Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21107:21004
Extra
PDB:
ATOM 1 O3' A A1106 -28.874 8.518 92.379 1.00 62.58 O
ATOM 2 P A A1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 3 OP1 A A1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 4 OP2 A A1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 5 O5' A A1107 -31.091 7.692 91.687 1.00 56.39 O
ATOM 6 C5' A A1107 -30.783 6.339 91.565 1.00 56.48 C
ATOM 7 C4' A A1107 -31.775 5.553 92.321 1.00 56.67 C
ATOM 8 O4' A A1107 -31.670 5.904 93.718 1.00 56.87 O
ATOM 9 C3' A A1107 -33.197 5.868 91.989 1.00 56.61 C
ATOM 10 O3' A A1107 -33.630 5.224 90.800 1.00 56.50 O
ATOM 11 C2' A A1107 -33.912 5.411 93.250 1.00 56.88 C
ATOM 12 O2' A A1107 -33.981 3.995 93.288 1.00 57.02 O
ATOM 13 C1' A A1107 -32.924 5.852 94.324 1.00 57.00 C
ATOM 14 N9 A A1107 -33.244 7.183 94.862 1.00 56.98 N
ATOM 15 C8 A A1107 -32.982 8.404 94.322 1.00 56.77 C
ATOM 16 N7 A A1107 -33.422 9.426 95.021 1.00 56.82 N
ATOM 17 C5 A A1107 -34.040 8.845 96.105 1.00 57.08 C
ATOM 18 C6 A A1107 -34.736 9.385 97.199 1.00 57.27 C
ATOM 19 N6 A A1107 -34.909 10.690 97.409 1.00 57.22 N
ATOM 20 N1 A A1107 -35.243 8.539 98.108 1.00 57.54 N
ATOM 21 C2 A A1107 -35.065 7.231 97.927 1.00 57.62 C
ATOM 22 N3 A A1107 -34.451 6.589 96.933 1.00 57.46 N
ATOM 23 C4 A A1107 -33.940 7.465 96.027 1.00 57.18 C
ATOM 24 P G A1108 -34.567 6.009 89.745 1.00 53.62 P
ATOM 25 OP1 G A1108 -34.724 5.130 88.566 1.00 53.53 O
ATOM 26 OP2 G A1108 -33.972 7.369 89.562 1.00 53.48 O
ATOM 27 O5' G A1108 -35.968 6.111 90.519 1.00 53.78 O
TER
ATOM 1 O3' C B1003 -33.574 13.580 104.062 1.00 75.57 O
ATOM 2 P C B1004 -35.030 14.102 103.588 1.00 65.18 P
ATOM 3 OP1 C B1004 -34.816 15.343 102.769 1.00 64.37 O
ATOM 4 OP2 C B1004 -35.901 14.182 104.794 1.00 65.77 O
ATOM 5 O5' C B1004 -35.517 12.911 102.643 1.00 65.19 O
ATOM 6 C5' C B1004 -34.737 12.493 101.522 1.00 64.82 C
ATOM 7 C4' C B1004 -35.297 11.237 100.928 1.00 65.07 C
ATOM 8 O4' C B1004 -35.166 10.168 101.887 1.00 65.90 O
ATOM 9 C3' C B1004 -36.769 11.308 100.586 1.00 64.99 C
ATOM 10 O3' C B1004 -36.976 11.711 99.251 1.00 64.32 O
ATOM 11 C2' C B1004 -37.339 9.926 100.926 1.00 65.72 C
ATOM 12 O2' C B1004 -37.371 9.089 99.785 1.00 65.60 O
ATOM 13 C1' C B1004 -36.318 9.364 101.911 1.00 66.30 C
ATOM 14 N1 C B1004 -36.818 9.287 103.303 1.00 67.00 N
ATOM 15 C2 C B1004 -37.431 8.096 103.654 1.00 67.72 C
ATOM 16 O2 C B1004 -37.570 7.234 102.784 1.00 67.71 O
ATOM 17 N3 C B1004 -37.890 7.901 104.899 1.00 68.44 N
ATOM 18 C4 C B1004 -37.720 8.858 105.799 1.00 68.46 C
ATOM 19 N4 C B1004 -38.214 8.588 107.010 1.00 69.25 N
ATOM 20 C5 C B1004 -37.060 10.098 105.499 1.00 67.74 C
ATOM 21 C6 C B1004 -36.622 10.263 104.241 1.00 67.02 C
