Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01493:01615
Extra
PDB:
ATOM 1 O3' A A1492 110.950 165.823 58.750 1.00 49.52 O
ATOM 2 P C A1493 111.409 166.432 60.164 1.00 51.03 P
ATOM 3 OP1 C A1493 110.683 167.706 60.425 1.00 47.61 O
ATOM 4 OP2 C A1493 112.891 166.411 60.158 1.00 51.69 O
ATOM 5 O5' C A1493 110.928 165.349 61.229 1.00 51.06 O
ATOM 6 C5' C A1493 110.100 165.739 62.331 1.00 48.91 C
ATOM 7 C4' C A1493 109.226 164.590 62.778 1.00 46.72 C
ATOM 8 O4' C A1493 108.527 164.032 61.627 1.00 46.37 O
ATOM 9 C3' C A1493 109.906 163.408 63.464 1.00 45.04 C
ATOM 10 O3' C A1493 108.997 162.919 64.441 1.00 46.08 O
ATOM 11 C2' C A1493 109.974 162.367 62.351 1.00 44.27 C
ATOM 12 O2' C A1493 109.969 161.062 62.884 1.00 45.37 O
ATOM 13 C1' C A1493 108.647 162.628 61.645 1.00 41.15 C
ATOM 14 N1 C A1493 108.445 162.120 60.275 1.00 37.14 N
ATOM 15 C2 C A1493 107.176 162.264 59.698 1.00 37.14 C
ATOM 16 O2 C A1493 106.274 162.814 60.354 1.00 39.17 O
ATOM 17 N3 C A1493 106.962 161.805 58.444 1.00 35.27 N
ATOM 18 C4 C A1493 107.955 161.225 57.768 1.00 34.78 C
ATOM 19 N4 C A1493 107.698 160.794 56.533 1.00 32.61 N
ATOM 20 C5 C A1493 109.255 161.064 58.330 1.00 33.60 C
ATOM 21 C6 C A1493 109.453 161.521 59.573 1.00 35.65 C
ATOM 22 P G A1494 109.305 163.116 65.999 1.00 46.24 P
ATOM 23 OP1 G A1494 108.042 163.606 66.628 1.00 45.24 O
ATOM 24 OP2 G A1494 110.556 163.900 66.154 1.00 48.66 O
ATOM 25 O5' G A1494 109.580 161.634 66.513 1.00 45.83 O
TER
ATOM 1 O3' A B1614 108.943 156.616 56.041 1.00 47.70 O
ATOM 2 P A B1615 109.653 157.592 54.996 1.00 46.96 P
ATOM 3 OP1 A B1615 110.982 156.995 54.690 1.00 45.19 O
ATOM 4 OP2 A B1615 109.569 158.983 55.502 1.00 45.48 O
ATOM 5 O5' A B1615 108.721 157.469 53.716 1.00 44.34 O
ATOM 6 C5' A B1615 108.495 156.189 53.118 1.00 44.05 C
ATOM 7 C4' A B1615 107.199 156.193 52.355 1.00 43.81 C
ATOM 8 O4' A B1615 106.101 156.456 53.261 1.00 43.22 O
ATOM 9 C3' A B1615 107.074 157.273 51.303 1.00 43.62 C
ATOM 10 O3' A B1615 107.733 156.864 50.118 1.00 45.09 O
ATOM 11 C2' A B1615 105.567 157.380 51.145 1.00 42.80 C
ATOM 12 O2' A B1615 105.040 156.308 50.390 1.00 45.43 O
ATOM 13 C1' A B1615 105.111 157.215 52.595 1.00 41.09 C
ATOM 14 N9 A B1615 104.961 158.474 53.316 1.00 40.03 N
ATOM 15 C8 A B1615 105.854 159.086 54.164 1.00 38.65 C
ATOM 16 N7 A B1615 105.406 160.203 54.684 1.00 38.70 N
ATOM 17 C5 A B1615 104.137 160.337 54.140 1.00 38.08 C
ATOM 18 C6 A B1615 103.133 161.302 54.308 1.00 38.97 C
ATOM 19 N6 A B1615 103.242 162.360 55.118 1.00 39.43 N
ATOM 20 N1 A B1615 101.986 161.139 53.610 1.00 40.33 N
ATOM 21 C2 A B1615 101.866 160.070 52.813 1.00 39.32 C
ATOM 22 N3 A B1615 102.732 159.091 52.583 1.00 37.10 N
ATOM 23 C4 A B1615 103.858 159.285 53.286 1.00 38.26 C
