Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11868:11871
Extra
PDB:
ATOM 1 O3' C A1867 -21.690 20.329 87.128 1.00 57.25 O
ATOM 2 P U A1868 -22.387 19.800 88.465 1.00 56.69 P
ATOM 3 OP1 U A1868 -22.512 18.331 88.349 1.00 56.41 O
ATOM 4 OP2 U A1868 -23.628 20.614 88.666 1.00 57.25 O
ATOM 5 O5' U A1868 -21.315 20.148 89.581 1.00 56.58 O
ATOM 6 C5' U A1868 -20.266 19.251 89.902 1.00 56.13 C
ATOM 7 C4' U A1868 -19.509 19.724 91.107 1.00 56.17 C
ATOM 8 O4' U A1868 -19.150 21.114 90.942 1.00 56.35 O
ATOM 9 C3' U A1868 -20.273 19.682 92.414 1.00 56.54 C
ATOM 10 O3' U A1868 -20.208 18.425 93.017 1.00 56.35 O
ATOM 11 C2' U A1868 -19.600 20.744 93.239 1.00 56.70 C
ATOM 12 O2' U A1868 -18.427 20.231 93.827 1.00 56.35 O
ATOM 13 C1' U A1868 -19.218 21.774 92.178 1.00 56.67 C
ATOM 14 N1 U A1868 -20.226 22.836 92.085 1.00 57.18 N
ATOM 15 C2 U A1868 -20.100 23.873 92.980 1.00 57.51 C
ATOM 16 O2 U A1868 -19.174 23.917 93.770 1.00 57.37 O
ATOM 17 N3 U A1868 -21.057 24.867 92.883 1.00 58.00 N
ATOM 18 C4 U A1868 -22.123 24.873 91.995 1.00 58.18 C
ATOM 19 O4 U A1868 -22.937 25.792 92.022 1.00 58.65 O
ATOM 20 C5 U A1868 -22.185 23.745 91.118 1.00 57.82 C
ATOM 21 C6 U A1868 -21.265 22.785 91.196 1.00 57.34 C
ATOM 22 P U A1869 -21.334 17.953 94.056 1.00 49.26 P
ATOM 23 OP1 U A1869 -21.401 16.470 93.956 1.00 48.98 O
ATOM 24 OP2 U A1869 -22.566 18.766 93.792 1.00 49.74 O
ATOM 25 O5' U A1869 -20.734 18.351 95.463 1.00 49.39 O
TER
ATOM 1 O3' C B1870 -21.191 25.074 101.003 1.00 56.08 O
ATOM 2 P G B1871 -21.070 25.621 102.491 1.00 51.94 P
ATOM 3 OP1 G B1871 -21.504 24.539 103.413 1.00 51.98 O
ATOM 4 OP2 G B1871 -21.769 26.919 102.528 1.00 52.48 O
ATOM 5 O5' G B1871 -19.528 25.846 102.643 1.00 51.61 O
ATOM 6 C5' G B1871 -18.813 26.595 101.700 1.00 51.42 C
ATOM 7 C4' G B1871 -17.373 26.235 101.764 1.00 50.97 C
ATOM 8 O4' G B1871 -17.231 24.818 101.564 1.00 50.54 O
ATOM 9 C3' G B1871 -16.473 26.888 100.737 1.00 50.70 C
ATOM 10 O3' G B1871 -16.019 28.134 101.208 1.00 51.00 O
ATOM 11 C2' G B1871 -15.341 25.878 100.571 1.00 50.13 C
ATOM 12 O2' G B1871 -14.324 26.140 101.528 1.00 50.13 O
ATOM 13 C1' G B1871 -16.023 24.539 100.924 1.00 50.04 C
ATOM 14 N9 G B1871 -16.320 23.694 99.754 1.00 49.69 N
ATOM 15 C8 G B1871 -15.969 22.372 99.674 1.00 49.28 C
ATOM 16 N7 G B1871 -16.343 21.771 98.596 1.00 49.04 N
ATOM 17 C5 G B1871 -17.014 22.766 97.921 1.00 49.33 C
ATOM 18 C6 G B1871 -17.648 22.684 96.667 1.00 49.26 C
ATOM 19 O6 G B1871 -17.736 21.717 95.899 1.00 48.94 O
ATOM 20 N1 G B1871 -18.227 23.884 96.344 1.00 49.64 N
ATOM 21 C2 G B1871 -18.203 25.010 97.112 1.00 50.03 C
ATOM 22 N2 G B1871 -18.860 26.060 96.573 1.00 50.38 N
ATOM 23 N3 G B1871 -17.608 25.102 98.295 1.00 50.10 N
ATOM 24 C4 G B1871 -17.033 23.948 98.625 1.00 49.73 C
