Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0969:0968
Extra
PDB:
ATOM 1 O3' U A 968 61.694 57.533 110.261 1.00 45.01 O
ATOM 2 P C A 969 61.650 56.085 109.573 1.00 47.42 P
ATOM 3 OP1 C A 969 63.040 55.571 109.515 1.00 44.91 O
ATOM 4 OP2 C A 969 60.854 56.181 108.322 1.00 47.09 O
ATOM 5 O5' C A 969 60.812 55.236 110.631 1.00 47.30 O
ATOM 6 C5' C A 969 61.058 53.835 110.838 1.00 46.74 C
ATOM 7 C4' C A 969 60.150 53.306 111.926 1.00 48.12 C
ATOM 8 O4' C A 969 60.457 53.956 113.195 1.00 48.39 O
ATOM 9 C3' C A 969 58.672 53.606 111.741 1.00 47.76 C
ATOM 10 O3' C A 969 58.017 52.770 110.809 1.00 47.07 O
ATOM 11 C2' C A 969 58.138 53.457 113.156 1.00 47.16 C
ATOM 12 O2' C A 969 57.987 52.114 113.565 1.00 47.38 O
ATOM 13 C1' C A 969 59.259 54.121 113.949 1.00 47.98 C
ATOM 14 N1 C A 969 58.974 55.562 114.100 1.00 49.45 N
ATOM 15 C2 C A 969 58.150 55.970 115.152 1.00 49.46 C
ATOM 16 O2 C A 969 57.722 55.116 115.942 1.00 52.41 O
ATOM 17 N3 C A 969 57.838 57.279 115.283 1.00 48.61 N
ATOM 18 C4 C A 969 58.317 58.167 114.414 1.00 48.29 C
ATOM 19 N4 C A 969 57.967 59.444 114.574 1.00 48.86 N
ATOM 20 C5 C A 969 59.174 57.785 113.341 1.00 48.66 C
ATOM 21 C6 C A 969 59.477 56.486 113.223 1.00 48.73 C
ATOM 22 P C A 970 56.749 53.342 110.014 1.00 47.89 P
ATOM 23 OP1 C A 970 55.876 52.192 109.671 1.00 48.89 O
ATOM 24 OP2 C A 970 57.258 54.235 108.927 1.00 45.33 O
ATOM 25 O5' C A 970 55.998 54.200 111.128 1.00 44.42 O
TER
ATOM 1 O3' C B 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 2 P U B 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 3 OP1 U B 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 4 OP2 U B 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 5 O5' U B 968 63.728 61.067 108.606 1.00 40.59 O
ATOM 6 C5' U B 968 64.339 59.901 109.184 1.00 42.09 C
ATOM 7 C4' U B 968 63.376 59.227 110.137 1.00 43.87 C
ATOM 8 O4' U B 968 62.931 60.192 111.135 1.00 44.72 O
ATOM 9 C3' U B 968 62.105 58.664 109.510 1.00 44.05 C
ATOM 10 O3' U B 968 61.694 57.533 110.261 1.00 45.01 O
ATOM 11 C2' U B 968 61.101 59.792 109.712 1.00 43.41 C
ATOM 12 O2' U B 968 59.763 59.340 109.753 1.00 41.68 O
ATOM 13 C1' U B 968 61.524 60.327 111.077 1.00 44.33 C
ATOM 14 N1 U B 968 61.184 61.742 111.285 1.00 46.25 N
ATOM 15 C2 U B 968 60.141 62.042 112.148 1.00 47.27 C
ATOM 16 O2 U B 968 59.483 61.190 112.720 1.00 46.41 O
ATOM 17 N3 U B 968 59.894 63.382 112.314 1.00 48.31 N
ATOM 18 C4 U B 968 60.563 64.432 111.715 1.00 47.84 C
ATOM 19 O4 U B 968 60.236 65.591 111.977 1.00 47.37 O
ATOM 20 C5 U B 968 61.614 64.040 110.830 1.00 48.48 C
ATOM 21 C6 U B 968 61.881 62.743 110.648 1.00 47.76 C
