Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01493:01615
Extra
PDB:
ATOM 1 O3' A A1492 110.842 165.645 58.769 1.00 54.67 O
ATOM 2 P C A1493 111.419 166.350 60.088 1.00 53.70 P
ATOM 3 OP1 C A1493 110.752 167.666 60.268 1.00 52.36 O
ATOM 4 OP2 C A1493 112.896 166.285 59.943 1.00 54.83 O
ATOM 5 O5' C A1493 110.972 165.370 61.266 1.00 53.82 O
ATOM 6 C5' C A1493 109.954 165.760 62.208 1.00 53.80 C
ATOM 7 C4' C A1493 109.162 164.555 62.693 1.00 54.42 C
ATOM 8 O4' C A1493 108.428 163.929 61.598 1.00 53.36 O
ATOM 9 C3' C A1493 109.925 163.425 63.376 1.00 53.22 C
ATOM 10 O3' C A1493 109.060 162.864 64.356 1.00 52.57 O
ATOM 11 C2' C A1493 110.062 162.402 62.259 1.00 52.82 C
ATOM 12 O2' C A1493 110.225 161.096 62.766 1.00 54.53 O
ATOM 13 C1' C A1493 108.697 162.544 61.590 1.00 50.91 C
ATOM 14 N1 C A1493 108.548 162.049 60.213 1.00 48.74 N
ATOM 15 C2 C A1493 107.329 162.250 59.574 1.00 50.18 C
ATOM 16 O2 C A1493 106.424 162.848 60.180 1.00 51.18 O
ATOM 17 N3 C A1493 107.160 161.792 58.314 1.00 50.42 N
ATOM 18 C4 C A1493 108.157 161.158 57.696 1.00 48.82 C
ATOM 19 N4 C A1493 107.946 160.723 56.455 1.00 49.14 N
ATOM 20 C5 C A1493 109.410 160.944 58.323 1.00 48.52 C
ATOM 21 C6 C A1493 109.563 161.402 59.570 1.00 48.66 C
ATOM 22 P G A1494 109.394 163.043 65.906 1.00 52.86 P
ATOM 23 OP1 G A1494 108.153 163.554 66.557 1.00 50.44 O
ATOM 24 OP2 G A1494 110.662 163.825 66.010 1.00 53.93 O
ATOM 25 O5' G A1494 109.670 161.555 66.410 1.00 51.80 O
TER
ATOM 1 O3' A B1614 109.030 156.525 55.961 1.00 54.37 O
ATOM 2 P A B1615 109.747 157.467 54.904 1.00 52.57 P
ATOM 3 OP1 A B1615 111.023 156.789 54.556 1.00 52.76 O
ATOM 4 OP2 A B1615 109.765 158.846 55.436 1.00 53.32 O
ATOM 5 O5' A B1615 108.756 157.409 53.664 1.00 52.05 O
ATOM 6 C5' A B1615 108.509 156.157 53.005 1.00 50.74 C
ATOM 7 C4' A B1615 107.180 156.189 52.305 1.00 49.22 C
ATOM 8 O4' A B1615 106.143 156.502 53.265 1.00 48.86 O
ATOM 9 C3' A B1615 107.021 157.262 51.249 1.00 47.84 C
ATOM 10 O3' A B1615 107.613 156.845 50.033 1.00 48.28 O
ATOM 11 C2' A B1615 105.510 157.377 51.158 1.00 47.61 C
ATOM 12 O2' A B1615 104.938 156.293 50.459 1.00 46.82 O
ATOM 13 C1' A B1615 105.123 157.245 52.630 1.00 47.29 C
ATOM 14 N9 A B1615 104.997 158.523 53.323 1.00 47.16 N
ATOM 15 C8 A B1615 105.884 159.134 54.176 1.00 47.06 C
ATOM 16 N7 A B1615 105.447 160.269 54.666 1.00 47.26 N
ATOM 17 C5 A B1615 104.191 160.420 54.089 1.00 46.62 C
ATOM 18 C6 A B1615 103.198 161.416 54.210 1.00 46.80 C
ATOM 19 N6 A B1615 103.311 162.498 54.986 1.00 46.22 N
ATOM 20 N1 A B1615 102.066 161.258 53.495 1.00 46.96 N
ATOM 21 C2 A B1615 101.946 160.175 52.715 1.00 48.00 C
ATOM 22 N3 A B1615 102.799 159.174 52.522 1.00 46.49 N
ATOM 23 C4 A B1615 103.912 159.358 53.249 1.00 46.55 C