ATOM 22 P A B1005 -38.216 12.651 98.886 1.00 59.86 P
ATOM 23 OP1 A B1005 -38.236 12.789 97.416 1.00 59.28 O
ATOM 24 OP2 A B1005 -38.124 13.877 99.716 1.00 59.74 O
ATOM 25 O5' A B1005 -39.438 11.791 99.381 1.00 60.50 O
TER
ATOM 2 P A A1107 -30.039 8.786 91.328 1.00 56.25 P
ATOM 3 OP1 A A1107 -29.485 8.504 89.981 1.00 56.10 O
ATOM 4 OP2 A A1107 -30.606 10.145 91.609 1.00 56.20 O
ATOM 5 O5' A A1107 -31.091 7.692 91.687 1.00 56.39 O
ATOM 6 C5' A A1107 -30.783 6.339 91.565 1.00 56.48 C
ATOM 7 C4' A A1107 -31.775 5.553 92.321 1.00 56.67 C
ATOM 8 O4' A A1107 -31.670 5.904 93.718 1.00 56.87 O
ATOM 9 C3' A A1107 -33.197 5.868 91.989 1.00 56.61 C
ATOM 10 O3' A A1107 -33.630 5.224 90.800 1.00 56.50 O
ATOM 11 C2' A A1107 -33.912 5.411 93.250 1.00 56.88 C
ATOM 12 O2' A A1107 -33.981 3.995 93.288 1.00 57.02 O
ATOM 13 C1' A A1107 -32.924 5.852 94.324 1.00 57.00 C
ATOM 14 N9 A A1107 -33.244 7.183 94.862 1.00 56.98 N
ATOM 15 C8 A A1107 -32.982 8.404 94.322 1.00 56.77 C
ATOM 16 N7 A A1107 -33.422 9.426 95.021 1.00 56.82 N
ATOM 17 C5 A A1107 -34.040 8.845 96.105 1.00 57.08 C
ATOM 18 C6 A A1107 -34.736 9.385 97.199 1.00 57.27 C
ATOM 19 N6 A A1107 -34.909 10.690 97.409 1.00 57.22 N
ATOM 20 N1 A A1107 -35.243 8.539 98.108 1.00 57.54 N
ATOM 21 C2 A A1107 -35.065 7.231 97.927 1.00 57.62 C
ATOM 22 N3 A A1107 -34.451 6.589 96.933 1.00 57.46 N
ATOM 23 C4 A A1107 -33.940 7.465 96.027 1.00 57.18 C
ATOM 24 P G A1108 -34.567 6.009 89.745 1.00 53.62 P
ATOM 25 OP1 G A1108 -34.724 5.130 88.566 1.00 53.53 O
ATOM 26 OP2 G A1108 -33.972 7.369 89.562 1.00 53.48 O
ATOM 27 O5' G A1108 -35.968 6.111 90.519 1.00 53.78 O
TER
ATOM 1 O3' C B1003 -33.574 13.580 104.062 1.00 75.57 O
ATOM 2 P C B1004 -35.030 14.102 103.588 1.00 65.18 P
ATOM 3 OP1 C B1004 -34.816 15.343 102.769 1.00 64.37 O
ATOM 4 OP2 C B1004 -35.901 14.182 104.794 1.00 65.77 O
ATOM 5 O5' C B1004 -35.517 12.911 102.643 1.00 65.19 O
ATOM 6 C5' C B1004 -34.737 12.493 101.522 1.00 64.82 C
ATOM 7 C4' C B1004 -35.297 11.237 100.928 1.00 65.07 C
ATOM 8 O4' C B1004 -35.166 10.168 101.887 1.00 65.90 O
ATOM 9 C3' C B1004 -36.769 11.308 100.586 1.00 64.99 C
ATOM 10 O3' C B1004 -36.976 11.711 99.251 1.00 64.32 O
ATOM 11 C2' C B1004 -37.339 9.926 100.926 1.00 65.72 C
ATOM 12 O2' C B1004 -37.371 9.089 99.785 1.00 65.60 O
ATOM 13 C1' C B1004 -36.318 9.364 101.911 1.00 66.30 C
ATOM 14 N1 C B1004 -36.818 9.287 103.303 1.00 67.00 N
ATOM 15 C2 C B1004 -37.431 8.096 103.654 1.00 67.72 C
ATOM 16 O2 C B1004 -37.570 7.234 102.784 1.00 67.71 O
ATOM 17 N3 C B1004 -37.890 7.901 104.899 1.00 68.44 N
ATOM 18 C4 C B1004 -37.720 8.858 105.799 1.00 68.46 C
ATOM 19 N4 C B1004 -38.214 8.588 107.010 1.00 69.25 N