ATOM 24 P A B1616 108.428 157.956 49.177 1.00 42.96 P
ATOM 25 OP1 A B1616 109.297 157.223 48.217 1.00 42.51 O
ATOM 26 OP2 A B1616 109.007 159.024 50.037 1.00 43.12 O
ATOM 27 O5' A B1616 107.205 158.567 48.369 1.00 41.59 O
TER
ATOM 2 P C A1493 111.409 166.432 60.164 1.00 51.03 P
ATOM 3 OP1 C A1493 110.683 167.706 60.425 1.00 47.61 O
ATOM 4 OP2 C A1493 112.891 166.411 60.158 1.00 51.69 O
ATOM 5 O5' C A1493 110.928 165.349 61.229 1.00 51.06 O
ATOM 6 C5' C A1493 110.100 165.739 62.331 1.00 48.91 C
ATOM 7 C4' C A1493 109.226 164.590 62.778 1.00 46.72 C
ATOM 8 O4' C A1493 108.527 164.032 61.627 1.00 46.37 O
ATOM 9 C3' C A1493 109.906 163.408 63.464 1.00 45.04 C
ATOM 10 O3' C A1493 108.997 162.919 64.441 1.00 46.08 O
ATOM 11 C2' C A1493 109.974 162.367 62.351 1.00 44.27 C
ATOM 12 O2' C A1493 109.969 161.062 62.884 1.00 45.37 O
ATOM 13 C1' C A1493 108.647 162.628 61.645 1.00 41.15 C
ATOM 14 N1 C A1493 108.445 162.120 60.275 1.00 37.14 N
ATOM 15 C2 C A1493 107.176 162.264 59.698 1.00 37.14 C
ATOM 16 O2 C A1493 106.274 162.814 60.354 1.00 39.17 O
ATOM 17 N3 C A1493 106.962 161.805 58.444 1.00 35.27 N
ATOM 18 C4 C A1493 107.955 161.225 57.768 1.00 34.78 C
ATOM 19 N4 C A1493 107.698 160.794 56.533 1.00 32.61 N
ATOM 20 C5 C A1493 109.255 161.064 58.330 1.00 33.60 C
ATOM 21 C6 C A1493 109.453 161.521 59.573 1.00 35.65 C
ATOM 22 P G A1494 109.305 163.116 65.999 1.00 46.24 P
ATOM 23 OP1 G A1494 108.042 163.606 66.628 1.00 45.24 O
ATOM 24 OP2 G A1494 110.556 163.900 66.154 1.00 48.66 O
ATOM 25 O5' G A1494 109.580 161.634 66.513 1.00 45.83 O
TER
ATOM 1 O3' A B1614 108.943 156.616 56.041 1.00 47.70 O
ATOM 2 P A B1615 109.653 157.592 54.996 1.00 46.96 P
ATOM 3 OP1 A B1615 110.982 156.995 54.690 1.00 45.19 O
ATOM 4 OP2 A B1615 109.569 158.983 55.502 1.00 45.48 O
ATOM 5 O5' A B1615 108.721 157.469 53.716 1.00 44.34 O
ATOM 6 C5' A B1615 108.495 156.189 53.118 1.00 44.05 C
ATOM 7 C4' A B1615 107.199 156.193 52.355 1.00 43.81 C
ATOM 8 O4' A B1615 106.101 156.456 53.261 1.00 43.22 O
ATOM 9 C3' A B1615 107.074 157.273 51.303 1.00 43.62 C
ATOM 10 O3' A B1615 107.733 156.864 50.118 1.00 45.09 O
ATOM 11 C2' A B1615 105.567 157.380 51.145 1.00 42.80 C
ATOM 12 O2' A B1615 105.040 156.308 50.390 1.00 45.43 O
ATOM 13 C1' A B1615 105.111 157.215 52.595 1.00 41.09 C
ATOM 14 N9 A B1615 104.961 158.474 53.316 1.00 40.03 N
ATOM 15 C8 A B1615 105.854 159.086 54.164 1.00 38.65 C
ATOM 16 N7 A B1615 105.406 160.203 54.684 1.00 38.70 N
ATOM 17 C5 A B1615 104.137 160.337 54.140 1.00 38.08 C
ATOM 18 C6 A B1615 103.133 161.302 54.308 1.00 38.97 C
ATOM 19 N6 A B1615 103.242 162.360 55.118 1.00 39.43 N
ATOM 20 N1 A B1615 101.986 161.139 53.610 1.00 40.33 N
ATOM 21 C2 A B1615 101.866 160.070 52.813 1.00 39.32 C
ATOM 22 N3 A B1615 102.732 159.091 52.583 1.00 37.10 N