ATOM 22 P C B 969 61.650 56.085 109.573 1.00 47.42 P
ATOM 23 OP1 C B 969 63.040 55.571 109.515 1.00 44.91 O
ATOM 24 OP2 C B 969 60.854 56.181 108.322 1.00 47.09 O
ATOM 25 O5' C B 969 60.812 55.236 110.631 1.00 47.30 O
TER
ATOM 2 P C A 969 61.650 56.085 109.573 1.00 47.42 P
ATOM 3 OP1 C A 969 63.040 55.571 109.515 1.00 44.91 O
ATOM 4 OP2 C A 969 60.854 56.181 108.322 1.00 47.09 O
ATOM 5 O5' C A 969 60.812 55.236 110.631 1.00 47.30 O
ATOM 6 C5' C A 969 61.058 53.835 110.838 1.00 46.74 C
ATOM 7 C4' C A 969 60.150 53.306 111.926 1.00 48.12 C
ATOM 8 O4' C A 969 60.457 53.956 113.195 1.00 48.39 O
ATOM 9 C3' C A 969 58.672 53.606 111.741 1.00 47.76 C
ATOM 10 O3' C A 969 58.017 52.770 110.809 1.00 47.07 O
ATOM 11 C2' C A 969 58.138 53.457 113.156 1.00 47.16 C
ATOM 12 O2' C A 969 57.987 52.114 113.565 1.00 47.38 O
ATOM 13 C1' C A 969 59.259 54.121 113.949 1.00 47.98 C
ATOM 14 N1 C A 969 58.974 55.562 114.100 1.00 49.45 N
ATOM 15 C2 C A 969 58.150 55.970 115.152 1.00 49.46 C
ATOM 16 O2 C A 969 57.722 55.116 115.942 1.00 52.41 O
ATOM 17 N3 C A 969 57.838 57.279 115.283 1.00 48.61 N
ATOM 18 C4 C A 969 58.317 58.167 114.414 1.00 48.29 C
ATOM 19 N4 C A 969 57.967 59.444 114.574 1.00 48.86 N
ATOM 20 C5 C A 969 59.174 57.785 113.341 1.00 48.66 C
ATOM 21 C6 C A 969 59.477 56.486 113.223 1.00 48.73 C
ATOM 22 P C A 970 56.749 53.342 110.014 1.00 47.89 P
ATOM 23 OP1 C A 970 55.876 52.192 109.671 1.00 48.89 O
ATOM 24 OP2 C A 970 57.258 54.235 108.927 1.00 45.33 O
ATOM 25 O5' C A 970 55.998 54.200 111.128 1.00 44.42 O
TER
ATOM 1 O3' C B 967 65.637 62.699 108.101 1.00 38.46 O
ATOM 2 P U B 968 64.421 61.869 107.416 1.00 40.47 P
ATOM 3 OP1 U B 968 65.012 60.888 106.463 1.00 37.50 O
ATOM 4 OP2 U B 968 63.404 62.838 106.923 1.00 41.65 O
ATOM 5 O5' U B 968 63.728 61.067 108.606 1.00 40.59 O
ATOM 6 C5' U B 968 64.339 59.901 109.184 1.00 42.09 C
ATOM 7 C4' U B 968 63.376 59.227 110.137 1.00 43.87 C
ATOM 8 O4' U B 968 62.931 60.192 111.135 1.00 44.72 O
ATOM 9 C3' U B 968 62.105 58.664 109.510 1.00 44.05 C
ATOM 10 O3' U B 968 61.694 57.533 110.261 1.00 45.01 O
ATOM 11 C2' U B 968 61.101 59.792 109.712 1.00 43.41 C
ATOM 12 O2' U B 968 59.763 59.340 109.753 1.00 41.68 O
ATOM 13 C1' U B 968 61.524 60.327 111.077 1.00 44.33 C
ATOM 14 N1 U B 968 61.184 61.742 111.285 1.00 46.25 N
ATOM 15 C2 U B 968 60.141 62.042 112.148 1.00 47.27 C
ATOM 16 O2 U B 968 59.483 61.190 112.720 1.00 46.41 O
ATOM 17 N3 U B 968 59.894 63.382 112.314 1.00 48.31 N
ATOM 18 C4 U B 968 60.563 64.432 111.715 1.00 47.84 C
ATOM 19 O4 U B 968 60.236 65.591 111.977 1.00 47.37 O
