Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2511:A2556
Extra
PDB:
ATOM 1 O3' C A2510 59.385 -71.583 41.460 1.00 34.19 O
ATOM 2 P C A2511 57.956 -71.391 40.759 1.00 33.17 P
ATOM 3 OP1 C A2511 57.082 -72.502 41.221 1.00 47.60 O
ATOM 4 OP2 C A2511 58.196 -71.231 39.304 1.00 49.98 O
ATOM 5 O5' C A2511 57.450 -70.004 41.371 1.00 37.58 O
ATOM 6 C5' C A2511 57.356 -69.817 42.774 1.00 30.70 C
ATOM 7 C4' C A2511 56.831 -68.450 43.129 1.00 30.72 C
ATOM 8 O4' C A2511 57.796 -67.433 42.741 1.00 37.81 O
ATOM 9 C3' C A2511 55.519 -68.040 42.466 1.00 27.27 C
ATOM 10 O3' C A2511 54.825 -67.157 43.350 1.00 35.39 O
ATOM 11 C2' C A2511 56.021 -67.218 41.306 1.00 29.15 C
ATOM 12 O2' C A2511 55.068 -66.360 40.742 1.00 33.82 O
ATOM 13 C1' C A2511 57.124 -66.447 42.004 1.00 33.94 C
ATOM 14 N1 C A2511 58.071 -65.771 41.094 1.00 30.36 N
ATOM 15 C2 C A2511 58.716 -66.617 40.226 1.00 34.58 C
ATOM 16 O2 C A2511 58.464 -67.822 40.359 1.00 43.22 O
ATOM 17 N3 C A2511 59.569 -66.141 39.296 1.00 31.39 N
ATOM 18 C4 C A2511 59.789 -64.852 39.238 1.00 34.96 C
ATOM 19 N4 C A2511 60.648 -64.495 38.286 1.00 30.47 N
ATOM 20 C5 C A2511 59.134 -63.936 40.138 1.00 36.15 C
ATOM 21 C6 C A2511 58.276 -64.416 41.051 1.00 26.98 C
ATOM 22 P U A2512 53.604 -67.677 44.258 1.00 43.04 P
ATOM 23 OP1 U A2512 53.766 -69.144 44.419 1.00 33.16 O
ATOM 24 OP2 U A2512 52.360 -67.168 43.637 1.00 44.92 O
ATOM 25 O5' U A2512 53.864 -66.951 45.656 1.00 34.74 O
TER
ATOM 1 O3' C B2555 61.560 -62.719 32.876 1.00 26.85 O
ATOM 2 P A B2556 63.057 -62.752 33.455 1.00 34.70 P
ATOM 3 OP1 A B2556 63.954 -62.915 32.289 1.00 25.25 O
ATOM 4 OP2 A B2556 63.110 -63.768 34.559 1.00 29.08 O
ATOM 5 O5' A B2556 63.211 -61.305 34.053 1.00 38.22 O
ATOM 6 C5' A B2556 63.016 -60.157 33.242 1.00 33.33 C
ATOM 7 C4' A B2556 63.048 -58.901 34.071 1.00 40.76 C
ATOM 8 O4' A B2556 61.945 -58.931 35.023 1.00 44.41 O
ATOM 9 C3' A B2556 64.312 -58.712 34.911 1.00 41.55 C
ATOM 10 O3' A B2556 64.524 -57.318 35.107 1.00 53.10 O
ATOM 11 C2' A B2556 63.912 -59.342 36.237 1.00 43.22 C
ATOM 12 O2' A B2556 64.676 -58.912 37.339 1.00 55.53 O
ATOM 13 C1' A B2556 62.457 -58.898 36.346 1.00 39.31 C
ATOM 14 N9 A B2556 61.629 -59.774 37.157 1.00 38.99 N
ATOM 15 C8 A B2556 61.417 -61.119 37.005 1.00 39.97 C
ATOM 16 N7 A B2556 60.588 -61.628 37.888 1.00 36.06 N
ATOM 17 C5 A B2556 60.228 -60.535 38.650 1.00 35.53 C
ATOM 18 C6 A B2556 59.369 -60.399 39.729 1.00 34.48 C
ATOM 19 N6 A B2556 58.700 -61.396 40.276 1.00 38.26 N
ATOM 20 N1 A B2556 59.238 -59.185 40.256 1.00 39.62 N
ATOM 21 C2 A B2556 59.921 -58.172 39.725 1.00 41.62 C
ATOM 22 N3 A B2556 60.760 -58.157 38.703 1.00 38.27 N
ATOM 23 C4 A B2556 60.863 -59.390 38.212 1.00 39.52 C