ATOM 23 C4 A B1615 103.858 159.285 53.286 1.00 38.26 C
ATOM 24 P A B1616 108.428 157.956 49.177 1.00 42.96 P
ATOM 25 OP1 A B1616 109.297 157.223 48.217 1.00 42.51 O
ATOM 26 OP2 A B1616 109.007 159.024 50.037 1.00 43.12 O
ATOM 27 O5' A B1616 107.205 158.567 48.369 1.00 41.59 O
TER
Atoms:
C2: (107.176,162.264,59.698)
OP1: (110.683,167.706,60.425)
OP2: (112.891,166.411,60.158)
C4: (107.955,161.225,57.768)
O5': (110.928,165.349,61.229)
C3': (109.906,163.408,63.464)
C1': (108.647,162.628,61.645)
O4': (108.527,164.032,61.627)
C5': (110.100,165.739,62.331)
P: (111.409,166.432,60.164)
O2: (106.274,162.814,60.354)
C4': (109.226,164.590,62.778)
C2': (109.974,162.367,62.351)
O2': (109.969,161.062,62.884)
N1: (108.445,162.120,60.275)
N3: (106.962,161.805,58.444)
N4: (107.698,160.794,56.533)
C6: (109.453,161.521,59.573)
C5: (109.255,161.064,58.330)
O3': (108.997,162.919,64.441)
OP1: (110.683,167.706,60.425)
OP2: (112.891,166.411,60.158)
C4: (107.955,161.225,57.768)
O5': (110.928,165.349,61.229)
C3': (109.906,163.408,63.464)
C1': (108.647,162.628,61.645)
O4': (108.527,164.032,61.627)
C5': (110.100,165.739,62.331)
P: (111.409,166.432,60.164)
O2: (106.274,162.814,60.354)
C4': (109.226,164.590,62.778)
C2': (109.974,162.367,62.351)
O2': (109.969,161.062,62.884)
N1: (108.445,162.120,60.275)
N3: (106.962,161.805,58.444)
N4: (107.698,160.794,56.533)
C6: (109.453,161.521,59.573)
C5: (109.255,161.064,58.330)
O3': (108.997,162.919,64.441)
OP1: (110.982,156.995,54.690)
OP2: (109.569,158.983,55.502)
C3': (107.074,157.273,51.303)
C1': (105.111,157.215,52.595)
C5': (108.495,156.189,53.118)
O4': (106.101,156.456,53.261)
C8: (105.854,159.086,54.164)
O2': (105.040,156.308,50.390)
C6: (103.133,161.302,54.308)
C5: (104.137,160.337,54.140)
C4: (103.858,159.285,53.286)
P: (109.653,157.592,54.996)
C4': (107.199,156.193,52.355)
C2': (105.567,157.380,51.145)
C2: (101.866,160.070,52.813)
N1: (101.986,161.139,53.610)
N3: (102.732,159.091,52.583)
N6: (103.242,162.360,55.118)
N7: (105.406,160.203,54.684)
N9: (104.961,158.474,53.316)
O5': (108.721,157.469,53.716)
O3': (107.733,156.864,50.118)
OP2: (109.569,158.983,55.502)
C3': (107.074,157.273,51.303)
C1': (105.111,157.215,52.595)
C5': (108.495,156.189,53.118)
O4': (106.101,156.456,53.261)
C8: (105.854,159.086,54.164)
O2': (105.040,156.308,50.390)
C6: (103.133,161.302,54.308)
C5: (104.137,160.337,54.140)
C4: (103.858,159.285,53.286)
P: (109.653,157.592,54.996)
C4': (107.199,156.193,52.355)
C2': (105.567,157.380,51.145)
C2: (101.866,160.070,52.813)
N1: (101.986,161.139,53.610)
N3: (102.732,159.091,52.583)
N6: (103.242,162.360,55.118)
N7: (105.406,160.203,54.684)
N9: (104.961,158.474,53.316)
O5': (108.721,157.469,53.716)
O3': (107.733,156.864,50.118)
Image (generated by PyMOL):