ATOM 25 P G B1872 -15.564 29.289 100.205 1.00 50.32 P
ATOM 26 OP1 G B1872 -15.057 30.423 101.056 1.00 50.66 O
ATOM 27 OP2 G B1872 -16.708 29.539 99.279 1.00 50.50 O
ATOM 28 O5' G B1872 -14.354 28.598 99.428 1.00 49.68 O
TER
ATOM 2 P U A1868 -22.387 19.800 88.465 1.00 56.69 P
ATOM 3 OP1 U A1868 -22.512 18.331 88.349 1.00 56.41 O
ATOM 4 OP2 U A1868 -23.628 20.614 88.666 1.00 57.25 O
ATOM 5 O5' U A1868 -21.315 20.148 89.581 1.00 56.58 O
ATOM 6 C5' U A1868 -20.266 19.251 89.902 1.00 56.13 C
ATOM 7 C4' U A1868 -19.509 19.724 91.107 1.00 56.17 C
ATOM 8 O4' U A1868 -19.150 21.114 90.942 1.00 56.35 O
ATOM 9 C3' U A1868 -20.273 19.682 92.414 1.00 56.54 C
ATOM 10 O3' U A1868 -20.208 18.425 93.017 1.00 56.35 O
ATOM 11 C2' U A1868 -19.600 20.744 93.239 1.00 56.70 C
ATOM 12 O2' U A1868 -18.427 20.231 93.827 1.00 56.35 O
ATOM 13 C1' U A1868 -19.218 21.774 92.178 1.00 56.67 C
ATOM 14 N1 U A1868 -20.226 22.836 92.085 1.00 57.18 N
ATOM 15 C2 U A1868 -20.100 23.873 92.980 1.00 57.51 C
ATOM 16 O2 U A1868 -19.174 23.917 93.770 1.00 57.37 O
ATOM 17 N3 U A1868 -21.057 24.867 92.883 1.00 58.00 N
ATOM 18 C4 U A1868 -22.123 24.873 91.995 1.00 58.18 C
ATOM 19 O4 U A1868 -22.937 25.792 92.022 1.00 58.65 O
ATOM 20 C5 U A1868 -22.185 23.745 91.118 1.00 57.82 C
ATOM 21 C6 U A1868 -21.265 22.785 91.196 1.00 57.34 C
ATOM 22 P U A1869 -21.334 17.953 94.056 1.00 49.26 P
ATOM 23 OP1 U A1869 -21.401 16.470 93.956 1.00 48.98 O
ATOM 24 OP2 U A1869 -22.566 18.766 93.792 1.00 49.74 O
ATOM 25 O5' U A1869 -20.734 18.351 95.463 1.00 49.39 O
TER
ATOM 1 O3' C B1870 -21.191 25.074 101.003 1.00 56.08 O
ATOM 2 P G B1871 -21.070 25.621 102.491 1.00 51.94 P
ATOM 3 OP1 G B1871 -21.504 24.539 103.413 1.00 51.98 O
ATOM 4 OP2 G B1871 -21.769 26.919 102.528 1.00 52.48 O
ATOM 5 O5' G B1871 -19.528 25.846 102.643 1.00 51.61 O
ATOM 6 C5' G B1871 -18.813 26.595 101.700 1.00 51.42 C
ATOM 7 C4' G B1871 -17.373 26.235 101.764 1.00 50.97 C
ATOM 8 O4' G B1871 -17.231 24.818 101.564 1.00 50.54 O
ATOM 9 C3' G B1871 -16.473 26.888 100.737 1.00 50.70 C
ATOM 10 O3' G B1871 -16.019 28.134 101.208 1.00 51.00 O
ATOM 11 C2' G B1871 -15.341 25.878 100.571 1.00 50.13 C
ATOM 12 O2' G B1871 -14.324 26.140 101.528 1.00 50.13 O
ATOM 13 C1' G B1871 -16.023 24.539 100.924 1.00 50.04 C
ATOM 14 N9 G B1871 -16.320 23.694 99.754 1.00 49.69 N
ATOM 15 C8 G B1871 -15.969 22.372 99.674 1.00 49.28 C
ATOM 16 N7 G B1871 -16.343 21.771 98.596 1.00 49.04 N
ATOM 17 C5 G B1871 -17.014 22.766 97.921 1.00 49.33 C
ATOM 18 C6 G B1871 -17.648 22.684 96.667 1.00 49.26 C
ATOM 19 O6 G B1871 -17.736 21.717 95.899 1.00 48.94 O
ATOM 20 N1 G B1871 -18.227 23.884 96.344 1.00 49.64 N
ATOM 21 C2 G B1871 -18.203 25.010 97.112 1.00 50.03 C
ATOM 22 N2 G B1871 -18.860 26.060 96.573 1.00 50.38 N
ATOM 23 N3 G B1871 -17.608 25.102 98.295 1.00 50.10 N
