Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B56:B25
Extra
PDB:
ATOM 1 O3' U A 55 6.910 -34.094 -7.677 1.00 64.12 O
ATOM 2 P A A 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 3 OP1 A A 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 4 OP2 A A 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 5 O5' A A 56 6.719 -31.431 -7.555 1.00 62.91 O
ATOM 6 C5' A A 56 7.284 -30.119 -7.736 1.00 61.35 C
ATOM 7 C4' A A 56 6.581 -29.060 -6.896 1.00 55.87 C
ATOM 8 O4' A A 56 5.375 -28.669 -7.577 1.00 55.89 O
ATOM 9 C3' A A 56 6.085 -29.571 -5.542 1.00 52.40 C
ATOM 10 O3' A A 56 7.092 -29.320 -4.614 1.00 52.43 O
ATOM 11 C2' A A 56 4.889 -28.682 -5.315 1.00 51.86 C
ATOM 12 O2' A A 56 5.280 -27.303 -5.337 1.00 55.86 O
ATOM 13 C1' A A 56 4.276 -28.780 -6.682 1.00 49.26 C
ATOM 14 N9 A A 56 3.392 -29.835 -7.172 1.00 48.19 N
ATOM 15 C8 A A 56 3.669 -30.834 -8.063 1.00 48.09 C
ATOM 16 N7 A A 56 2.577 -31.558 -8.323 1.00 50.01 N
ATOM 17 C5 A A 56 1.541 -30.937 -7.592 1.00 47.58 C
ATOM 18 C6 A A 56 0.153 -31.143 -7.393 1.00 46.90 C
ATOM 19 N6 A A 56 -0.553 -32.115 -7.951 1.00 45.42 N
ATOM 20 N1 A A 56 -0.541 -30.310 -6.574 1.00 40.83 N
ATOM 21 C2 A A 56 0.094 -29.349 -5.951 1.00 42.78 C
ATOM 22 N3 A A 56 1.377 -29.099 -6.049 1.00 46.23 N
ATOM 23 C4 A A 56 2.045 -29.896 -6.890 1.00 44.00 C
ATOM 24 P A A 57 7.211 -30.179 -3.260 1.00 61.57 P
ATOM 25 OP1 A A 57 8.248 -29.451 -2.464 1.00 45.84 O
ATOM 26 OP2 A A 57 7.369 -31.646 -3.580 1.00 56.26 O
ATOM 27 O5' A A 57 5.743 -29.953 -2.604 1.00 53.45 O
TER
ATOM 1 O3' G B 24 -5.126 -32.323 -12.207 1.00 60.92 O
ATOM 2 P C B 25 -5.412 -33.847 -11.787 1.00 62.34 P
ATOM 3 OP1 C B 25 -4.803 -34.768 -12.787 1.00 61.47 O
ATOM 4 OP2 C B 25 -6.855 -34.042 -11.499 1.00 62.46 O
ATOM 5 O5' C B 25 -4.521 -33.982 -10.469 1.00 56.20 O
ATOM 6 C5' C B 25 -3.093 -33.983 -10.496 1.00 52.72 C
ATOM 7 C4' C B 25 -2.573 -34.538 -9.167 1.00 54.26 C
ATOM 8 O4' C B 25 -2.755 -33.526 -8.117 1.00 52.58 O
ATOM 9 C3' C B 25 -3.290 -35.806 -8.666 1.00 53.32 C
ATOM 10 O3' C B 25 -2.659 -37.026 -9.110 1.00 53.41 O
ATOM 11 C2' C B 25 -3.099 -35.690 -7.162 1.00 50.64 C
ATOM 12 O2' C B 25 -1.780 -35.951 -6.746 1.00 47.54 O
ATOM 13 C1' C B 25 -3.275 -34.182 -6.965 1.00 54.30 C
ATOM 14 N1 C B 25 -4.688 -33.821 -6.597 1.00 54.75 N
ATOM 15 C2 C B 25 -5.025 -34.008 -5.234 1.00 50.79 C
ATOM 16 O2 C B 25 -4.137 -34.436 -4.477 1.00 45.86 O
ATOM 17 N3 C B 25 -6.275 -33.686 -4.814 1.00 50.52 N
ATOM 18 C4 C B 25 -7.163 -33.202 -5.689 1.00 54.57 C
ATOM 19 N4 C B 25 -8.390 -32.915 -5.252 1.00 52.79 N
ATOM 20 C5 C B 25 -6.833 -33.035 -7.075 1.00 58.09 C
ATOM 21 C6 C B 25 -5.599 -33.340 -7.492 1.00 52.71 C
