Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1048:A1062
Extra
PDB:
ATOM 1 O3' U A1047 -55.026 90.139 55.376 1.00 55.21 O
ATOM 2 P C A1048 -53.727 89.525 54.678 1.00 52.71 P
ATOM 3 OP1 C A1048 -53.221 88.463 55.596 1.00 34.81 O
ATOM 4 OP2 C A1048 -52.824 90.652 54.265 1.00 34.82 O
ATOM 5 O5' C A1048 -54.315 88.852 53.354 1.00 43.38 O
ATOM 6 C5' C A1048 -55.467 87.974 53.402 1.00 43.14 C
ATOM 7 C4' C A1048 -55.924 87.638 52.002 1.00 43.44 C
ATOM 8 O4' C A1048 -56.469 88.825 51.369 1.00 41.85 O
ATOM 9 C3' C A1048 -54.804 87.182 51.083 1.00 45.46 C
ATOM 10 O3' C A1048 -54.561 85.790 51.201 1.00 48.06 O
ATOM 11 C2' C A1048 -55.302 87.580 49.701 1.00 44.32 C
ATOM 12 O2' C A1048 -56.155 86.607 49.123 1.00 44.75 O
ATOM 13 C1' C A1048 -56.079 88.868 50.005 1.00 42.01 C
ATOM 14 N1 C A1048 -55.290 90.100 49.787 1.00 43.45 N
ATOM 15 C2 C A1048 -54.973 90.497 48.466 1.00 44.50 C
ATOM 16 O2 C A1048 -55.372 89.809 47.510 1.00 45.36 O
ATOM 17 N3 C A1048 -54.240 91.619 48.272 1.00 43.23 N
ATOM 18 C4 C A1048 -53.824 92.336 49.322 1.00 42.83 C
ATOM 19 N4 C A1048 -53.094 93.429 49.086 1.00 42.15 N
ATOM 20 C5 C A1048 -54.135 91.962 50.665 1.00 42.52 C
ATOM 21 C6 C A1048 -54.862 90.851 50.848 1.00 43.04 C
ATOM 22 P G A1049 -53.142 85.199 50.748 1.00 53.18 P
ATOM 23 OP1 G A1049 -53.128 83.768 51.129 1.00 57.00 O
ATOM 24 OP2 G A1049 -52.069 86.096 51.243 1.00 56.51 O
ATOM 25 O5' G A1049 -53.171 85.318 49.160 1.00 58.42 O
TER
ATOM 1 O3' G B1061 -49.384 99.967 46.145 1.00 45.11 O
ATOM 2 P U B1062 -50.779 100.751 46.329 1.00 83.68 P
ATOM 3 OP1 U B1062 -51.899 99.786 46.232 1.00 69.82 O
ATOM 4 OP2 U B1062 -50.725 101.916 45.405 1.00 71.77 O
ATOM 5 O5' U B1062 -50.764 101.279 47.830 1.00 73.19 O
ATOM 6 C5' U B1062 -51.720 102.268 48.268 1.00 74.93 C
ATOM 7 C4' U B1062 -51.748 102.353 49.780 1.00 76.60 C
ATOM 8 O4' U B1062 -52.463 101.216 50.327 1.00 76.13 O
ATOM 9 C3' U B1062 -50.385 102.389 50.464 1.00 77.91 C
ATOM 10 O3' U B1062 -50.468 103.263 51.588 1.00 80.09 O
ATOM 11 C2' U B1062 -50.198 100.940 50.917 1.00 77.75 C
ATOM 12 O2' U B1062 -49.345 100.787 52.034 1.00 78.00 O
ATOM 13 C1' U B1062 -51.637 100.534 51.243 1.00 77.73 C
ATOM 14 N1 U B1062 -51.928 99.095 51.141 1.00 79.60 N
ATOM 15 C2 U B1062 -52.168 98.413 52.315 1.00 80.17 C
ATOM 16 O2 U B1062 -52.122 98.946 53.410 1.00 82.30 O
ATOM 17 N3 U B1062 -52.462 97.082 52.166 1.00 80.47 N
ATOM 18 C4 U B1062 -52.532 96.373 50.990 1.00 80.40 C
ATOM 19 O4 U B1062 -52.776 95.164 51.026 1.00 81.13 O
ATOM 20 C5 U B1062 -52.262 97.144 49.814 1.00 80.54 C
ATOM 21 C6 U B1062 -51.975 98.447 49.927 1.00 80.45 C
