Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VC0:B56:B55
Extra
PDB:
ATOM 1 O3' U A 55 52.895 54.181 84.105 1.00 89.38 O
ATOM 2 P C A 56 51.698 54.605 85.089 1.00 90.80 P
ATOM 3 OP1 C A 56 52.000 54.113 86.459 1.00 90.09 O
ATOM 4 OP2 C A 56 50.417 54.227 84.436 1.00 90.37 O
ATOM 5 O5' C A 56 51.814 56.191 85.087 1.00 89.81 O
ATOM 6 C5' C A 56 50.745 57.018 85.519 1.00 87.63 C
ATOM 7 C4' C A 56 50.572 58.164 84.556 1.00 85.42 C
ATOM 8 O4' C A 56 51.868 58.780 84.320 1.00 85.60 O
ATOM 9 C3' C A 56 50.095 57.765 83.172 1.00 83.98 C
ATOM 10 O3' C A 56 48.684 57.702 83.140 1.00 81.62 O
ATOM 11 C2' C A 56 50.621 58.888 82.290 1.00 84.19 C
ATOM 12 O2' C A 56 49.760 60.009 82.285 1.00 84.49 O
ATOM 13 C1' C A 56 51.944 59.235 82.977 1.00 84.21 C
ATOM 14 N1 C A 56 53.103 58.608 82.322 1.00 82.95 N
ATOM 15 C2 C A 56 53.547 59.138 81.105 1.00 82.39 C
ATOM 16 O2 C A 56 52.967 60.128 80.637 1.00 82.29 O
ATOM 17 N3 C A 56 54.592 58.558 80.467 1.00 81.43 N
ATOM 18 C4 C A 56 55.194 57.494 81.005 1.00 82.32 C
ATOM 19 N4 C A 56 56.219 56.951 80.338 1.00 80.40 N
ATOM 20 C5 C A 56 54.770 56.937 82.252 1.00 82.58 C
ATOM 21 C6 C A 56 53.728 57.523 82.871 1.00 82.72 C
ATOM 22 P C A 57 47.960 56.737 82.089 1.00 78.61 P
ATOM 23 OP1 C A 57 46.495 56.891 82.294 1.00 78.33 O
ATOM 24 OP2 C A 57 48.598 55.404 82.223 1.00 76.93 O
ATOM 25 O5' C A 57 48.334 57.359 80.672 1.00 75.09 O
TER
ATOM 1 O3' C B 54 54.484 49.409 87.497 1.00 62.39 O
ATOM 2 P U B 55 55.726 49.660 86.501 1.00 68.00 P
ATOM 3 OP1 U B 55 55.827 48.522 85.555 1.00 70.40 O
ATOM 4 OP2 U B 55 56.898 50.020 87.332 1.00 66.28 O
ATOM 5 O5' U B 55 55.278 50.951 85.686 1.00 72.64 O
ATOM 6 C5' U B 55 54.970 52.162 86.378 1.00 81.13 C
ATOM 7 C4' U B 55 54.696 53.281 85.400 1.00 85.84 C
ATOM 8 O4' U B 55 55.917 53.617 84.685 1.00 88.40 O
ATOM 9 C3' U B 55 53.626 52.994 84.349 1.00 87.38 C
ATOM 10 O3' U B 55 52.895 54.181 84.105 1.00 89.38 O
ATOM 11 C2' U B 55 54.439 52.684 83.096 1.00 89.16 C
ATOM 12 O2' U B 55 53.768 53.063 81.910 1.00 90.02 O
ATOM 13 C1' U B 55 55.678 53.561 83.292 1.00 90.50 C
ATOM 14 N1 U B 55 56.879 53.029 82.630 1.00 92.91 N
ATOM 15 C2 U B 55 57.582 53.886 81.798 1.00 93.73 C
ATOM 16 O2 U B 55 57.245 55.043 81.604 1.00 93.27 O
ATOM 17 N3 U B 55 58.689 53.337 81.199 1.00 94.34 N
ATOM 18 C4 U B 55 59.157 52.046 81.343 1.00 94.65 C
ATOM 19 O4 U B 55 60.173 51.698 80.735 1.00 94.91 O
ATOM 20 C5 U B 55 58.378 51.222 82.222 1.00 94.31 C
ATOM 21 C6 U B 55 57.295 51.729 82.821 1.00 93.28 C
