Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1421:A1563
Extra
PDB:
ATOM 1 O3' A A1420 -20.569 -13.896 27.837 1.00 0.14 O
ATOM 2 P C A1421 -20.403 -13.622 26.249 1.00 4.06 P
ATOM 3 OP1 C A1421 -19.167 -14.319 25.793 1.00 4.06 O
ATOM 4 OP2 C A1421 -20.510 -12.160 26.047 1.00 4.06 O
ATOM 5 O5' C A1421 -21.684 -14.333 25.643 1.00 4.06 O
ATOM 6 C5' C A1421 -21.671 -14.878 24.332 1.00 4.06 C
ATOM 7 C4' C A1421 -22.538 -16.116 24.228 1.00 4.06 C
ATOM 8 O4' C A1421 -22.577 -16.803 25.520 1.00 4.06 O
ATOM 9 C3' C A1421 -24.003 -15.882 23.827 1.00 4.06 C
ATOM 10 O3' C A1421 -24.380 -16.869 22.868 1.00 4.06 O
ATOM 11 C2' C A1421 -24.768 -16.108 25.143 1.00 4.06 C
ATOM 12 O2' C A1421 -26.100 -16.538 24.994 1.00 4.06 O
ATOM 13 C1' C A1421 -23.913 -17.182 25.788 1.00 4.06 C
ATOM 14 N1 C A1421 -24.101 -17.356 27.248 1.00 3.82 N
ATOM 15 C2 C A1421 -23.636 -18.569 27.777 1.00 3.82 C
ATOM 16 O2 C A1421 -23.085 -19.401 27.028 1.00 3.82 O
ATOM 17 N3 C A1421 -23.781 -18.817 29.102 1.00 3.82 N
ATOM 18 C4 C A1421 -24.402 -17.935 29.889 1.00 3.82 C
ATOM 19 N4 C A1421 -24.507 -18.258 31.181 1.00 3.82 N
ATOM 20 C5 C A1421 -24.897 -16.696 29.371 1.00 3.82 C
ATOM 21 C6 C A1421 -24.733 -16.454 28.054 1.00 3.82 C
ATOM 22 P G A1422 -24.364 -16.523 21.293 1.00 0.01 P
ATOM 23 OP1 G A1422 -23.894 -17.724 20.579 1.00 0.01 O
ATOM 24 OP2 G A1422 -23.606 -15.266 21.129 1.00 0.01 O
ATOM 25 O5' G A1422 -25.907 -16.262 20.987 1.00 0.01 O
TER
ATOM 1 O3' A B1562 -28.634 -17.175 32.629 1.00 0.01 O
ATOM 2 P A B1563 -27.465 -16.434 33.378 1.00 0.01 P
ATOM 3 OP1 A B1563 -28.003 -15.172 33.870 1.00 0.01 O
ATOM 4 OP2 A B1563 -26.318 -16.407 32.472 1.00 0.01 O
ATOM 5 O5' A B1563 -27.180 -17.404 34.581 1.00 0.01 O
ATOM 6 C5' A B1563 -28.117 -17.550 35.631 1.00 0.01 C
ATOM 7 C4' A B1563 -27.962 -18.879 36.309 1.00 0.01 C
ATOM 8 O4' A B1563 -27.882 -19.901 35.308 1.00 0.01 O
ATOM 9 C3' A B1563 -26.692 -19.083 37.116 1.00 0.01 C
ATOM 10 O3' A B1563 -26.754 -18.515 38.401 1.00 0.01 O
ATOM 11 C2' A B1563 -26.567 -20.587 37.144 1.00 0.01 C
ATOM 12 O2' A B1563 -27.459 -21.143 38.099 1.00 0.01 O
ATOM 13 C1' A B1563 -27.062 -20.948 35.756 1.00 0.01 C
ATOM 14 N9 A B1563 -25.979 -21.111 34.795 1.00 0.01 N
ATOM 15 C8 A B1563 -25.609 -20.187 33.892 1.00 0.01 C
ATOM 16 N7 A B1563 -24.671 -20.619 33.115 1.00 0.01 N
ATOM 17 C5 A B1563 -24.430 -21.920 33.525 1.00 0.01 C
ATOM 18 C6 A B1563 -23.537 -22.906 33.075 1.00 0.01 C
ATOM 19 N6 A B1563 -22.636 -22.763 32.071 1.00 0.01 N
ATOM 20 N1 A B1563 -23.597 -24.072 33.713 1.00 0.01 N
ATOM 21 C2 A B1563 -24.469 -24.216 34.699 1.00 0.01 C
ATOM 22 N3 A B1563 -25.338 -23.371 35.197 1.00 0.01 N
ATOM 23 C4 A B1563 -25.257 -22.229 34.554 1.00 0.01 C
ATOM 24 P A B1564 -25.581 -17.548 38.906 1.00 0.01 P
