Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2558:A2603
Extra
PDB:
ATOM 1 O3' C A2557 -4.523 74.015 185.087 1.00 0.79 O
ATOM 2 P C A2558 -2.997 74.292 184.718 1.00 11.50 P
ATOM 3 OP1 C A2558 -2.185 73.875 185.890 1.00 62.68 O
ATOM 4 OP2 C A2558 -2.867 75.669 184.193 1.00 62.68 O
ATOM 5 O5' C A2558 -2.719 73.269 183.533 1.00 10.68 O
ATOM 6 C5' C A2558 -1.433 73.237 182.933 1.00 10.68 C
ATOM 7 C4' C A2558 -1.381 72.239 181.808 1.00 10.68 C
ATOM 8 O4' C A2558 -2.491 72.429 180.895 1.00 10.68 O
ATOM 9 C3' C A2558 -0.118 72.443 180.991 1.00 10.68 C
ATOM 10 O3' C A2558 0.284 71.186 180.471 1.00 10.68 O
ATOM 11 C2' C A2558 -0.593 73.357 179.869 1.00 10.68 C
ATOM 12 O2' C A2558 0.215 73.253 178.721 1.00 10.68 O
ATOM 13 C1' C A2558 -2.000 72.821 179.627 1.00 10.68 C
ATOM 14 N1 C A2558 -2.948 73.774 179.024 1.00 20.51 N
ATOM 15 C2 C A2558 -3.794 74.521 179.858 1.00 20.51 C
ATOM 16 O2 C A2558 -3.685 74.405 181.088 1.00 20.51 O
ATOM 17 N3 C A2558 -4.706 75.346 179.310 1.00 20.51 N
ATOM 18 C4 C A2558 -4.794 75.450 177.997 1.00 20.51 C
ATOM 19 N4 C A2558 -5.727 76.257 177.512 1.00 20.51 N
ATOM 20 C5 C A2558 -3.930 74.727 177.122 1.00 20.51 C
ATOM 21 C6 C A2558 -3.027 73.912 177.672 1.00 20.51 C
ATOM 22 P U A2559 1.823 70.729 180.553 1.00 33.28 P
ATOM 23 OP1 U A2559 2.310 71.023 181.922 1.00 22.89 O
ATOM 24 OP2 U A2559 2.556 71.275 179.369 1.00 22.89 O
ATOM 25 O5' U A2559 1.696 69.150 180.401 1.00 13.65 O
TER
ATOM 1 O3' C B2602 -6.763 82.407 176.352 1.00 3.37 O
ATOM 2 P A B2603 -8.172 81.747 175.963 1.00 10.88 P
ATOM 3 OP1 A B2603 -9.270 82.760 175.979 1.00 16.15 O
ATOM 4 OP2 A B2603 -8.322 80.509 176.753 1.00 16.15 O
ATOM 5 O5' A B2603 -7.954 81.285 174.468 1.00 7.56 O
ATOM 6 C5' A B2603 -8.972 80.555 173.828 1.00 7.56 C
ATOM 7 C4' A B2603 -8.753 80.530 172.348 1.00 7.56 C
ATOM 8 O4' A B2603 -7.460 79.944 172.056 1.00 7.56 O
ATOM 9 C3' A B2603 -9.791 79.643 171.701 1.00 7.56 C
ATOM 10 O3' A B2603 -10.226 80.149 170.454 1.00 7.56 O
ATOM 11 C2' A B2603 -9.108 78.282 171.628 1.00 7.56 C
ATOM 12 O2' A B2603 -9.468 77.526 170.499 1.00 7.56 O
ATOM 13 C1' A B2603 -7.624 78.619 171.599 1.00 7.56 C
ATOM 14 N9 A B2603 -6.910 77.731 172.520 1.00 33.26 N
ATOM 15 C8 A B2603 -6.962 77.712 173.895 1.00 33.26 C
ATOM 16 N7 A B2603 -6.176 76.816 174.441 1.00 33.26 N
ATOM 17 C5 A B2603 -5.567 76.203 173.357 1.00 33.26 C
ATOM 18 C6 A B2603 -4.602 75.186 173.262 1.00 33.26 C
ATOM 19 N6 A B2603 -4.038 74.586 174.307 1.00 33.26 N
ATOM 20 N1 A B2603 -4.220 74.804 172.031 1.00 33.26 N
ATOM 21 C2 A B2603 -4.767 75.412 170.971 1.00 33.26 C
ATOM 22 N3 A B2603 -5.663 76.384 170.931 1.00 33.26 N
ATOM 23 C4 A B2603 -6.026 76.742 172.170 1.00 33.26 C
