ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A119:A223

Extra

PDB:
ATOM 1 O3' G A 118 108.565 73.652 -25.006 1.00 65.83 O
ATOM 2 P A A 119 109.019 72.728 -26.260 1.00 63.94 P
ATOM 3 OP1 A A 119 110.171 73.390 -26.875 1.00 63.39 O
ATOM 4 OP2 A A 119 107.878 72.366 -27.093 1.00 63.35 O
ATOM 5 O5' A A 119 109.530 71.389 -25.583 1.00 65.19 O
ATOM 6 C5' A A 119 109.232 70.114 -26.177 1.00 64.69 C
ATOM 7 C4' A A 119 109.674 68.994 -25.273 1.00 65.16 C
ATOM 8 O4' A A 119 111.116 69.060 -25.101 1.00 65.29 O
ATOM 9 C3' A A 119 109.064 68.971 -23.876 1.00 65.32 C
ATOM 10 O3' A A 119 108.846 67.593 -23.557 1.00 64.52 O
ATOM 11 C2' A A 119 110.163 69.607 -23.017 1.00 66.67 C
ATOM 12 O2' A A 119 110.209 69.241 -21.648 1.00 67.90 O
ATOM 13 C1' A A 119 111.429 69.129 -23.724 1.00 66.81 C
ATOM 14 N9 A A 119 112.579 70.022 -23.560 1.00 67.53 N
ATOM 15 C8 A A 119 112.706 71.315 -24.001 1.00 67.71 C
ATOM 16 N7 A A 119 113.887 71.835 -23.776 1.00 68.38 N
ATOM 17 C5 A A 119 114.580 70.822 -23.131 1.00 67.15 C
ATOM 18 C6 A A 119 115.895 70.739 -22.651 1.00 67.50 C
ATOM 19 N6 A A 119 116.775 71.736 -22.741 1.00 67.72 N
ATOM 20 N1 A A 119 116.280 69.583 -22.064 1.00 67.86 N
ATOM 21 C2 A A 119 115.388 68.594 -21.958 1.00 66.86 C
ATOM 22 N3 A A 119 114.123 68.556 -22.367 1.00 67.87 N
ATOM 23 C4 A A 119 113.779 69.711 -22.963 1.00 67.21 C
ATOM 24 P C A 120 107.738 67.168 -22.472 1.00 64.08 P
ATOM 25 OP1 C A 120 107.787 65.684 -22.448 1.00 63.20 O
ATOM 26 OP2 C A 120 106.458 67.861 -22.748 1.00 63.81 O
ATOM 27 O5' C A 120 108.342 67.700 -21.087 1.00 63.45 O
TER

ATOM 1 O3' G B 222 120.998 67.063 -15.165 1.00 56.52 O
ATOM 2 P C B 223 122.053 68.115 -15.762 1.00 57.74 P
ATOM 3 OP1 C B 223 123.313 67.375 -16.087 1.00 55.49 O
ATOM 4 OP2 C B 223 122.085 69.280 -14.823 1.00 56.30 O
ATOM 5 O5' C B 223 121.385 68.550 -17.126 1.00 55.97 O
ATOM 6 C5' C B 223 121.021 67.566 -18.089 1.00 54.83 C
ATOM 7 C4' C B 223 120.145 68.173 -19.153 1.00 55.36 C
ATOM 8 O4' C B 223 118.831 68.473 -18.616 1.00 55.23 O
ATOM 9 C3' C B 223 120.611 69.493 -19.740 1.00 56.00 C
ATOM 10 O3' C B 223 121.633 69.334 -20.703 1.00 56.47 O
ATOM 11 C2' C B 223 119.317 70.051 -20.317 1.00 55.38 C
ATOM 12 O2' C B 223 118.978 69.430 -21.538 1.00 54.98 O
ATOM 13 C1' C B 223 118.305 69.623 -19.256 1.00 55.33 C
ATOM 14 N1 C B 223 118.113 70.681 -18.246 1.00 55.87 N
ATOM 15 C2 C B 223 117.283 71.758 -18.553 1.00 56.99 C
ATOM 16 O2 C B 223 116.699 71.772 -19.642 1.00 60.19 O
ATOM 17 N3 C B 223 117.131 72.758 -17.657 1.00 56.59 N
ATOM 18 C4 C B 223 117.758 72.702 -16.485 1.00 55.56 C
ATOM 19 N4 C B 223 117.575 73.711 -15.632 1.00 55.37 N
ATOM 20 C5 C B 223 118.598 71.608 -16.133 1.00 56.60 C
ATOM 21 C6 C B 223 118.746 70.628 -17.035 1.00 56.90 C
ATOM 22 P C B 224 122.701 70.517 -20.924 1.00 55.73 P
ATOM 23 OP1 C B 224 123.654 69.993 -21.949 1.00 55.82 O
ATOM 24 OP2 C B 224 123.201 71.023 -19.616 1.00 55.48 O
ATOM 25 O5' C B 224 121.842 71.655 -21.621 1.00 56.41 O
TER

Atoms:
OP1: (110.171,73.390,-26.875)
OP2: (107.878,72.366,-27.093)
C3': (109.064,68.971,-23.876)
C1': (111.429,69.129,-23.724)
C5': (109.232,70.114,-26.177)
O4': (111.116,69.060,-25.101)
C8: (112.706,71.315,-24.001)
O2': (110.209,69.241,-21.648)
C6: (115.895,70.739,-22.651)
C5: (114.580,70.822,-23.131)
C4: (113.779,69.711,-22.963)
P: (109.019,72.728,-26.260)
C4': (109.674,68.994,-25.273)
C2': (110.163,69.607,-23.017)
C2: (115.388,68.594,-21.958)
N1: (116.280,69.583,-22.064)
N3: (114.123,68.556,-22.367)
N6: (116.775,71.736,-22.741)
N7: (113.887,71.835,-23.776)
N9: (112.579,70.022,-23.560)
O5': (109.530,71.389,-25.583)
O3': (108.846,67.593,-23.557)
C2: (117.283,71.758,-18.553)
OP1: (123.313,67.375,-16.087)
OP2: (122.085,69.280,-14.823)
C4: (117.758,72.702,-16.485)
O5': (121.385,68.550,-17.126)
C3': (120.611,69.493,-19.740)
C1': (118.305,69.623,-19.256)
O4': (118.831,68.473,-18.616)
C5': (121.021,67.566,-18.089)
P: (122.053,68.115,-15.762)
O2: (116.699,71.772,-19.642)
C4': (120.145,68.173,-19.153)
C2': (119.317,70.051,-20.317)
O2': (118.978,69.430,-21.538)
N1: (118.113,70.681,-18.246)
N3: (117.131,72.758,-17.657)
N4: (117.575,73.711,-15.632)
C6: (118.746,70.628,-17.035)
C5: (118.598,71.608,-16.133)
O3': (121.633,69.334,-20.703)
Image (generated by PyMOL):
PyMOL image
show in jmol