ATOM 22 P C B 56 51.698 54.605 85.089 1.00 90.80 P
ATOM 23 OP1 C B 56 52.000 54.113 86.459 1.00 90.09 O
ATOM 24 OP2 C B 56 50.417 54.227 84.436 1.00 90.37 O
ATOM 25 O5' C B 56 51.814 56.191 85.087 1.00 89.81 O
TER
ATOM 2 P C A 56 51.698 54.605 85.089 1.00 90.80 P
ATOM 3 OP1 C A 56 52.000 54.113 86.459 1.00 90.09 O
ATOM 4 OP2 C A 56 50.417 54.227 84.436 1.00 90.37 O
ATOM 5 O5' C A 56 51.814 56.191 85.087 1.00 89.81 O
ATOM 6 C5' C A 56 50.745 57.018 85.519 1.00 87.63 C
ATOM 7 C4' C A 56 50.572 58.164 84.556 1.00 85.42 C
ATOM 8 O4' C A 56 51.868 58.780 84.320 1.00 85.60 O
ATOM 9 C3' C A 56 50.095 57.765 83.172 1.00 83.98 C
ATOM 10 O3' C A 56 48.684 57.702 83.140 1.00 81.62 O
ATOM 11 C2' C A 56 50.621 58.888 82.290 1.00 84.19 C
ATOM 12 O2' C A 56 49.760 60.009 82.285 1.00 84.49 O
ATOM 13 C1' C A 56 51.944 59.235 82.977 1.00 84.21 C
ATOM 14 N1 C A 56 53.103 58.608 82.322 1.00 82.95 N
ATOM 15 C2 C A 56 53.547 59.138 81.105 1.00 82.39 C
ATOM 16 O2 C A 56 52.967 60.128 80.637 1.00 82.29 O
ATOM 17 N3 C A 56 54.592 58.558 80.467 1.00 81.43 N
ATOM 18 C4 C A 56 55.194 57.494 81.005 1.00 82.32 C
ATOM 19 N4 C A 56 56.219 56.951 80.338 1.00 80.40 N
ATOM 20 C5 C A 56 54.770 56.937 82.252 1.00 82.58 C
ATOM 21 C6 C A 56 53.728 57.523 82.871 1.00 82.72 C
ATOM 22 P C A 57 47.960 56.737 82.089 1.00 78.61 P
ATOM 23 OP1 C A 57 46.495 56.891 82.294 1.00 78.33 O
ATOM 24 OP2 C A 57 48.598 55.404 82.223 1.00 76.93 O
ATOM 25 O5' C A 57 48.334 57.359 80.672 1.00 75.09 O
TER
ATOM 1 O3' C B 54 54.484 49.409 87.497 1.00 62.39 O
ATOM 2 P U B 55 55.726 49.660 86.501 1.00 68.00 P
ATOM 3 OP1 U B 55 55.827 48.522 85.555 1.00 70.40 O
ATOM 4 OP2 U B 55 56.898 50.020 87.332 1.00 66.28 O
ATOM 5 O5' U B 55 55.278 50.951 85.686 1.00 72.64 O
ATOM 6 C5' U B 55 54.970 52.162 86.378 1.00 81.13 C
ATOM 7 C4' U B 55 54.696 53.281 85.400 1.00 85.84 C
ATOM 8 O4' U B 55 55.917 53.617 84.685 1.00 88.40 O
ATOM 9 C3' U B 55 53.626 52.994 84.349 1.00 87.38 C
ATOM 10 O3' U B 55 52.895 54.181 84.105 1.00 89.38 O
ATOM 11 C2' U B 55 54.439 52.684 83.096 1.00 89.16 C
ATOM 12 O2' U B 55 53.768 53.063 81.910 1.00 90.02 O
ATOM 13 C1' U B 55 55.678 53.561 83.292 1.00 90.50 C
ATOM 14 N1 U B 55 56.879 53.029 82.630 1.00 92.91 N
ATOM 15 C2 U B 55 57.582 53.886 81.798 1.00 93.73 C
ATOM 16 O2 U B 55 57.245 55.043 81.604 1.00 93.27 O
ATOM 17 N3 U B 55 58.689 53.337 81.199 1.00 94.34 N
ATOM 18 C4 U B 55 59.157 52.046 81.343 1.00 94.65 C
ATOM 19 O4 U B 55 60.173 51.698 80.735 1.00 94.91 O