ATOM 24 P A B1616 108.357 157.919 49.104 1.00 47.74 P
ATOM 25 OP1 A B1616 109.228 157.160 48.168 1.00 44.83 O
ATOM 26 OP2 A B1616 108.944 158.986 49.964 1.00 46.45 O
ATOM 27 O5' A B1616 107.173 158.557 48.263 1.00 45.54 O
TER
ATOM 2 P C A1493 111.419 166.350 60.088 1.00 53.70 P
ATOM 3 OP1 C A1493 110.752 167.666 60.268 1.00 52.36 O
ATOM 4 OP2 C A1493 112.896 166.285 59.943 1.00 54.83 O
ATOM 5 O5' C A1493 110.972 165.370 61.266 1.00 53.82 O
ATOM 6 C5' C A1493 109.954 165.760 62.208 1.00 53.80 C
ATOM 7 C4' C A1493 109.162 164.555 62.693 1.00 54.42 C
ATOM 8 O4' C A1493 108.428 163.929 61.598 1.00 53.36 O
ATOM 9 C3' C A1493 109.925 163.425 63.376 1.00 53.22 C
ATOM 10 O3' C A1493 109.060 162.864 64.356 1.00 52.57 O
ATOM 11 C2' C A1493 110.062 162.402 62.259 1.00 52.82 C
ATOM 12 O2' C A1493 110.225 161.096 62.766 1.00 54.53 O
ATOM 13 C1' C A1493 108.697 162.544 61.590 1.00 50.91 C
ATOM 14 N1 C A1493 108.548 162.049 60.213 1.00 48.74 N
ATOM 15 C2 C A1493 107.329 162.250 59.574 1.00 50.18 C
ATOM 16 O2 C A1493 106.424 162.848 60.180 1.00 51.18 O
ATOM 17 N3 C A1493 107.160 161.792 58.314 1.00 50.42 N
ATOM 18 C4 C A1493 108.157 161.158 57.696 1.00 48.82 C
ATOM 19 N4 C A1493 107.946 160.723 56.455 1.00 49.14 N
ATOM 20 C5 C A1493 109.410 160.944 58.323 1.00 48.52 C
ATOM 21 C6 C A1493 109.563 161.402 59.570 1.00 48.66 C
ATOM 22 P G A1494 109.394 163.043 65.906 1.00 52.86 P
ATOM 23 OP1 G A1494 108.153 163.554 66.557 1.00 50.44 O
ATOM 24 OP2 G A1494 110.662 163.825 66.010 1.00 53.93 O
ATOM 25 O5' G A1494 109.670 161.555 66.410 1.00 51.80 O
TER
ATOM 1 O3' A B1614 109.030 156.525 55.961 1.00 54.37 O
ATOM 2 P A B1615 109.747 157.467 54.904 1.00 52.57 P
ATOM 3 OP1 A B1615 111.023 156.789 54.556 1.00 52.76 O
ATOM 4 OP2 A B1615 109.765 158.846 55.436 1.00 53.32 O
ATOM 5 O5' A B1615 108.756 157.409 53.664 1.00 52.05 O
ATOM 6 C5' A B1615 108.509 156.157 53.005 1.00 50.74 C
ATOM 7 C4' A B1615 107.180 156.189 52.305 1.00 49.22 C
ATOM 8 O4' A B1615 106.143 156.502 53.265 1.00 48.86 O
ATOM 9 C3' A B1615 107.021 157.262 51.249 1.00 47.84 C
ATOM 10 O3' A B1615 107.613 156.845 50.033 1.00 48.28 O
ATOM 11 C2' A B1615 105.510 157.377 51.158 1.00 47.61 C
ATOM 12 O2' A B1615 104.938 156.293 50.459 1.00 46.82 O
ATOM 13 C1' A B1615 105.123 157.245 52.630 1.00 47.29 C
ATOM 14 N9 A B1615 104.997 158.523 53.323 1.00 47.16 N
ATOM 15 C8 A B1615 105.884 159.134 54.176 1.00 47.06 C
ATOM 16 N7 A B1615 105.447 160.269 54.666 1.00 47.26 N
ATOM 17 C5 A B1615 104.191 160.420 54.089 1.00 46.62 C
ATOM 18 C6 A B1615 103.198 161.416 54.210 1.00 46.80 C
ATOM 19 N6 A B1615 103.311 162.498 54.986 1.00 46.22 N
ATOM 20 N1 A B1615 102.066 161.258 53.495 1.00 46.96 N
ATOM 21 C2 A B1615 101.946 160.175 52.715 1.00 48.00 C
ATOM 22 N3 A B1615 102.799 159.174 52.522 1.00 46.49 N
