 56.01 P
ATOM 3 OP1 A A 12 54.157 34.908 112.645 1.00 57.07 O
ATOM 4 OP2 A A 12 55.141 37.147 111.885 1.00 57.58 O
ATOM 5 O5' A A 12 54.909 35.240 110.273 1.00 54.80 O
ATOM 6 C5' A A 12 54.796 33.818 110.092 1.00 54.92 C
ATOM 7 C4' A A 12 55.532 33.379 108.848 1.00 55.05 C
ATOM 8 O4' A A 12 54.771 33.756 107.669 1.00 54.84 O
ATOM 9 C3' A A 12 56.934 33.953 108.652 1.00 54.78 C
ATOM 10 O3' A A 12 57.746 32.974 107.986 1.00 54.15 O
ATOM 11 C2' A A 12 56.654 35.125 107.714 1.00 54.75 C
ATOM 12 O2' A A 12 57.763 35.547 106.949 1.00 56.57 O
ATOM 13 C1' A A 12 55.598 34.504 106.806 1.00 55.02 C
ATOM 14 N9 A A 12 54.781 35.458 106.058 1.00 54.69 N
ATOM 15 C8 A A 12 53.652 36.131 106.457 1.00 54.41 C
ATOM 16 N7 A A 12 53.163 36.929 105.539 1.00 54.36 N
ATOM 17 C5 A A 12 54.028 36.771 104.464 1.00 53.91 C
ATOM 18 C6 A A 12 54.063 37.351 103.187 1.00 53.20 C
ATOM 19 N6 A A 12 53.168 38.244 102.753 1.00 53.68 N
ATOM 20 N1 A A 12 55.060 36.979 102.356 1.00 52.80 N
ATOM 21 C2 A A 12 55.953 36.082 102.787 1.00 53.36 C
ATOM 22 N3 A A 12 56.026 35.467 103.963 1.00 54.70 N
ATOM 23 C4 A A 12 55.023 35.863 104.767 1.00 54.36 C
ATOM 24 P G A 13 59.080 32.408 108.693 1.00 53.70 P
ATOM 25 OP1 G A 13 59.568 31.248 107.902 1.00 55.31 O
ATOM 26 OP2 G A 13 58.813 32.246 110.145 1.00 54.21 O
ATOM 27 O5' G A 13 60.170 33.552 108.496 1.00 55.43 O
TER
ATOM 1 O3' C B 8 51.806 41.682 98.381 1.00 46.19 O
ATOM 2 P C B 9 53.149 42.564 98.277 1.00 46.26 P
ATOM 3 OP1 C B 9 52.797 43.928 98.751 1.00 47.84 O
ATOM 4 OP2 C B 9 53.728 42.382 96.919 1.00 47.04 O
ATOM 5 O5' C B 9 54.177 41.908 99.307 1.00 45.80 O
ATOM 6 C5' C B 9 53.815 41.680 100.680 1.00 44.86 C
ATOM 7 C4' C B 9 54.826 40.765 101.348 1.00 44.88 C
ATOM 8 O4' C B 9 54.905 39.522 100.591 1.00 43.10 O
ATOM 9 C3' C B 9 56.263 41.282 101.473 1.00 44.98 C
ATOM 10 O3' C B 9 56.835 40.801 102.688 1.00 47.70 O
ATOM 11 C2' C B 9 56.960 40.617 100.288 1.00 43.45 C
ATOM 12 O2' C B 9 58.343 40.401 100.487 1.00 43.42 O
ATOM 13 C1' C B 9 56.247 39.271 100.234 1.00 43.14 C
ATOM 14 N1 C B 9 56.278 38.647 98.900 1.00 43.65 N
ATOM 15 C2 C B 9 56.953 37.427 98.740 1.00 44.91 C
ATOM 16 O2 C B 9 57.471 36.882 99.738 1.00 47.20 O
ATOM 17 N3 C B 9 57.025 36.869 97.507 1.00 44.00 N
ATOM 18 C4 C B 9 56.450 37.474 96.465 1.00 43.96 C
ATOM 19 N4 C B 9 56.565 36.897 95.261 1.00 44.54 N
ATOM 20 C5 C B 9 55.739 38.700 96.605 1.00 43.97 C
ATOM 21 C6 C B 9 55.678 39.246 97.828 1.00 44.19 C
ATOM 22 P A B 10 56.898 41.754 103.988 1.00 49.79 P