ATOM 22 P U B1063 -50.015 104.798 51.443 1.00 66.55 P
ATOM 23 OP1 U B1063 -50.755 105.559 52.485 1.00116.78 O
ATOM 24 OP2 U B1063 -50.146 105.203 50.020 1.00116.48 O
ATOM 25 O5' U B1063 -48.459 104.784 51.811 1.00118.78 O
TER
ATOM 2 P C A1048 -53.727 89.525 54.678 1.00 52.71 P
ATOM 3 OP1 C A1048 -53.221 88.463 55.596 1.00 34.81 O
ATOM 4 OP2 C A1048 -52.824 90.652 54.265 1.00 34.82 O
ATOM 5 O5' C A1048 -54.315 88.852 53.354 1.00 43.38 O
ATOM 6 C5' C A1048 -55.467 87.974 53.402 1.00 43.14 C
ATOM 7 C4' C A1048 -55.924 87.638 52.002 1.00 43.44 C
ATOM 8 O4' C A1048 -56.469 88.825 51.369 1.00 41.85 O
ATOM 9 C3' C A1048 -54.804 87.182 51.083 1.00 45.46 C
ATOM 10 O3' C A1048 -54.561 85.790 51.201 1.00 48.06 O
ATOM 11 C2' C A1048 -55.302 87.580 49.701 1.00 44.32 C
ATOM 12 O2' C A1048 -56.155 86.607 49.123 1.00 44.75 O
ATOM 13 C1' C A1048 -56.079 88.868 50.005 1.00 42.01 C
ATOM 14 N1 C A1048 -55.290 90.100 49.787 1.00 43.45 N
ATOM 15 C2 C A1048 -54.973 90.497 48.466 1.00 44.50 C
ATOM 16 O2 C A1048 -55.372 89.809 47.510 1.00 45.36 O
ATOM 17 N3 C A1048 -54.240 91.619 48.272 1.00 43.23 N
ATOM 18 C4 C A1048 -53.824 92.336 49.322 1.00 42.83 C
ATOM 19 N4 C A1048 -53.094 93.429 49.086 1.00 42.15 N
ATOM 20 C5 C A1048 -54.135 91.962 50.665 1.00 42.52 C
ATOM 21 C6 C A1048 -54.862 90.851 50.848 1.00 43.04 C
ATOM 22 P G A1049 -53.142 85.199 50.748 1.00 53.18 P
ATOM 23 OP1 G A1049 -53.128 83.768 51.129 1.00 57.00 O
ATOM 24 OP2 G A1049 -52.069 86.096 51.243 1.00 56.51 O
ATOM 25 O5' G A1049 -53.171 85.318 49.160 1.00 58.42 O
TER
ATOM 1 O3' G B1061 -49.384 99.967 46.145 1.00 45.11 O
ATOM 2 P U B1062 -50.779 100.751 46.329 1.00 83.68 P
ATOM 3 OP1 U B1062 -51.899 99.786 46.232 1.00 69.82 O
ATOM 4 OP2 U B1062 -50.725 101.916 45.405 1.00 71.77 O
ATOM 5 O5' U B1062 -50.764 101.279 47.830 1.00 73.19 O
ATOM 6 C5' U B1062 -51.720 102.268 48.268 1.00 74.93 C
ATOM 7 C4' U B1062 -51.748 102.353 49.780 1.00 76.60 C
ATOM 8 O4' U B1062 -52.463 101.216 50.327 1.00 76.13 O
ATOM 9 C3' U B1062 -50.385 102.389 50.464 1.00 77.91 C
ATOM 10 O3' U B1062 -50.468 103.263 51.588 1.00 80.09 O
ATOM 11 C2' U B1062 -50.198 100.940 50.917 1.00 77.75 C
ATOM 12 O2' U B1062 -49.345 100.787 52.034 1.00 78.00 O
ATOM 13 C1' U B1062 -51.637 100.534 51.243 1.00 77.73 C
ATOM 14 N1 U B1062 -51.928 99.095 51.141 1.00 79.60 N
ATOM 15 C2 U B1062 -52.168 98.413 52.315 1.00 80.17 C
ATOM 16 O2 U B1062 -52.122 98.946 53.410 1.00 82.30 O
ATOM 17 N3 U B1062 -52.462 97.082 52.166 1.00 80.47 N
ATOM 18 C4 U B1062 -52.532 96.373 50.990 1.00 80.40 C
ATOM 19 O4 U B1062 -52.776 95.164 51.026 1.00 81.13 O