ATOM 23 C4 A B1615 103.912 159.358 53.249 1.00 46.55 C
ATOM 24 P A B1616 108.357 157.919 49.104 1.00 47.74 P
ATOM 25 OP1 A B1616 109.228 157.160 48.168 1.00 44.83 O
ATOM 26 OP2 A B1616 108.944 158.986 49.964 1.00 46.45 O
ATOM 27 O5' A B1616 107.173 158.557 48.263 1.00 45.54 O
TER
Atoms:
C2: (107.329,162.250,59.574)
OP1: (110.752,167.666,60.268)
OP2: (112.896,166.285,59.943)
C4: (108.157,161.158,57.696)
O5': (110.972,165.370,61.266)
C3': (109.925,163.425,63.376)
C1': (108.697,162.544,61.590)
O4': (108.428,163.929,61.598)
C5': (109.954,165.760,62.208)
P: (111.419,166.350,60.088)
O2: (106.424,162.848,60.180)
C4': (109.162,164.555,62.693)
C2': (110.062,162.402,62.259)
O2': (110.225,161.096,62.766)
N1: (108.548,162.049,60.213)
N3: (107.160,161.792,58.314)
N4: (107.946,160.723,56.455)
C6: (109.563,161.402,59.570)
C5: (109.410,160.944,58.323)
O3': (109.060,162.864,64.356)
OP1: (110.752,167.666,60.268)
OP2: (112.896,166.285,59.943)
C4: (108.157,161.158,57.696)
O5': (110.972,165.370,61.266)
C3': (109.925,163.425,63.376)
C1': (108.697,162.544,61.590)
O4': (108.428,163.929,61.598)
C5': (109.954,165.760,62.208)
P: (111.419,166.350,60.088)
O2: (106.424,162.848,60.180)
C4': (109.162,164.555,62.693)
C2': (110.062,162.402,62.259)
O2': (110.225,161.096,62.766)
N1: (108.548,162.049,60.213)
N3: (107.160,161.792,58.314)
N4: (107.946,160.723,56.455)
C6: (109.563,161.402,59.570)
C5: (109.410,160.944,58.323)
O3': (109.060,162.864,64.356)
OP1: (111.023,156.789,54.556)
OP2: (109.765,158.846,55.436)
C3': (107.021,157.262,51.249)
C1': (105.123,157.245,52.630)
C5': (108.509,156.157,53.005)
O4': (106.143,156.502,53.265)
C8: (105.884,159.134,54.176)
O2': (104.938,156.293,50.459)
C6: (103.198,161.416,54.210)
C5: (104.191,160.420,54.089)
C4: (103.912,159.358,53.249)
P: (109.747,157.467,54.904)
C4': (107.180,156.189,52.305)
C2': (105.510,157.377,51.158)
C2: (101.946,160.175,52.715)
N1: (102.066,161.258,53.495)
N3: (102.799,159.174,52.522)
N6: (103.311,162.498,54.986)
N7: (105.447,160.269,54.666)
N9: (104.997,158.523,53.323)
O5': (108.756,157.409,53.664)
O3': (107.613,156.845,50.033)
OP2: (109.765,158.846,55.436)
C3': (107.021,157.262,51.249)
C1': (105.123,157.245,52.630)
C5': (108.509,156.157,53.005)
O4': (106.143,156.502,53.265)
C8: (105.884,159.134,54.176)
O2': (104.938,156.293,50.459)
C6: (103.198,161.416,54.210)
C5: (104.191,160.420,54.089)
C4: (103.912,159.358,53.249)
P: (109.747,157.467,54.904)
C4': (107.180,156.189,52.305)
C2': (105.510,157.377,51.158)
C2: (101.946,160.175,52.715)
N1: (102.066,161.258,53.495)
N3: (102.799,159.174,52.522)
N6: (103.311,162.498,54.986)
N7: (105.447,160.269,54.666)
N9: (104.997,158.523,53.323)
O5': (108.756,157.409,53.664)
O3': (107.613,156.845,50.033)
Image (generated by PyMOL):