ATOM 24 P U B2557 65.999 -56.709 35.252 1.00 44.26 P
ATOM 25 OP1 U B2557 66.544 -56.565 33.881 1.00 64.77 O
ATOM 26 OP2 U B2557 66.731 -57.548 36.235 1.00 63.23 O
ATOM 27 O5' U B2557 65.700 -55.282 35.865 1.00 42.96 O
TER
ATOM 2 P C A2511 57.956 -71.391 40.759 1.00 33.17 P
ATOM 3 OP1 C A2511 57.082 -72.502 41.221 1.00 47.60 O
ATOM 4 OP2 C A2511 58.196 -71.231 39.304 1.00 49.98 O
ATOM 5 O5' C A2511 57.450 -70.004 41.371 1.00 37.58 O
ATOM 6 C5' C A2511 57.356 -69.817 42.774 1.00 30.70 C
ATOM 7 C4' C A2511 56.831 -68.450 43.129 1.00 30.72 C
ATOM 8 O4' C A2511 57.796 -67.433 42.741 1.00 37.81 O
ATOM 9 C3' C A2511 55.519 -68.040 42.466 1.00 27.27 C
ATOM 10 O3' C A2511 54.825 -67.157 43.350 1.00 35.39 O
ATOM 11 C2' C A2511 56.021 -67.218 41.306 1.00 29.15 C
ATOM 12 O2' C A2511 55.068 -66.360 40.742 1.00 33.82 O
ATOM 13 C1' C A2511 57.124 -66.447 42.004 1.00 33.94 C
ATOM 14 N1 C A2511 58.071 -65.771 41.094 1.00 30.36 N
ATOM 15 C2 C A2511 58.716 -66.617 40.226 1.00 34.58 C
ATOM 16 O2 C A2511 58.464 -67.822 40.359 1.00 43.22 O
ATOM 17 N3 C A2511 59.569 -66.141 39.296 1.00 31.39 N
ATOM 18 C4 C A2511 59.789 -64.852 39.238 1.00 34.96 C
ATOM 19 N4 C A2511 60.648 -64.495 38.286 1.00 30.47 N
ATOM 20 C5 C A2511 59.134 -63.936 40.138 1.00 36.15 C
ATOM 21 C6 C A2511 58.276 -64.416 41.051 1.00 26.98 C
ATOM 22 P U A2512 53.604 -67.677 44.258 1.00 43.04 P
ATOM 23 OP1 U A2512 53.766 -69.144 44.419 1.00 33.16 O
ATOM 24 OP2 U A2512 52.360 -67.168 43.637 1.00 44.92 O
ATOM 25 O5' U A2512 53.864 -66.951 45.656 1.00 34.74 O
TER
ATOM 1 O3' C B2555 61.560 -62.719 32.876 1.00 26.85 O
ATOM 2 P A B2556 63.057 -62.752 33.455 1.00 34.70 P
ATOM 3 OP1 A B2556 63.954 -62.915 32.289 1.00 25.25 O
ATOM 4 OP2 A B2556 63.110 -63.768 34.559 1.00 29.08 O
ATOM 5 O5' A B2556 63.211 -61.305 34.053 1.00 38.22 O
ATOM 6 C5' A B2556 63.016 -60.157 33.242 1.00 33.33 C
ATOM 7 C4' A B2556 63.048 -58.901 34.071 1.00 40.76 C
ATOM 8 O4' A B2556 61.945 -58.931 35.023 1.00 44.41 O
ATOM 9 C3' A B2556 64.312 -58.712 34.911 1.00 41.55 C
ATOM 10 O3' A B2556 64.524 -57.318 35.107 1.00 53.10 O
ATOM 11 C2' A B2556 63.912 -59.342 36.237 1.00 43.22 C
ATOM 12 O2' A B2556 64.676 -58.912 37.339 1.00 55.53 O
ATOM 13 C1' A B2556 62.457 -58.898 36.346 1.00 39.31 C
ATOM 14 N9 A B2556 61.629 -59.774 37.157 1.00 38.99 N
ATOM 15 C8 A B2556 61.417 -61.119 37.005 1.00 39.97 C
ATOM 16 N7 A B2556 60.588 -61.628 37.888 1.00 36.06 N
ATOM 17 C5 A B2556 60.228 -60.535 38.650 1.00 35.53 C
ATOM 18 C6 A B2556 59.369 -60.399 39.729 1.00 34.48 C
ATOM 19 N6 A B2556 58.700 -61.396 40.276 1.00 38.26 N
ATOM 20 N1 A B2556 59.238 -59.185 40.256 1.00 39.62 N
ATOM 21 C2 A B2556 59.921 -58.172 39.725 1.00 41.62 C
