Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:A21:A47
Extra
PDB:
ATOM 1 O3' A A 20 -6.213 -8.812 -25.470 1.00 36.49 O
ATOM 2 P A A 21 -4.869 -9.260 -24.711 1.00 38.46 P
ATOM 3 OP1 A A 21 -4.923 -10.739 -24.558 1.00 41.17 O
ATOM 4 OP2 A A 21 -4.708 -8.417 -23.503 1.00 37.96 O
ATOM 5 O5' A A 21 -3.695 -8.869 -25.725 1.00 38.22 O
ATOM 6 C5' A A 21 -3.238 -9.777 -26.733 1.00 39.78 C
ATOM 7 C4' A A 21 -1.784 -9.516 -27.109 1.00 40.30 C
ATOM 8 O4' A A 21 -1.593 -8.119 -27.458 1.00 37.60 O
ATOM 9 C3' A A 21 -0.750 -9.824 -26.025 1.00 42.57 C
ATOM 10 O3' A A 21 0.372 -10.537 -26.580 1.00 45.12 O
ATOM 11 C2' A A 21 -0.364 -8.427 -25.528 1.00 41.03 C
ATOM 12 O2' A A 21 0.933 -8.345 -24.966 1.00 42.16 O
ATOM 13 C1' A A 21 -0.431 -7.634 -26.821 1.00 38.20 C
ATOM 14 N9 A A 21 -0.564 -6.194 -26.608 1.00 35.80 N
ATOM 15 C8 A A 21 -1.728 -5.506 -26.406 1.00 33.77 C
ATOM 16 N7 A A 21 -1.561 -4.216 -26.238 1.00 32.41 N
ATOM 17 C5 A A 21 -0.191 -4.039 -26.331 1.00 33.30 C
ATOM 18 C6 A A 21 0.630 -2.891 -26.241 1.00 32.54 C
ATOM 19 N6 A A 21 0.152 -1.662 -26.022 1.00 31.24 N
ATOM 20 N1 A A 21 1.964 -3.055 -26.384 1.00 33.88 N
ATOM 21 C2 A A 21 2.441 -4.291 -26.608 1.00 35.04 C
ATOM 22 N3 A A 21 1.770 -5.444 -26.713 1.00 35.91 N
ATOM 23 C4 A A 21 0.444 -5.251 -26.562 1.00 34.98 C
ATOM 24 P U A 22 0.275 -12.069 -27.055 1.00 48.24 P
ATOM 25 OP1 U A 22 -0.858 -12.716 -26.351 1.00 48.77 O
ATOM 26 OP2 U A 22 1.630 -12.650 -26.937 1.00 50.49 O
ATOM 27 O5' U A 22 -0.092 -11.927 -28.605 1.00 47.25 O
TER
ATOM 1 O3' C B 46 7.180 4.594 -27.917 1.00 33.00 O
ATOM 2 P C B 47 6.781 4.061 -26.459 1.00 34.62 P
ATOM 3 OP1 C B 47 6.930 5.209 -25.537 1.00 35.64 O
ATOM 4 OP2 C B 47 7.501 2.794 -26.202 1.00 35.28 O
ATOM 5 O5' C B 47 5.225 3.688 -26.596 1.00 33.78 O
ATOM 6 C5' C B 47 4.291 4.644 -27.098 1.00 33.55 C
ATOM 7 C4' C B 47 3.026 3.977 -27.613 1.00 32.08 C
ATOM 8 O4' C B 47 3.355 2.860 -28.485 1.00 31.42 O
ATOM 9 C3' C B 47 2.096 3.425 -26.533 1.00 32.56 C
ATOM 10 O3' C B 47 0.742 3.777 -26.832 1.00 31.59 O
ATOM 11 C2' C B 47 2.318 1.916 -26.629 1.00 32.53 C
ATOM 12 O2' C B 47 1.200 1.156 -26.203 1.00 33.15 O
ATOM 13 C1' C B 47 2.542 1.763 -28.129 1.00 31.28 C
ATOM 14 N1 C B 47 3.187 0.466 -28.518 1.00 31.18 N
ATOM 15 C2 C B 47 2.387 -0.578 -29.011 1.00 30.52 C
ATOM 16 O2 C B 47 1.166 -0.414 -29.132 1.00 29.82 O
ATOM 17 N3 C B 47 2.977 -1.751 -29.353 1.00 30.64 N
ATOM 18 C4 C B 47 4.297 -1.906 -29.214 1.00 31.39 C
ATOM 19 N4 C B 47 4.821 -3.082 -29.566 1.00 31.09 N
ATOM 20 C5 C B 47 5.130 -0.861 -28.711 1.00 31.70 C
ATOM 21 C6 C B 47 4.538 0.294 -28.377 1.00 31.66 C
