Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A969:A968
Extra
PDB:
ATOM 1 O3' U A 968 61.788 57.553 110.485 1.00 44.63 O
ATOM 2 P C A 969 61.758 56.093 109.812 1.00 44.54 P
ATOM 3 OP1 C A 969 63.129 55.594 109.948 1.00 44.72 O
ATOM 4 OP2 C A 969 61.105 56.079 108.484 1.00 44.73 O
ATOM 5 O5' C A 969 60.841 55.257 110.807 1.00 45.30 O
ATOM 6 C5' C A 969 61.240 53.949 111.237 1.00 46.33 C
ATOM 7 C4' C A 969 60.333 53.451 112.328 1.00 47.13 C
ATOM 8 O4' C A 969 60.623 54.102 113.593 1.00 47.87 O
ATOM 9 C3' C A 969 58.875 53.773 112.108 1.00 46.92 C
ATOM 10 O3' C A 969 58.241 52.962 111.139 1.00 46.59 O
ATOM 11 C2' C A 969 58.304 53.607 113.503 1.00 47.46 C
ATOM 12 O2' C A 969 58.125 52.264 113.890 1.00 48.05 O
ATOM 13 C1' C A 969 59.417 54.233 114.338 1.00 48.47 C
ATOM 14 N1 C A 969 59.112 55.659 114.518 1.00 50.50 N
ATOM 15 C2 C A 969 58.215 56.024 115.525 1.00 51.38 C
ATOM 16 O2 C A 969 57.729 55.135 116.241 1.00 54.76 O
ATOM 17 N3 C A 969 57.894 57.321 115.681 1.00 50.56 N
ATOM 18 C4 C A 969 58.424 58.239 114.872 1.00 50.76 C
ATOM 19 N4 C A 969 58.067 59.510 115.054 1.00 50.97 N
ATOM 20 C5 C A 969 59.342 57.897 113.840 1.00 50.64 C
ATOM 21 C6 C A 969 59.662 56.609 113.706 1.00 50.11 C
ATOM 22 P C A 970 57.022 53.572 110.293 1.00 47.16 P
ATOM 23 OP1 C A 970 56.196 52.438 109.840 1.00 46.83 O
ATOM 24 OP2 C A 970 57.560 54.543 109.294 1.00 47.20 O
ATOM 25 O5' C A 970 56.203 54.364 111.399 1.00 44.00 O
TER
ATOM 1 O3' C B 967 65.705 62.852 108.495 1.00 39.85 O
ATOM 2 P U B 968 64.470 62.092 107.781 1.00 42.20 P
ATOM 3 OP1 U B 968 65.077 61.165 106.806 1.00 41.74 O
ATOM 4 OP2 U B 968 63.464 63.089 107.309 1.00 42.60 O
ATOM 5 O5' U B 968 63.790 61.191 108.917 1.00 42.17 O
ATOM 6 C5' U B 968 64.437 59.999 109.434 1.00 43.83 C
ATOM 7 C4' U B 968 63.518 59.269 110.394 1.00 44.15 C
ATOM 8 O4' U B 968 63.050 60.220 111.387 1.00 44.40 O
ATOM 9 C3' U B 968 62.265 58.683 109.751 1.00 44.26 C
ATOM 10 O3' U B 968 61.788 57.553 110.485 1.00 44.63 O
ATOM 11 C2' U B 968 61.262 59.819 109.911 1.00 45.26 C
ATOM 12 O2' U B 968 59.915 59.355 109.865 1.00 44.92 O
ATOM 13 C1' U B 968 61.645 60.359 111.289 1.00 44.29 C
ATOM 14 N1 U B 968 61.295 61.770 111.520 1.00 44.97 N
ATOM 15 C2 U B 968 60.300 62.055 112.451 1.00 45.94 C
ATOM 16 O2 U B 968 59.681 61.196 113.046 1.00 46.57 O
ATOM 17 N3 U B 968 60.058 63.392 112.652 1.00 46.66 N
ATOM 18 C4 U B 968 60.680 64.450 112.018 1.00 47.56 C
ATOM 19 O4 U B 968 60.330 65.608 112.275 1.00 47.94 O
ATOM 20 C5 U B 968 61.677 64.067 111.063 1.00 46.92 C
ATOM 21 C6 U B 968 61.940 62.775 110.853 1.00 45.43 C