ATOM 20 C5 C B1004 -37.060 10.098 105.499 1.00 67.74 C
ATOM 21 C6 C B1004 -36.622 10.263 104.241 1.00 67.02 C
ATOM 22 P A B1005 -38.216 12.651 98.886 1.00 59.86 P
ATOM 23 OP1 A B1005 -38.236 12.789 97.416 1.00 59.28 O
ATOM 24 OP2 A B1005 -38.124 13.877 99.716 1.00 59.74 O
ATOM 25 O5' A B1005 -39.438 11.791 99.381 1.00 60.50 O
TER
Atoms:
OP1: (-29.485,8.504,89.981)
OP2: (-30.606,10.145,91.609)
C3': (-33.197,5.868,91.989)
C1': (-32.924,5.852,94.324)
C5': (-30.783,6.339,91.565)
O4': (-31.670,5.904,93.718)
C8: (-32.982,8.404,94.322)
O2': (-33.981,3.995,93.288)
C6: (-34.736,9.385,97.199)
C5: (-34.040,8.845,96.105)
C4: (-33.940,7.465,96.027)
P: (-30.039,8.786,91.328)
C4': (-31.775,5.553,92.321)
C2': (-33.912,5.411,93.250)
C2: (-35.065,7.231,97.927)
N1: (-35.243,8.539,98.108)
N3: (-34.451,6.589,96.933)
N6: (-34.909,10.690,97.409)
N7: (-33.422,9.426,95.021)
N9: (-33.244,7.183,94.862)
O5': (-31.091,7.692,91.687)
O3': (-33.630,5.224,90.800)
OP2: (-30.606,10.145,91.609)
C3': (-33.197,5.868,91.989)
C1': (-32.924,5.852,94.324)
C5': (-30.783,6.339,91.565)
O4': (-31.670,5.904,93.718)
C8: (-32.982,8.404,94.322)
O2': (-33.981,3.995,93.288)
C6: (-34.736,9.385,97.199)
C5: (-34.040,8.845,96.105)
C4: (-33.940,7.465,96.027)
P: (-30.039,8.786,91.328)
C4': (-31.775,5.553,92.321)
C2': (-33.912,5.411,93.250)
C2: (-35.065,7.231,97.927)
N1: (-35.243,8.539,98.108)
N3: (-34.451,6.589,96.933)
N6: (-34.909,10.690,97.409)
N7: (-33.422,9.426,95.021)
N9: (-33.244,7.183,94.862)
O5': (-31.091,7.692,91.687)
O3': (-33.630,5.224,90.800)
C2: (-37.431,8.096,103.654)
OP1: (-34.816,15.343,102.769)
OP2: (-35.901,14.182,104.794)
C4: (-37.720,8.858,105.799)
O5': (-35.517,12.911,102.643)
C3': (-36.769,11.308,100.586)
C1': (-36.318,9.364,101.911)
O4': (-35.166,10.168,101.887)
C5': (-34.737,12.493,101.522)
P: (-35.030,14.102,103.588)
O2: (-37.570,7.234,102.784)
C4': (-35.297,11.237,100.928)
C2': (-37.339,9.926,100.926)
O2': (-37.371,9.089,99.785)
N1: (-36.818,9.287,103.303)
N3: (-37.890,7.901,104.899)
N4: (-38.214,8.588,107.010)
C6: (-36.622,10.263,104.241)
C5: (-37.060,10.098,105.499)
O3': (-36.976,11.711,99.251)
OP1: (-34.816,15.343,102.769)
OP2: (-35.901,14.182,104.794)
C4: (-37.720,8.858,105.799)
O5': (-35.517,12.911,102.643)
C3': (-36.769,11.308,100.586)
C1': (-36.318,9.364,101.911)
O4': (-35.166,10.168,101.887)
C5': (-34.737,12.493,101.522)
P: (-35.030,14.102,103.588)
O2: (-37.570,7.234,102.784)
C4': (-35.297,11.237,100.928)
C2': (-37.339,9.926,100.926)
O2': (-37.371,9.089,99.785)
N1: (-36.818,9.287,103.303)
N3: (-37.890,7.901,104.899)
N4: (-38.214,8.588,107.010)
C6: (-36.622,10.263,104.241)
C5: (-37.060,10.098,105.499)
O3': (-36.976,11.711,99.251)
Image (generated by PyMOL):