ATOM 20 C5 U B 55 58.378 51.222 82.222 1.00 94.31 C
ATOM 21 C6 U B 55 57.295 51.729 82.821 1.00 93.28 C
ATOM 22 P C B 56 51.698 54.605 85.089 1.00 90.80 P
ATOM 23 OP1 C B 56 52.000 54.113 86.459 1.00 90.09 O
ATOM 24 OP2 C B 56 50.417 54.227 84.436 1.00 90.37 O
ATOM 25 O5' C B 56 51.814 56.191 85.087 1.00 89.81 O
TER
Atoms:
C2: (53.547,59.138,81.105)
OP1: (52.000,54.113,86.459)
OP2: (50.417,54.227,84.436)
C4: (55.194,57.494,81.005)
O5': (51.814,56.191,85.087)
C3': (50.095,57.765,83.172)
C1': (51.944,59.235,82.977)
O4': (51.868,58.780,84.320)
C5': (50.745,57.018,85.519)
P: (51.698,54.605,85.089)
O2: (52.967,60.128,80.637)
C4': (50.572,58.164,84.556)
C2': (50.621,58.888,82.290)
O2': (49.760,60.009,82.285)
N1: (53.103,58.608,82.322)
N3: (54.592,58.558,80.467)
N4: (56.219,56.951,80.338)
C6: (53.728,57.523,82.871)
C5: (54.770,56.937,82.252)
O3': (48.684,57.702,83.140)
OP1: (52.000,54.113,86.459)
OP2: (50.417,54.227,84.436)
C4: (55.194,57.494,81.005)
O5': (51.814,56.191,85.087)
C3': (50.095,57.765,83.172)
C1': (51.944,59.235,82.977)
O4': (51.868,58.780,84.320)
C5': (50.745,57.018,85.519)
P: (51.698,54.605,85.089)
O2: (52.967,60.128,80.637)
C4': (50.572,58.164,84.556)
C2': (50.621,58.888,82.290)
O2': (49.760,60.009,82.285)
N1: (53.103,58.608,82.322)
N3: (54.592,58.558,80.467)
N4: (56.219,56.951,80.338)
C6: (53.728,57.523,82.871)
C5: (54.770,56.937,82.252)
O3': (48.684,57.702,83.140)
C4: (59.157,52.046,81.343)
N3: (58.689,53.337,81.199)
OP1: (55.827,48.522,85.555)
OP2: (56.898,50.020,87.332)
C2: (57.582,53.886,81.798)
C1': (55.678,53.561,83.292)
C3': (53.626,52.994,84.349)
O5': (55.278,50.951,85.686)
O4': (55.917,53.617,84.685)
C5': (54.970,52.162,86.378)
P: (55.726,49.660,86.501)
C4': (54.696,53.281,85.400)
C2': (54.439,52.684,83.096)
O2': (53.768,53.063,81.910)
N1: (56.879,53.029,82.630)
O4: (60.173,51.698,80.735)
O2: (57.245,55.043,81.604)
C6: (57.295,51.729,82.821)
C5: (58.378,51.222,82.222)
O3': (52.895,54.181,84.105)
N3: (58.689,53.337,81.199)
OP1: (55.827,48.522,85.555)
OP2: (56.898,50.020,87.332)
C2: (57.582,53.886,81.798)
C1': (55.678,53.561,83.292)
C3': (53.626,52.994,84.349)
O5': (55.278,50.951,85.686)
O4': (55.917,53.617,84.685)
C5': (54.970,52.162,86.378)
P: (55.726,49.660,86.501)
C4': (54.696,53.281,85.400)
C2': (54.439,52.684,83.096)
O2': (53.768,53.063,81.910)
N1: (56.879,53.029,82.630)
O4: (60.173,51.698,80.735)
O2: (57.245,55.043,81.604)
C6: (57.295,51.729,82.821)
C5: (58.378,51.222,82.222)
O3': (52.895,54.181,84.105)
Image (generated by PyMOL):