ATOM 20 C5 U B1062 -52.262 97.144 49.814 1.00 80.54 C
ATOM 21 C6 U B1062 -51.975 98.447 49.927 1.00 80.45 C
ATOM 22 P U B1063 -50.015 104.798 51.443 1.00 66.55 P
ATOM 23 OP1 U B1063 -50.755 105.559 52.485 1.00116.78 O
ATOM 24 OP2 U B1063 -50.146 105.203 50.020 1.00116.48 O
ATOM 25 O5' U B1063 -48.459 104.784 51.811 1.00118.78 O
TER
Atoms:
C2: (-54.973,90.497,48.466)
OP1: (-53.221,88.463,55.596)
OP2: (-52.824,90.652,54.265)
C4: (-53.824,92.336,49.322)
O5': (-54.315,88.852,53.354)
C3': (-54.804,87.182,51.083)
C1': (-56.079,88.868,50.005)
O4': (-56.469,88.825,51.369)
C5': (-55.467,87.974,53.402)
P: (-53.727,89.525,54.678)
O2: (-55.372,89.809,47.510)
C4': (-55.924,87.638,52.002)
C2': (-55.302,87.580,49.701)
O2': (-56.155,86.607,49.123)
N1: (-55.290,90.100,49.787)
N3: (-54.240,91.619,48.272)
N4: (-53.094,93.429,49.086)
C6: (-54.862,90.851,50.848)
C5: (-54.135,91.962,50.665)
O3': (-54.561,85.790,51.201)
OP1: (-53.221,88.463,55.596)
OP2: (-52.824,90.652,54.265)
C4: (-53.824,92.336,49.322)
O5': (-54.315,88.852,53.354)
C3': (-54.804,87.182,51.083)
C1': (-56.079,88.868,50.005)
O4': (-56.469,88.825,51.369)
C5': (-55.467,87.974,53.402)
P: (-53.727,89.525,54.678)
O2: (-55.372,89.809,47.510)
C4': (-55.924,87.638,52.002)
C2': (-55.302,87.580,49.701)
O2': (-56.155,86.607,49.123)
N1: (-55.290,90.100,49.787)
N3: (-54.240,91.619,48.272)
N4: (-53.094,93.429,49.086)
C6: (-54.862,90.851,50.848)
C5: (-54.135,91.962,50.665)
O3': (-54.561,85.790,51.201)
C4: (-52.532,96.373,50.990)
N3: (-52.462,97.082,52.166)
OP1: (-51.899,99.786,46.232)
OP2: (-50.725,101.916,45.405)
C2: (-52.168,98.413,52.315)
C1': (-51.637,100.534,51.243)
C3': (-50.385,102.389,50.464)
O5': (-50.764,101.279,47.830)
O4': (-52.463,101.216,50.327)
C5': (-51.720,102.268,48.268)
P: (-50.779,100.751,46.329)
C4': (-51.748,102.353,49.780)
C2': (-50.198,100.940,50.917)
O2': (-49.345,100.787,52.034)
N1: (-51.928,99.095,51.141)
O4: (-52.776,95.164,51.026)
O2: (-52.122,98.946,53.410)
C6: (-51.975,98.447,49.927)
C5: (-52.262,97.144,49.814)
O3': (-50.468,103.263,51.588)
N3: (-52.462,97.082,52.166)
OP1: (-51.899,99.786,46.232)
OP2: (-50.725,101.916,45.405)
C2: (-52.168,98.413,52.315)
C1': (-51.637,100.534,51.243)
C3': (-50.385,102.389,50.464)
O5': (-50.764,101.279,47.830)
O4': (-52.463,101.216,50.327)
C5': (-51.720,102.268,48.268)
P: (-50.779,100.751,46.329)
C4': (-51.748,102.353,49.780)
C2': (-50.198,100.940,50.917)
O2': (-49.345,100.787,52.034)
N1: (-51.928,99.095,51.141)
O4: (-52.776,95.164,51.026)
O2: (-52.122,98.946,53.410)
C6: (-51.975,98.447,49.927)
C5: (-52.262,97.144,49.814)
O3': (-50.468,103.263,51.588)
Image (generated by PyMOL):