ATOM 25 OP1 A B1564 -26.223 -16.541 39.789 1.00 0.01 O
ATOM 26 OP2 A B1564 -24.844 -17.079 37.701 1.00 0.01 O
ATOM 27 O5' A B1564 -24.646 -18.515 39.757 1.00 0.01 O
TER
ATOM 2 P C A1421 -20.403 -13.622 26.249 1.00 4.06 P
ATOM 3 OP1 C A1421 -19.167 -14.319 25.793 1.00 4.06 O
ATOM 4 OP2 C A1421 -20.510 -12.160 26.047 1.00 4.06 O
ATOM 5 O5' C A1421 -21.684 -14.333 25.643 1.00 4.06 O
ATOM 6 C5' C A1421 -21.671 -14.878 24.332 1.00 4.06 C
ATOM 7 C4' C A1421 -22.538 -16.116 24.228 1.00 4.06 C
ATOM 8 O4' C A1421 -22.577 -16.803 25.520 1.00 4.06 O
ATOM 9 C3' C A1421 -24.003 -15.882 23.827 1.00 4.06 C
ATOM 10 O3' C A1421 -24.380 -16.869 22.868 1.00 4.06 O
ATOM 11 C2' C A1421 -24.768 -16.108 25.143 1.00 4.06 C
ATOM 12 O2' C A1421 -26.100 -16.538 24.994 1.00 4.06 O
ATOM 13 C1' C A1421 -23.913 -17.182 25.788 1.00 4.06 C
ATOM 14 N1 C A1421 -24.101 -17.356 27.248 1.00 3.82 N
ATOM 15 C2 C A1421 -23.636 -18.569 27.777 1.00 3.82 C
ATOM 16 O2 C A1421 -23.085 -19.401 27.028 1.00 3.82 O
ATOM 17 N3 C A1421 -23.781 -18.817 29.102 1.00 3.82 N
ATOM 18 C4 C A1421 -24.402 -17.935 29.889 1.00 3.82 C
ATOM 19 N4 C A1421 -24.507 -18.258 31.181 1.00 3.82 N
ATOM 20 C5 C A1421 -24.897 -16.696 29.371 1.00 3.82 C
ATOM 21 C6 C A1421 -24.733 -16.454 28.054 1.00 3.82 C
ATOM 22 P G A1422 -24.364 -16.523 21.293 1.00 0.01 P
ATOM 23 OP1 G A1422 -23.894 -17.724 20.579 1.00 0.01 O
ATOM 24 OP2 G A1422 -23.606 -15.266 21.129 1.00 0.01 O
ATOM 25 O5' G A1422 -25.907 -16.262 20.987 1.00 0.01 O
TER
ATOM 1 O3' A B1562 -28.634 -17.175 32.629 1.00 0.01 O
ATOM 2 P A B1563 -27.465 -16.434 33.378 1.00 0.01 P
ATOM 3 OP1 A B1563 -28.003 -15.172 33.870 1.00 0.01 O
ATOM 4 OP2 A B1563 -26.318 -16.407 32.472 1.00 0.01 O
ATOM 5 O5' A B1563 -27.180 -17.404 34.581 1.00 0.01 O
ATOM 6 C5' A B1563 -28.117 -17.550 35.631 1.00 0.01 C
ATOM 7 C4' A B1563 -27.962 -18.879 36.309 1.00 0.01 C
ATOM 8 O4' A B1563 -27.882 -19.901 35.308 1.00 0.01 O
ATOM 9 C3' A B1563 -26.692 -19.083 37.116 1.00 0.01 C
ATOM 10 O3' A B1563 -26.754 -18.515 38.401 1.00 0.01 O
ATOM 11 C2' A B1563 -26.567 -20.587 37.144 1.00 0.01 C
ATOM 12 O2' A B1563 -27.459 -21.143 38.099 1.00 0.01 O
ATOM 13 C1' A B1563 -27.062 -20.948 35.756 1.00 0.01 C
ATOM 14 N9 A B1563 -25.979 -21.111 34.795 1.00 0.01 N
ATOM 15 C8 A B1563 -25.609 -20.187 33.892 1.00 0.01 C
ATOM 16 N7 A B1563 -24.671 -20.619 33.115 1.00 0.01 N
ATOM 17 C5 A B1563 -24.430 -21.920 33.525 1.00 0.01 C
ATOM 18 C6 A B1563 -23.537 -22.906 33.075 1.00 0.01 C
ATOM 19 N6 A B1563 -22.636 -22.763 32.071 1.00 0.01 N
ATOM 20 N1 A B1563 -23.597 -24.072 33.713 1.00 0.01 N
ATOM 21 C2 A B1563 -24.469 -24.216 34.699 1.00 0.01 C
ATOM 22 N3 A B1563 -25.338 -23.371 35.197 1.00 0.01 N