ATOM 22 P U B 26 -3.501 -38.371 -9.326 1.00 57.56 P
ATOM 23 OP1 U B 26 -2.621 -39.318 -10.088 1.00 62.22 O
ATOM 24 OP2 U B 26 -4.849 -38.032 -9.796 1.00 55.66 O
ATOM 25 O5' U B 26 -3.678 -39.135 -7.926 1.00 56.24 O
TER
ATOM 2 P A A 56 7.539 -32.669 -8.182 1.00 72.44 P
ATOM 3 OP1 A A 56 7.236 -32.552 -9.638 1.00 64.94 O
ATOM 4 OP2 A A 56 8.897 -32.508 -7.629 1.00 62.27 O
ATOM 5 O5' A A 56 6.719 -31.431 -7.555 1.00 62.91 O
ATOM 6 C5' A A 56 7.284 -30.119 -7.736 1.00 61.35 C
ATOM 7 C4' A A 56 6.581 -29.060 -6.896 1.00 55.87 C
ATOM 8 O4' A A 56 5.375 -28.669 -7.577 1.00 55.89 O
ATOM 9 C3' A A 56 6.085 -29.571 -5.542 1.00 52.40 C
ATOM 10 O3' A A 56 7.092 -29.320 -4.614 1.00 52.43 O
ATOM 11 C2' A A 56 4.889 -28.682 -5.315 1.00 51.86 C
ATOM 12 O2' A A 56 5.280 -27.303 -5.337 1.00 55.86 O
ATOM 13 C1' A A 56 4.276 -28.780 -6.682 1.00 49.26 C
ATOM 14 N9 A A 56 3.392 -29.835 -7.172 1.00 48.19 N
ATOM 15 C8 A A 56 3.669 -30.834 -8.063 1.00 48.09 C
ATOM 16 N7 A A 56 2.577 -31.558 -8.323 1.00 50.01 N
ATOM 17 C5 A A 56 1.541 -30.937 -7.592 1.00 47.58 C
ATOM 18 C6 A A 56 0.153 -31.143 -7.393 1.00 46.90 C
ATOM 19 N6 A A 56 -0.553 -32.115 -7.951 1.00 45.42 N
ATOM 20 N1 A A 56 -0.541 -30.310 -6.574 1.00 40.83 N
ATOM 21 C2 A A 56 0.094 -29.349 -5.951 1.00 42.78 C
ATOM 22 N3 A A 56 1.377 -29.099 -6.049 1.00 46.23 N
ATOM 23 C4 A A 56 2.045 -29.896 -6.890 1.00 44.00 C
ATOM 24 P A A 57 7.211 -30.179 -3.260 1.00 61.57 P
ATOM 25 OP1 A A 57 8.248 -29.451 -2.464 1.00 45.84 O
ATOM 26 OP2 A A 57 7.369 -31.646 -3.580 1.00 56.26 O
ATOM 27 O5' A A 57 5.743 -29.953 -2.604 1.00 53.45 O
TER
ATOM 1 O3' G B 24 -5.126 -32.323 -12.207 1.00 60.92 O
ATOM 2 P C B 25 -5.412 -33.847 -11.787 1.00 62.34 P
ATOM 3 OP1 C B 25 -4.803 -34.768 -12.787 1.00 61.47 O
ATOM 4 OP2 C B 25 -6.855 -34.042 -11.499 1.00 62.46 O
ATOM 5 O5' C B 25 -4.521 -33.982 -10.469 1.00 56.20 O
ATOM 6 C5' C B 25 -3.093 -33.983 -10.496 1.00 52.72 C
ATOM 7 C4' C B 25 -2.573 -34.538 -9.167 1.00 54.26 C
ATOM 8 O4' C B 25 -2.755 -33.526 -8.117 1.00 52.58 O
ATOM 9 C3' C B 25 -3.290 -35.806 -8.666 1.00 53.32 C
ATOM 10 O3' C B 25 -2.659 -37.026 -9.110 1.00 53.41 O
ATOM 11 C2' C B 25 -3.099 -35.690 -7.162 1.00 50.64 C
ATOM 12 O2' C B 25 -1.780 -35.951 -6.746 1.00 47.54 O
ATOM 13 C1' C B 25 -3.275 -34.182 -6.965 1.00 54.30 C
ATOM 14 N1 C B 25 -4.688 -33.821 -6.597 1.00 54.75 N
ATOM 15 C2 C B 25 -5.025 -34.008 -5.234 1.00 50.79 C
ATOM 16 O2 C B 25 -4.137 -34.436 -4.477 1.00 45.86 O
ATOM 17 N3 C B 25 -6.275 -33.686 -4.814 1.00 50.52 N
ATOM 18 C4 C B 25 -7.163 -33.202 -5.689 1.00 54.57 C
ATOM 19 N4 C B 25 -8.390 -32.915 -5.252 1.00 52.79 N
ATOM 20 C5 C B 25 -6.833 -33.035 -7.075 1.00 58.09 C