ATOM 22 P U B 48 0.029 5.047 -26.157 1.00 32.49 P
ATOM 23 OP1 U B 48 -1.234 5.268 -26.897 1.00 31.53 O
ATOM 24 OP2 U B 48 1.012 6.156 -26.061 1.00 33.23 O
ATOM 25 O5' U B 48 -0.285 4.547 -24.660 1.00 32.88 O
TER
ATOM 2 P A A 21 -4.869 -9.260 -24.711 1.00 38.46 P
ATOM 3 OP1 A A 21 -4.923 -10.739 -24.558 1.00 41.17 O
ATOM 4 OP2 A A 21 -4.708 -8.417 -23.503 1.00 37.96 O
ATOM 5 O5' A A 21 -3.695 -8.869 -25.725 1.00 38.22 O
ATOM 6 C5' A A 21 -3.238 -9.777 -26.733 1.00 39.78 C
ATOM 7 C4' A A 21 -1.784 -9.516 -27.109 1.00 40.30 C
ATOM 8 O4' A A 21 -1.593 -8.119 -27.458 1.00 37.60 O
ATOM 9 C3' A A 21 -0.750 -9.824 -26.025 1.00 42.57 C
ATOM 10 O3' A A 21 0.372 -10.537 -26.580 1.00 45.12 O
ATOM 11 C2' A A 21 -0.364 -8.427 -25.528 1.00 41.03 C
ATOM 12 O2' A A 21 0.933 -8.345 -24.966 1.00 42.16 O
ATOM 13 C1' A A 21 -0.431 -7.634 -26.821 1.00 38.20 C
ATOM 14 N9 A A 21 -0.564 -6.194 -26.608 1.00 35.80 N
ATOM 15 C8 A A 21 -1.728 -5.506 -26.406 1.00 33.77 C
ATOM 16 N7 A A 21 -1.561 -4.216 -26.238 1.00 32.41 N
ATOM 17 C5 A A 21 -0.191 -4.039 -26.331 1.00 33.30 C
ATOM 18 C6 A A 21 0.630 -2.891 -26.241 1.00 32.54 C
ATOM 19 N6 A A 21 0.152 -1.662 -26.022 1.00 31.24 N
ATOM 20 N1 A A 21 1.964 -3.055 -26.384 1.00 33.88 N
ATOM 21 C2 A A 21 2.441 -4.291 -26.608 1.00 35.04 C
ATOM 22 N3 A A 21 1.770 -5.444 -26.713 1.00 35.91 N
ATOM 23 C4 A A 21 0.444 -5.251 -26.562 1.00 34.98 C
ATOM 24 P U A 22 0.275 -12.069 -27.055 1.00 48.24 P
ATOM 25 OP1 U A 22 -0.858 -12.716 -26.351 1.00 48.77 O
ATOM 26 OP2 U A 22 1.630 -12.650 -26.937 1.00 50.49 O
ATOM 27 O5' U A 22 -0.092 -11.927 -28.605 1.00 47.25 O
TER
ATOM 1 O3' C B 46 7.180 4.594 -27.917 1.00 33.00 O
ATOM 2 P C B 47 6.781 4.061 -26.459 1.00 34.62 P
ATOM 3 OP1 C B 47 6.930 5.209 -25.537 1.00 35.64 O
ATOM 4 OP2 C B 47 7.501 2.794 -26.202 1.00 35.28 O
ATOM 5 O5' C B 47 5.225 3.688 -26.596 1.00 33.78 O
ATOM 6 C5' C B 47 4.291 4.644 -27.098 1.00 33.55 C
ATOM 7 C4' C B 47 3.026 3.977 -27.613 1.00 32.08 C
ATOM 8 O4' C B 47 3.355 2.860 -28.485 1.00 31.42 O
ATOM 9 C3' C B 47 2.096 3.425 -26.533 1.00 32.56 C
ATOM 10 O3' C B 47 0.742 3.777 -26.832 1.00 31.59 O
ATOM 11 C2' C B 47 2.318 1.916 -26.629 1.00 32.53 C
ATOM 12 O2' C B 47 1.200 1.156 -26.203 1.00 33.15 O
ATOM 13 C1' C B 47 2.542 1.763 -28.129 1.00 31.28 C
ATOM 14 N1 C B 47 3.187 0.466 -28.518 1.00 31.18 N
ATOM 15 C2 C B 47 2.387 -0.578 -29.011 1.00 30.52 C
ATOM 16 O2 C B 47 1.166 -0.414 -29.132 1.00 29.82 O
ATOM 17 N3 C B 47 2.977 -1.751 -29.353 1.00 30.64 N
ATOM 18 C4 C B 47 4.297 -1.906 -29.214 1.00 31.39 C
ATOM 19 N4 C B 47 4.821 -3.082 -29.566 1.00 31.09 N