ATOM 20 C5 U B 968 61.614 64.040 110.830 1.00 48.48 C
ATOM 21 C6 U B 968 61.881 62.743 110.648 1.00 47.76 C
ATOM 22 P C B 969 61.650 56.085 109.573 1.00 47.42 P
ATOM 23 OP1 C B 969 63.040 55.571 109.515 1.00 44.91 O
ATOM 24 OP2 C B 969 60.854 56.181 108.322 1.00 47.09 O
ATOM 25 O5' C B 969 60.812 55.236 110.631 1.00 47.30 O
TER
Atoms:
C2: (58.150,55.970,115.152)
OP1: (63.040,55.571,109.515)
OP2: (60.854,56.181,108.322)
C4: (58.317,58.167,114.414)
O5': (60.812,55.236,110.631)
C3': (58.672,53.606,111.741)
C1': (59.259,54.121,113.949)
O4': (60.457,53.956,113.195)
C5': (61.058,53.835,110.838)
P: (61.650,56.085,109.573)
O2: (57.722,55.116,115.942)
C4': (60.150,53.306,111.926)
C2': (58.138,53.457,113.156)
O2': (57.987,52.114,113.565)
N1: (58.974,55.562,114.100)
N3: (57.838,57.279,115.283)
N4: (57.967,59.444,114.574)
C6: (59.477,56.486,113.223)
C5: (59.174,57.785,113.341)
O3': (58.017,52.770,110.809)
OP1: (63.040,55.571,109.515)
OP2: (60.854,56.181,108.322)
C4: (58.317,58.167,114.414)
O5': (60.812,55.236,110.631)
C3': (58.672,53.606,111.741)
C1': (59.259,54.121,113.949)
O4': (60.457,53.956,113.195)
C5': (61.058,53.835,110.838)
P: (61.650,56.085,109.573)
O2: (57.722,55.116,115.942)
C4': (60.150,53.306,111.926)
C2': (58.138,53.457,113.156)
O2': (57.987,52.114,113.565)
N1: (58.974,55.562,114.100)
N3: (57.838,57.279,115.283)
N4: (57.967,59.444,114.574)
C6: (59.477,56.486,113.223)
C5: (59.174,57.785,113.341)
O3': (58.017,52.770,110.809)
C4: (60.563,64.432,111.715)
N3: (59.894,63.382,112.314)
OP1: (65.012,60.888,106.463)
OP2: (63.404,62.838,106.923)
C2: (60.141,62.042,112.148)
C1': (61.524,60.327,111.077)
C3': (62.105,58.664,109.510)
O5': (63.728,61.067,108.606)
O4': (62.931,60.192,111.135)
C5': (64.339,59.901,109.184)
P: (64.421,61.869,107.416)
C4': (63.376,59.227,110.137)
C2': (61.101,59.792,109.712)
O2': (59.763,59.340,109.753)
N1: (61.184,61.742,111.285)
O4: (60.236,65.591,111.977)
O2: (59.483,61.190,112.720)
C6: (61.881,62.743,110.648)
C5: (61.614,64.040,110.830)
O3': (61.694,57.533,110.261)
N3: (59.894,63.382,112.314)
OP1: (65.012,60.888,106.463)
OP2: (63.404,62.838,106.923)
C2: (60.141,62.042,112.148)
C1': (61.524,60.327,111.077)
C3': (62.105,58.664,109.510)
O5': (63.728,61.067,108.606)
O4': (62.931,60.192,111.135)
C5': (64.339,59.901,109.184)
P: (64.421,61.869,107.416)
C4': (63.376,59.227,110.137)
C2': (61.101,59.792,109.712)
O2': (59.763,59.340,109.753)
N1: (61.184,61.742,111.285)
O4: (60.236,65.591,111.977)
O2: (59.483,61.190,112.720)
C6: (61.881,62.743,110.648)
C5: (61.614,64.040,110.830)
O3': (61.694,57.533,110.261)
Image (generated by PyMOL):