ATOM 21 C6 C B 25 -5.599 -33.340 -7.492 1.00 52.71 C
ATOM 22 P U B 26 -3.501 -38.371 -9.326 1.00 57.56 P
ATOM 23 OP1 U B 26 -2.621 -39.318 -10.088 1.00 62.22 O
ATOM 24 OP2 U B 26 -4.849 -38.032 -9.796 1.00 55.66 O
ATOM 25 O5' U B 26 -3.678 -39.135 -7.926 1.00 56.24 O
TER
Atoms:
OP1: (7.236,-32.552,-9.638)
OP2: (8.897,-32.508,-7.629)
C3': (6.085,-29.571,-5.542)
C1': (4.276,-28.780,-6.682)
C5': (7.284,-30.119,-7.736)
O4': (5.375,-28.669,-7.577)
C8: (3.669,-30.834,-8.063)
O2': (5.280,-27.303,-5.337)
C6: (0.153,-31.143,-7.393)
C5: (1.541,-30.937,-7.592)
C4: (2.045,-29.896,-6.890)
P: (7.539,-32.669,-8.182)
C4': (6.581,-29.060,-6.896)
C2': (4.889,-28.682,-5.315)
C2: (0.094,-29.349,-5.951)
N1: (-0.541,-30.310,-6.574)
N3: (1.377,-29.099,-6.049)
N6: (-0.553,-32.115,-7.951)
N7: (2.577,-31.558,-8.323)
N9: (3.392,-29.835,-7.172)
O5': (6.719,-31.431,-7.555)
O3': (7.092,-29.320,-4.614)
OP2: (8.897,-32.508,-7.629)
C3': (6.085,-29.571,-5.542)
C1': (4.276,-28.780,-6.682)
C5': (7.284,-30.119,-7.736)
O4': (5.375,-28.669,-7.577)
C8: (3.669,-30.834,-8.063)
O2': (5.280,-27.303,-5.337)
C6: (0.153,-31.143,-7.393)
C5: (1.541,-30.937,-7.592)
C4: (2.045,-29.896,-6.890)
P: (7.539,-32.669,-8.182)
C4': (6.581,-29.060,-6.896)
C2': (4.889,-28.682,-5.315)
C2: (0.094,-29.349,-5.951)
N1: (-0.541,-30.310,-6.574)
N3: (1.377,-29.099,-6.049)
N6: (-0.553,-32.115,-7.951)
N7: (2.577,-31.558,-8.323)
N9: (3.392,-29.835,-7.172)
O5': (6.719,-31.431,-7.555)
O3': (7.092,-29.320,-4.614)
C2: (-5.025,-34.008,-5.234)
OP1: (-4.803,-34.768,-12.787)
OP2: (-6.855,-34.042,-11.499)
C4: (-7.163,-33.202,-5.689)
O5': (-4.521,-33.982,-10.469)
C3': (-3.290,-35.806,-8.666)
C1': (-3.275,-34.182,-6.965)
O4': (-2.755,-33.526,-8.117)
C5': (-3.093,-33.983,-10.496)
P: (-5.412,-33.847,-11.787)
O2: (-4.137,-34.436,-4.477)
C4': (-2.573,-34.538,-9.167)
C2': (-3.099,-35.690,-7.162)
O2': (-1.780,-35.951,-6.746)
N1: (-4.688,-33.821,-6.597)
N3: (-6.275,-33.686,-4.814)
N4: (-8.390,-32.915,-5.252)
C6: (-5.599,-33.340,-7.492)
C5: (-6.833,-33.035,-7.075)
O3': (-2.659,-37.026,-9.110)
OP1: (-4.803,-34.768,-12.787)
OP2: (-6.855,-34.042,-11.499)
C4: (-7.163,-33.202,-5.689)
O5': (-4.521,-33.982,-10.469)
C3': (-3.290,-35.806,-8.666)
C1': (-3.275,-34.182,-6.965)
O4': (-2.755,-33.526,-8.117)
C5': (-3.093,-33.983,-10.496)
P: (-5.412,-33.847,-11.787)
O2: (-4.137,-34.436,-4.477)
C4': (-2.573,-34.538,-9.167)
C2': (-3.099,-35.690,-7.162)
O2': (-1.780,-35.951,-6.746)
N1: (-4.688,-33.821,-6.597)
N3: (-6.275,-33.686,-4.814)
N4: (-8.390,-32.915,-5.252)
C6: (-5.599,-33.340,-7.492)
C5: (-6.833,-33.035,-7.075)
O3': (-2.659,-37.026,-9.110)
Image (generated by PyMOL):