ATOM 20 C5 C B 47 5.130 -0.861 -28.711 1.00 31.70 C
ATOM 21 C6 C B 47 4.538 0.294 -28.377 1.00 31.66 C
ATOM 22 P U B 48 0.029 5.047 -26.157 1.00 32.49 P
ATOM 23 OP1 U B 48 -1.234 5.268 -26.897 1.00 31.53 O
ATOM 24 OP2 U B 48 1.012 6.156 -26.061 1.00 33.23 O
ATOM 25 O5' U B 48 -0.285 4.547 -24.660 1.00 32.88 O
TER
Atoms:
OP1: (-4.923,-10.739,-24.558)
OP2: (-4.708,-8.417,-23.503)
C3': (-0.750,-9.824,-26.025)
C1': (-0.431,-7.634,-26.821)
C5': (-3.238,-9.777,-26.733)
O4': (-1.593,-8.119,-27.458)
C8: (-1.728,-5.506,-26.406)
O2': (0.933,-8.345,-24.966)
C6: (0.630,-2.891,-26.241)
C5: (-0.191,-4.039,-26.331)
C4: (0.444,-5.251,-26.562)
P: (-4.869,-9.260,-24.711)
C4': (-1.784,-9.516,-27.109)
C2': (-0.364,-8.427,-25.528)
C2: (2.441,-4.291,-26.608)
N1: (1.964,-3.055,-26.384)
N3: (1.770,-5.444,-26.713)
N6: (0.152,-1.662,-26.022)
N7: (-1.561,-4.216,-26.238)
N9: (-0.564,-6.194,-26.608)
O5': (-3.695,-8.869,-25.725)
O3': (0.372,-10.537,-26.580)
OP2: (-4.708,-8.417,-23.503)
C3': (-0.750,-9.824,-26.025)
C1': (-0.431,-7.634,-26.821)
C5': (-3.238,-9.777,-26.733)
O4': (-1.593,-8.119,-27.458)
C8: (-1.728,-5.506,-26.406)
O2': (0.933,-8.345,-24.966)
C6: (0.630,-2.891,-26.241)
C5: (-0.191,-4.039,-26.331)
C4: (0.444,-5.251,-26.562)
P: (-4.869,-9.260,-24.711)
C4': (-1.784,-9.516,-27.109)
C2': (-0.364,-8.427,-25.528)
C2: (2.441,-4.291,-26.608)
N1: (1.964,-3.055,-26.384)
N3: (1.770,-5.444,-26.713)
N6: (0.152,-1.662,-26.022)
N7: (-1.561,-4.216,-26.238)
N9: (-0.564,-6.194,-26.608)
O5': (-3.695,-8.869,-25.725)
O3': (0.372,-10.537,-26.580)
C2: (2.387,-0.578,-29.011)
OP1: (6.930,5.209,-25.537)
OP2: (7.501,2.794,-26.202)
C4: (4.297,-1.906,-29.214)
O5': (5.225,3.688,-26.596)
C3': (2.096,3.425,-26.533)
C1': (2.542,1.763,-28.129)
O4': (3.355,2.860,-28.485)
C5': (4.291,4.644,-27.098)
P: (6.781,4.061,-26.459)
O2: (1.166,-0.414,-29.132)
C4': (3.026,3.977,-27.613)
C2': (2.318,1.916,-26.629)
O2': (1.200,1.156,-26.203)
N1: (3.187,0.466,-28.518)
N3: (2.977,-1.751,-29.353)
N4: (4.821,-3.082,-29.566)
C6: (4.538,0.294,-28.377)
C5: (5.130,-0.861,-28.711)
O3': (0.742,3.777,-26.832)
OP1: (6.930,5.209,-25.537)
OP2: (7.501,2.794,-26.202)
C4: (4.297,-1.906,-29.214)
O5': (5.225,3.688,-26.596)
C3': (2.096,3.425,-26.533)
C1': (2.542,1.763,-28.129)
O4': (3.355,2.860,-28.485)
C5': (4.291,4.644,-27.098)
P: (6.781,4.061,-26.459)
O2: (1.166,-0.414,-29.132)
C4': (3.026,3.977,-27.613)
C2': (2.318,1.916,-26.629)
O2': (1.200,1.156,-26.203)
N1: (3.187,0.466,-28.518)
N3: (2.977,-1.751,-29.353)
N4: (4.821,-3.082,-29.566)
C6: (4.538,0.294,-28.377)
C5: (5.130,-0.861,-28.711)
O3': (0.742,3.777,-26.832)
Image (generated by PyMOL):