ATOM 24 P U B2604 -11.449 79.430 169.700 1.00 37.17 P
ATOM 25 OP1 U B2604 -12.205 80.474 168.968 1.00 55.68 O
ATOM 26 OP2 U B2604 -12.164 78.554 170.674 1.00 55.68 O
ATOM 27 O5' U B2604 -10.661 78.523 168.653 1.00 19.06 O
TER
ATOM 2 P C A2558 -2.997 74.292 184.718 1.00 11.50 P
ATOM 3 OP1 C A2558 -2.185 73.875 185.890 1.00 62.68 O
ATOM 4 OP2 C A2558 -2.867 75.669 184.193 1.00 62.68 O
ATOM 5 O5' C A2558 -2.719 73.269 183.533 1.00 10.68 O
ATOM 6 C5' C A2558 -1.433 73.237 182.933 1.00 10.68 C
ATOM 7 C4' C A2558 -1.381 72.239 181.808 1.00 10.68 C
ATOM 8 O4' C A2558 -2.491 72.429 180.895 1.00 10.68 O
ATOM 9 C3' C A2558 -0.118 72.443 180.991 1.00 10.68 C
ATOM 10 O3' C A2558 0.284 71.186 180.471 1.00 10.68 O
ATOM 11 C2' C A2558 -0.593 73.357 179.869 1.00 10.68 C
ATOM 12 O2' C A2558 0.215 73.253 178.721 1.00 10.68 O
ATOM 13 C1' C A2558 -2.000 72.821 179.627 1.00 10.68 C
ATOM 14 N1 C A2558 -2.948 73.774 179.024 1.00 20.51 N
ATOM 15 C2 C A2558 -3.794 74.521 179.858 1.00 20.51 C
ATOM 16 O2 C A2558 -3.685 74.405 181.088 1.00 20.51 O
ATOM 17 N3 C A2558 -4.706 75.346 179.310 1.00 20.51 N
ATOM 18 C4 C A2558 -4.794 75.450 177.997 1.00 20.51 C
ATOM 19 N4 C A2558 -5.727 76.257 177.512 1.00 20.51 N
ATOM 20 C5 C A2558 -3.930 74.727 177.122 1.00 20.51 C
ATOM 21 C6 C A2558 -3.027 73.912 177.672 1.00 20.51 C
ATOM 22 P U A2559 1.823 70.729 180.553 1.00 33.28 P
ATOM 23 OP1 U A2559 2.310 71.023 181.922 1.00 22.89 O
ATOM 24 OP2 U A2559 2.556 71.275 179.369 1.00 22.89 O
ATOM 25 O5' U A2559 1.696 69.150 180.401 1.00 13.65 O
TER
ATOM 1 O3' C B2602 -6.763 82.407 176.352 1.00 3.37 O
ATOM 2 P A B2603 -8.172 81.747 175.963 1.00 10.88 P
ATOM 3 OP1 A B2603 -9.270 82.760 175.979 1.00 16.15 O
ATOM 4 OP2 A B2603 -8.322 80.509 176.753 1.00 16.15 O
ATOM 5 O5' A B2603 -7.954 81.285 174.468 1.00 7.56 O
ATOM 6 C5' A B2603 -8.972 80.555 173.828 1.00 7.56 C
ATOM 7 C4' A B2603 -8.753 80.530 172.348 1.00 7.56 C
ATOM 8 O4' A B2603 -7.460 79.944 172.056 1.00 7.56 O
ATOM 9 C3' A B2603 -9.791 79.643 171.701 1.00 7.56 C
ATOM 10 O3' A B2603 -10.226 80.149 170.454 1.00 7.56 O
ATOM 11 C2' A B2603 -9.108 78.282 171.628 1.00 7.56 C
ATOM 12 O2' A B2603 -9.468 77.526 170.499 1.00 7.56 O
ATOM 13 C1' A B2603 -7.624 78.619 171.599 1.00 7.56 C
ATOM 14 N9 A B2603 -6.910 77.731 172.520 1.00 33.26 N
ATOM 15 C8 A B2603 -6.962 77.712 173.895 1.00 33.26 C
ATOM 16 N7 A B2603 -6.176 76.816 174.441 1.00 33.26 N
ATOM 17 C5 A B2603 -5.567 76.203 173.357 1.00 33.26 C
ATOM 18 C6 A B2603 -4.602 75.186 173.262 1.00 33.26 C
ATOM 19 N6 A B2603 -4.038 74.586 174.307 1.00 33.26 N
ATOM 20 N1 A B2603 -4.220 74.804 172.031 1.00 33.26 N
ATOM 21 C2 A B2603 -4.767 75.412 170.971 1.00 33.26 C
ATOM 22 N3 A B2603 -5.663 76.384 170.931 1.00 33.26 N