ATOM 23 C4 A B1563 -25.257 -22.229 34.554 1.00 0.01 C
ATOM 24 P A B1564 -25.581 -17.548 38.906 1.00 0.01 P
ATOM 25 OP1 A B1564 -26.223 -16.541 39.789 1.00 0.01 O
ATOM 26 OP2 A B1564 -24.844 -17.079 37.701 1.00 0.01 O
ATOM 27 O5' A B1564 -24.646 -18.515 39.757 1.00 0.01 O
TER
Atoms:
C2: (-23.636,-18.569,27.777)
OP1: (-19.167,-14.319,25.793)
OP2: (-20.510,-12.160,26.047)
C4: (-24.402,-17.935,29.889)
O5': (-21.684,-14.333,25.643)
C3': (-24.003,-15.882,23.827)
C1': (-23.913,-17.182,25.788)
O4': (-22.577,-16.803,25.520)
C5': (-21.671,-14.878,24.332)
P: (-20.403,-13.622,26.249)
O2: (-23.085,-19.401,27.028)
C4': (-22.538,-16.116,24.228)
C2': (-24.768,-16.108,25.143)
O2': (-26.100,-16.538,24.994)
N1: (-24.101,-17.356,27.248)
N3: (-23.781,-18.817,29.102)
N4: (-24.507,-18.258,31.181)
C6: (-24.733,-16.454,28.054)
C5: (-24.897,-16.696,29.371)
O3': (-24.380,-16.869,22.868)
OP1: (-19.167,-14.319,25.793)
OP2: (-20.510,-12.160,26.047)
C4: (-24.402,-17.935,29.889)
O5': (-21.684,-14.333,25.643)
C3': (-24.003,-15.882,23.827)
C1': (-23.913,-17.182,25.788)
O4': (-22.577,-16.803,25.520)
C5': (-21.671,-14.878,24.332)
P: (-20.403,-13.622,26.249)
O2: (-23.085,-19.401,27.028)
C4': (-22.538,-16.116,24.228)
C2': (-24.768,-16.108,25.143)
O2': (-26.100,-16.538,24.994)
N1: (-24.101,-17.356,27.248)
N3: (-23.781,-18.817,29.102)
N4: (-24.507,-18.258,31.181)
C6: (-24.733,-16.454,28.054)
C5: (-24.897,-16.696,29.371)
O3': (-24.380,-16.869,22.868)
OP1: (-28.003,-15.172,33.870)
OP2: (-26.318,-16.407,32.472)
C3': (-26.692,-19.083,37.116)
C1': (-27.062,-20.948,35.756)
C5': (-28.117,-17.550,35.631)
O4': (-27.882,-19.901,35.308)
C8: (-25.609,-20.187,33.892)
O2': (-27.459,-21.143,38.099)
C6: (-23.537,-22.906,33.075)
C5: (-24.430,-21.920,33.525)
C4: (-25.257,-22.229,34.554)
P: (-27.465,-16.434,33.378)
C4': (-27.962,-18.879,36.309)
C2': (-26.567,-20.587,37.144)
C2: (-24.469,-24.216,34.699)
N1: (-23.597,-24.072,33.713)
N3: (-25.338,-23.371,35.197)
N6: (-22.636,-22.763,32.071)
N7: (-24.671,-20.619,33.115)
N9: (-25.979,-21.111,34.795)
O5': (-27.180,-17.404,34.581)
O3': (-26.754,-18.515,38.401)
OP2: (-26.318,-16.407,32.472)
C3': (-26.692,-19.083,37.116)
C1': (-27.062,-20.948,35.756)
C5': (-28.117,-17.550,35.631)
O4': (-27.882,-19.901,35.308)
C8: (-25.609,-20.187,33.892)
O2': (-27.459,-21.143,38.099)
C6: (-23.537,-22.906,33.075)
C5: (-24.430,-21.920,33.525)
C4: (-25.257,-22.229,34.554)
P: (-27.465,-16.434,33.378)
C4': (-27.962,-18.879,36.309)
C2': (-26.567,-20.587,37.144)
C2: (-24.469,-24.216,34.699)
N1: (-23.597,-24.072,33.713)
N3: (-25.338,-23.371,35.197)
N6: (-22.636,-22.763,32.071)
N7: (-24.671,-20.619,33.115)
N9: (-25.979,-21.111,34.795)
O5': (-27.180,-17.404,34.581)
O3': (-26.754,-18.515,38.401)
Image (generated by PyMOL):