ATOM 23 OP1 A B 10 55.579 42.417 104.203 1.00 50.34 O
ATOM 24 OP2 A B 10 58.124 42.578 103.890 1.00 51.83 O
ATOM 25 O5' A B 10 57.135 40.731 105.185 1.00 51.00 O
TER
Atoms:
OP1: (54.157,34.908,112.645)
OP2: (55.141,37.147,111.885)
C3': (56.934,33.953,108.652)
C1': (55.598,34.504,106.806)
C5': (54.796,33.818,110.092)
O4': (54.771,33.756,107.669)
C8: (53.652,36.131,106.457)
O2': (57.763,35.547,106.949)
C6: (54.063,37.351,103.187)
C5: (54.028,36.771,104.464)
C4: (55.023,35.863,104.767)
P: (54.331,35.938,111.586)
C4': (55.532,33.379,108.848)
C2': (56.654,35.125,107.714)
C2: (55.953,36.082,102.787)
N1: (55.060,36.979,102.356)
N3: (56.026,35.467,103.963)
N6: (53.168,38.244,102.753)
N7: (53.163,36.929,105.539)
N9: (54.781,35.458,106.058)
O5': (54.909,35.240,110.273)
O3': (57.746,32.974,107.986)
OP2: (55.141,37.147,111.885)
C3': (56.934,33.953,108.652)
C1': (55.598,34.504,106.806)
C5': (54.796,33.818,110.092)
O4': (54.771,33.756,107.669)
C8: (53.652,36.131,106.457)
O2': (57.763,35.547,106.949)
C6: (54.063,37.351,103.187)
C5: (54.028,36.771,104.464)
C4: (55.023,35.863,104.767)
P: (54.331,35.938,111.586)
C4': (55.532,33.379,108.848)
C2': (56.654,35.125,107.714)
C2: (55.953,36.082,102.787)
N1: (55.060,36.979,102.356)
N3: (56.026,35.467,103.963)
N6: (53.168,38.244,102.753)
N7: (53.163,36.929,105.539)
N9: (54.781,35.458,106.058)
O5': (54.909,35.240,110.273)
O3': (57.746,32.974,107.986)
C2: (56.953,37.427,98.740)
OP1: (52.797,43.928,98.751)
OP2: (53.728,42.382,96.919)
C4: (56.450,37.474,96.465)
O5': (54.177,41.908,99.307)
C3': (56.263,41.282,101.473)
C1': (56.247,39.271,100.234)
O4': (54.905,39.522,100.591)
C5': (53.815,41.680,100.680)
P: (53.149,42.564,98.277)
O2: (57.471,36.882,99.738)
C4': (54.826,40.765,101.348)
C2': (56.960,40.617,100.288)
O2': (58.343,40.401,100.487)
N1: (56.278,38.647,98.900)
N3: (57.025,36.869,97.507)
N4: (56.565,36.897,95.261)
C6: (55.678,39.246,97.828)
C5: (55.739,38.700,96.605)
O3': (56.835,40.801,102.688)
OP1: (52.797,43.928,98.751)
OP2: (53.728,42.382,96.919)
C4: (56.450,37.474,96.465)
O5': (54.177,41.908,99.307)
C3': (56.263,41.282,101.473)
C1': (56.247,39.271,100.234)
O4': (54.905,39.522,100.591)
C5': (53.815,41.680,100.680)
P: (53.149,42.564,98.277)
O2: (57.471,36.882,99.738)
C4': (54.826,40.765,101.348)
C2': (56.960,40.617,100.288)
O2': (58.343,40.401,100.487)
N1: (56.278,38.647,98.900)
N3: (57.025,36.869,97.507)
N4: (56.565,36.897,95.261)
C6: (55.678,39.246,97.828)
C5: (55.739,38.700,96.605)
O3': (56.835,40.801,102.688)
Image (generated by PyMOL):