ATOM 23 C4 A B2603 -6.026 76.742 172.170 1.00 33.26 C
ATOM 24 P U B2604 -11.449 79.430 169.700 1.00 37.17 P
ATOM 25 OP1 U B2604 -12.205 80.474 168.968 1.00 55.68 O
ATOM 26 OP2 U B2604 -12.164 78.554 170.674 1.00 55.68 O
ATOM 27 O5' U B2604 -10.661 78.523 168.653 1.00 19.06 O
TER
Atoms:
C2: (-3.794,74.521,179.858)
OP1: (-2.185,73.875,185.890)
OP2: (-2.867,75.669,184.193)
C4: (-4.794,75.450,177.997)
O5': (-2.719,73.269,183.533)
C3': (-0.118,72.443,180.991)
C1': (-2.000,72.821,179.627)
O4': (-2.491,72.429,180.895)
C5': (-1.433,73.237,182.933)
P: (-2.997,74.292,184.718)
O2: (-3.685,74.405,181.088)
C4': (-1.381,72.239,181.808)
C2': (-0.593,73.357,179.869)
O2': (0.215,73.253,178.721)
N1: (-2.948,73.774,179.024)
N3: (-4.706,75.346,179.310)
N4: (-5.727,76.257,177.512)
C6: (-3.027,73.912,177.672)
C5: (-3.930,74.727,177.122)
O3': (0.284,71.186,180.471)
OP1: (-2.185,73.875,185.890)
OP2: (-2.867,75.669,184.193)
C4: (-4.794,75.450,177.997)
O5': (-2.719,73.269,183.533)
C3': (-0.118,72.443,180.991)
C1': (-2.000,72.821,179.627)
O4': (-2.491,72.429,180.895)
C5': (-1.433,73.237,182.933)
P: (-2.997,74.292,184.718)
O2: (-3.685,74.405,181.088)
C4': (-1.381,72.239,181.808)
C2': (-0.593,73.357,179.869)
O2': (0.215,73.253,178.721)
N1: (-2.948,73.774,179.024)
N3: (-4.706,75.346,179.310)
N4: (-5.727,76.257,177.512)
C6: (-3.027,73.912,177.672)
C5: (-3.930,74.727,177.122)
O3': (0.284,71.186,180.471)
OP1: (-9.270,82.760,175.979)
OP2: (-8.322,80.509,176.753)
C3': (-9.791,79.643,171.701)
C1': (-7.624,78.619,171.599)
C5': (-8.972,80.555,173.828)
O4': (-7.460,79.944,172.056)
C8: (-6.962,77.712,173.895)
O2': (-9.468,77.526,170.499)
C6: (-4.602,75.186,173.262)
C5: (-5.567,76.203,173.357)
C4: (-6.026,76.742,172.170)
P: (-8.172,81.747,175.963)
C4': (-8.753,80.530,172.348)
C2': (-9.108,78.282,171.628)
C2: (-4.767,75.412,170.971)
N1: (-4.220,74.804,172.031)
N3: (-5.663,76.384,170.931)
N6: (-4.038,74.586,174.307)
N7: (-6.176,76.816,174.441)
N9: (-6.910,77.731,172.520)
O5': (-7.954,81.285,174.468)
O3': (-10.226,80.149,170.454)
OP2: (-8.322,80.509,176.753)
C3': (-9.791,79.643,171.701)
C1': (-7.624,78.619,171.599)
C5': (-8.972,80.555,173.828)
O4': (-7.460,79.944,172.056)
C8: (-6.962,77.712,173.895)
O2': (-9.468,77.526,170.499)
C6: (-4.602,75.186,173.262)
C5: (-5.567,76.203,173.357)
C4: (-6.026,76.742,172.170)
P: (-8.172,81.747,175.963)
C4': (-8.753,80.530,172.348)
C2': (-9.108,78.282,171.628)
C2: (-4.767,75.412,170.971)
N1: (-4.220,74.804,172.031)
N3: (-5.663,76.384,170.931)
N6: (-4.038,74.586,174.307)
N7: (-6.176,76.816,174.441)
N9: (-6.910,77.731,172.520)
O5': (-7.954,81.285,174.468)
O3': (-10.226,80.149,170.454)
Image (generated by PyMOL):