ATOM 22 N3 A B2556 60.760 -58.157 38.703 1.00 38.27 N
ATOM 23 C4 A B2556 60.863 -59.390 38.212 1.00 39.52 C
ATOM 24 P U B2557 65.999 -56.709 35.252 1.00 44.26 P
ATOM 25 OP1 U B2557 66.544 -56.565 33.881 1.00 64.77 O
ATOM 26 OP2 U B2557 66.731 -57.548 36.235 1.00 63.23 O
ATOM 27 O5' U B2557 65.700 -55.282 35.865 1.00 42.96 O
TER
Atoms:
C2: (58.716,-66.617,40.226)
OP1: (57.082,-72.502,41.221)
OP2: (58.196,-71.231,39.304)
C4: (59.789,-64.852,39.238)
O5': (57.450,-70.004,41.371)
C3': (55.519,-68.040,42.466)
C1': (57.124,-66.447,42.004)
O4': (57.796,-67.433,42.741)
C5': (57.356,-69.817,42.774)
P: (57.956,-71.391,40.759)
O2: (58.464,-67.822,40.359)
C4': (56.831,-68.450,43.129)
C2': (56.021,-67.218,41.306)
O2': (55.068,-66.360,40.742)
N1: (58.071,-65.771,41.094)
N3: (59.569,-66.141,39.296)
N4: (60.648,-64.495,38.286)
C6: (58.276,-64.416,41.051)
C5: (59.134,-63.936,40.138)
O3': (54.825,-67.157,43.350)
OP1: (57.082,-72.502,41.221)
OP2: (58.196,-71.231,39.304)
C4: (59.789,-64.852,39.238)
O5': (57.450,-70.004,41.371)
C3': (55.519,-68.040,42.466)
C1': (57.124,-66.447,42.004)
O4': (57.796,-67.433,42.741)
C5': (57.356,-69.817,42.774)
P: (57.956,-71.391,40.759)
O2: (58.464,-67.822,40.359)
C4': (56.831,-68.450,43.129)
C2': (56.021,-67.218,41.306)
O2': (55.068,-66.360,40.742)
N1: (58.071,-65.771,41.094)
N3: (59.569,-66.141,39.296)
N4: (60.648,-64.495,38.286)
C6: (58.276,-64.416,41.051)
C5: (59.134,-63.936,40.138)
O3': (54.825,-67.157,43.350)
OP1: (63.954,-62.915,32.289)
OP2: (63.110,-63.768,34.559)
C3': (64.312,-58.712,34.911)
C1': (62.457,-58.898,36.346)
C5': (63.016,-60.157,33.242)
O4': (61.945,-58.931,35.023)
C8: (61.417,-61.119,37.005)
O2': (64.676,-58.912,37.339)
C6: (59.369,-60.399,39.729)
C5: (60.228,-60.535,38.650)
C4: (60.863,-59.390,38.212)
P: (63.057,-62.752,33.455)
C4': (63.048,-58.901,34.071)
C2': (63.912,-59.342,36.237)
C2: (59.921,-58.172,39.725)
N1: (59.238,-59.185,40.256)
N3: (60.760,-58.157,38.703)
N6: (58.700,-61.396,40.276)
N7: (60.588,-61.628,37.888)
N9: (61.629,-59.774,37.157)
O5': (63.211,-61.305,34.053)
O3': (64.524,-57.318,35.107)
OP2: (63.110,-63.768,34.559)
C3': (64.312,-58.712,34.911)
C1': (62.457,-58.898,36.346)
C5': (63.016,-60.157,33.242)
O4': (61.945,-58.931,35.023)
C8: (61.417,-61.119,37.005)
O2': (64.676,-58.912,37.339)
C6: (59.369,-60.399,39.729)
C5: (60.228,-60.535,38.650)
C4: (60.863,-59.390,38.212)
P: (63.057,-62.752,33.455)
C4': (63.048,-58.901,34.071)
C2': (63.912,-59.342,36.237)
C2: (59.921,-58.172,39.725)
N1: (59.238,-59.185,40.256)
N3: (60.760,-58.157,38.703)
N6: (58.700,-61.396,40.276)
N7: (60.588,-61.628,37.888)
N9: (61.629,-59.774,37.157)
O5': (63.211,-61.305,34.053)
O3': (64.524,-57.318,35.107)
Image (generated by PyMOL):