ATOM 22 P C B 969 61.758 56.093 109.812 1.00 44.54 P
ATOM 23 OP1 C B 969 63.129 55.594 109.948 1.00 44.72 O
ATOM 24 OP2 C B 969 61.105 56.079 108.484 1.00 44.73 O
ATOM 25 O5' C B 969 60.841 55.257 110.807 1.00 45.30 O
TER
ATOM 2 P C A 969 61.758 56.093 109.812 1.00 44.54 P
ATOM 3 OP1 C A 969 63.129 55.594 109.948 1.00 44.72 O
ATOM 4 OP2 C A 969 61.105 56.079 108.484 1.00 44.73 O
ATOM 5 O5' C A 969 60.841 55.257 110.807 1.00 45.30 O
ATOM 6 C5' C A 969 61.240 53.949 111.237 1.00 46.33 C
ATOM 7 C4' C A 969 60.333 53.451 112.328 1.00 47.13 C
ATOM 8 O4' C A 969 60.623 54.102 113.593 1.00 47.87 O
ATOM 9 C3' C A 969 58.875 53.773 112.108 1.00 46.92 C
ATOM 10 O3' C A 969 58.241 52.962 111.139 1.00 46.59 O
ATOM 11 C2' C A 969 58.304 53.607 113.503 1.00 47.46 C
ATOM 12 O2' C A 969 58.125 52.264 113.890 1.00 48.05 O
ATOM 13 C1' C A 969 59.417 54.233 114.338 1.00 48.47 C
ATOM 14 N1 C A 969 59.112 55.659 114.518 1.00 50.50 N
ATOM 15 C2 C A 969 58.215 56.024 115.525 1.00 51.38 C
ATOM 16 O2 C A 969 57.729 55.135 116.241 1.00 54.76 O
ATOM 17 N3 C A 969 57.894 57.321 115.681 1.00 50.56 N
ATOM 18 C4 C A 969 58.424 58.239 114.872 1.00 50.76 C
ATOM 19 N4 C A 969 58.067 59.510 115.054 1.00 50.97 N
ATOM 20 C5 C A 969 59.342 57.897 113.840 1.00 50.64 C
ATOM 21 C6 C A 969 59.662 56.609 113.706 1.00 50.11 C
ATOM 22 P C A 970 57.022 53.572 110.293 1.00 47.16 P
ATOM 23 OP1 C A 970 56.196 52.438 109.840 1.00 46.83 O
ATOM 24 OP2 C A 970 57.560 54.543 109.294 1.00 47.20 O
ATOM 25 O5' C A 970 56.203 54.364 111.399 1.00 44.00 O
TER
ATOM 1 O3' C B 967 65.705 62.852 108.495 1.00 39.85 O
ATOM 2 P U B 968 64.470 62.092 107.781 1.00 42.20 P
ATOM 3 OP1 U B 968 65.077 61.165 106.806 1.00 41.74 O
ATOM 4 OP2 U B 968 63.464 63.089 107.309 1.00 42.60 O
ATOM 5 O5' U B 968 63.790 61.191 108.917 1.00 42.17 O
ATOM 6 C5' U B 968 64.437 59.999 109.434 1.00 43.83 C
ATOM 7 C4' U B 968 63.518 59.269 110.394 1.00 44.15 C
ATOM 8 O4' U B 968 63.050 60.220 111.387 1.00 44.40 O
ATOM 9 C3' U B 968 62.265 58.683 109.751 1.00 44.26 C
ATOM 10 O3' U B 968 61.788 57.553 110.485 1.00 44.63 O
ATOM 11 C2' U B 968 61.262 59.819 109.911 1.00 45.26 C
ATOM 12 O2' U B 968 59.915 59.355 109.865 1.00 44.92 O
ATOM 13 C1' U B 968 61.645 60.359 111.289 1.00 44.29 C
ATOM 14 N1 U B 968 61.295 61.770 111.520 1.00 44.97 N
ATOM 15 C2 U B 968 60.300 62.055 112.451 1.00 45.94 C
ATOM 16 O2 U B 968 59.681 61.196 113.046 1.00 46.57 O
ATOM 17 N3 U B 968 60.058 63.392 112.652 1.00 46.66 N
ATOM 18 C4 U B 968 60.680 64.450 112.018 1.00 47.56 C
ATOM 19 O4 U B 968 60.330 65.608 112.275 1.00 47.94 O