ATOM 24 C4 G B1871 -17.033 23.948 98.625 1.00 49.73 C
ATOM 25 P G B1872 -15.564 29.289 100.205 1.00 50.32 P
ATOM 26 OP1 G B1872 -15.057 30.423 101.056 1.00 50.66 O
ATOM 27 OP2 G B1872 -16.708 29.539 99.279 1.00 50.50 O
ATOM 28 O5' G B1872 -14.354 28.598 99.428 1.00 49.68 O
TER
Atoms:
C4: (-22.123,24.873,91.995)
N3: (-21.057,24.867,92.883)
OP1: (-22.512,18.331,88.349)
OP2: (-23.628,20.614,88.666)
C2: (-20.100,23.873,92.980)
C1': (-19.218,21.774,92.178)
C3': (-20.273,19.682,92.414)
O5': (-21.315,20.148,89.581)
O4': (-19.150,21.114,90.942)
C5': (-20.266,19.251,89.902)
P: (-22.387,19.800,88.465)
C4': (-19.509,19.724,91.107)
C2': (-19.600,20.744,93.239)
O2': (-18.427,20.231,93.827)
N1: (-20.226,22.836,92.085)
O4: (-22.937,25.792,92.022)
O2: (-19.174,23.917,93.770)
C6: (-21.265,22.785,91.196)
C5: (-22.185,23.745,91.118)
O3': (-20.208,18.425,93.017)
N3: (-21.057,24.867,92.883)
OP1: (-22.512,18.331,88.349)
OP2: (-23.628,20.614,88.666)
C2: (-20.100,23.873,92.980)
C1': (-19.218,21.774,92.178)
C3': (-20.273,19.682,92.414)
O5': (-21.315,20.148,89.581)
O4': (-19.150,21.114,90.942)
C5': (-20.266,19.251,89.902)
P: (-22.387,19.800,88.465)
C4': (-19.509,19.724,91.107)
C2': (-19.600,20.744,93.239)
O2': (-18.427,20.231,93.827)
N1: (-20.226,22.836,92.085)
O4: (-22.937,25.792,92.022)
O2: (-19.174,23.917,93.770)
C6: (-21.265,22.785,91.196)
C5: (-22.185,23.745,91.118)
O3': (-20.208,18.425,93.017)
OP1: (-21.504,24.539,103.413)
OP2: (-21.769,26.919,102.528)
C3': (-16.473,26.888,100.737)
C1': (-16.023,24.539,100.924)
C5': (-18.813,26.595,101.700)
O6: (-17.736,21.717,95.899)
O4': (-17.231,24.818,101.564)
C8: (-15.969,22.372,99.674)
C2: (-18.203,25.010,97.112)
C6: (-17.648,22.684,96.667)
C5: (-17.014,22.766,97.921)
C4: (-17.033,23.948,98.625)
P: (-21.070,25.621,102.491)
C4': (-17.373,26.235,101.764)
C2': (-15.341,25.878,100.571)
O2': (-14.324,26.140,101.528)
N1: (-18.227,23.884,96.344)
N2: (-18.860,26.060,96.573)
N3: (-17.608,25.102,98.295)
N7: (-16.343,21.771,98.596)
N9: (-16.320,23.694,99.754)
O5': (-19.528,25.846,102.643)
O3': (-16.019,28.134,101.208)
OP2: (-21.769,26.919,102.528)
C3': (-16.473,26.888,100.737)
C1': (-16.023,24.539,100.924)
C5': (-18.813,26.595,101.700)
O6: (-17.736,21.717,95.899)
O4': (-17.231,24.818,101.564)
C8: (-15.969,22.372,99.674)
C2: (-18.203,25.010,97.112)
C6: (-17.648,22.684,96.667)
C5: (-17.014,22.766,97.921)
C4: (-17.033,23.948,98.625)
P: (-21.070,25.621,102.491)
C4': (-17.373,26.235,101.764)
C2': (-15.341,25.878,100.571)
O2': (-14.324,26.140,101.528)
N1: (-18.227,23.884,96.344)
N2: (-18.860,26.060,96.573)
N3: (-17.608,25.102,98.295)
N7: (-16.343,21.771,98.596)
N9: (-16.320,23.694,99.754)
O5': (-19.528,25.846,102.643)
O3': (-16.019,28.134,101.208)
Image (generated by PyMOL):