ATOM 20 C5 U B 968 61.677 64.067 111.063 1.00 46.92 C
ATOM 21 C6 U B 968 61.940 62.775 110.853 1.00 45.43 C
ATOM 22 P C B 969 61.758 56.093 109.812 1.00 44.54 P
ATOM 23 OP1 C B 969 63.129 55.594 109.948 1.00 44.72 O
ATOM 24 OP2 C B 969 61.105 56.079 108.484 1.00 44.73 O
ATOM 25 O5' C B 969 60.841 55.257 110.807 1.00 45.30 O
TER
Atoms:
C2: (58.215,56.024,115.525)
OP1: (63.129,55.594,109.948)
OP2: (61.105,56.079,108.484)
C4: (58.424,58.239,114.872)
O5': (60.841,55.257,110.807)
C3': (58.875,53.773,112.108)
C1': (59.417,54.233,114.338)
O4': (60.623,54.102,113.593)
C5': (61.240,53.949,111.237)
P: (61.758,56.093,109.812)
O2: (57.729,55.135,116.241)
C4': (60.333,53.451,112.328)
C2': (58.304,53.607,113.503)
O2': (58.125,52.264,113.890)
N1: (59.112,55.659,114.518)
N3: (57.894,57.321,115.681)
N4: (58.067,59.510,115.054)
C6: (59.662,56.609,113.706)
C5: (59.342,57.897,113.840)
O3': (58.241,52.962,111.139)
OP1: (63.129,55.594,109.948)
OP2: (61.105,56.079,108.484)
C4: (58.424,58.239,114.872)
O5': (60.841,55.257,110.807)
C3': (58.875,53.773,112.108)
C1': (59.417,54.233,114.338)
O4': (60.623,54.102,113.593)
C5': (61.240,53.949,111.237)
P: (61.758,56.093,109.812)
O2: (57.729,55.135,116.241)
C4': (60.333,53.451,112.328)
C2': (58.304,53.607,113.503)
O2': (58.125,52.264,113.890)
N1: (59.112,55.659,114.518)
N3: (57.894,57.321,115.681)
N4: (58.067,59.510,115.054)
C6: (59.662,56.609,113.706)
C5: (59.342,57.897,113.840)
O3': (58.241,52.962,111.139)
C4: (60.680,64.450,112.018)
N3: (60.058,63.392,112.652)
OP1: (65.077,61.165,106.806)
OP2: (63.464,63.089,107.309)
C2: (60.300,62.055,112.451)
C1': (61.645,60.359,111.289)
C3': (62.265,58.683,109.751)
O5': (63.790,61.191,108.917)
O4': (63.050,60.220,111.387)
C5': (64.437,59.999,109.434)
P: (64.470,62.092,107.781)
C4': (63.518,59.269,110.394)
C2': (61.262,59.819,109.911)
O2': (59.915,59.355,109.865)
N1: (61.295,61.770,111.520)
O4: (60.330,65.608,112.275)
O2: (59.681,61.196,113.046)
C6: (61.940,62.775,110.853)
C5: (61.677,64.067,111.063)
O3': (61.788,57.553,110.485)
N3: (60.058,63.392,112.652)
OP1: (65.077,61.165,106.806)
OP2: (63.464,63.089,107.309)
C2: (60.300,62.055,112.451)
C1': (61.645,60.359,111.289)
C3': (62.265,58.683,109.751)
O5': (63.790,61.191,108.917)
O4': (63.050,60.220,111.387)
C5': (64.437,59.999,109.434)
P: (64.470,62.092,107.781)
C4': (63.518,59.269,110.394)
C2': (61.262,59.819,109.911)
O2': (59.915,59.355,109.865)
N1: (61.295,61.770,111.520)
O4: (60.330,65.608,112.275)
O2: (59.681,61.196,113.046)
C6: (61.940,62.775,110.853)
C5: (61.677,64.067,111.063)
O3': (61.788,57.553,110.485)
Image (generated by PyMOL):