Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0969:0968
Extra
PDB:
ATOM 1 O3' U A 968 61.725 57.372 110.135 1.00 46.90 O
ATOM 2 P C A 969 61.665 55.921 109.448 1.00 49.34 P
ATOM 3 OP1 C A 969 63.047 55.379 109.402 1.00 46.87 O
ATOM 4 OP2 C A 969 60.881 56.023 108.190 1.00 49.90 O
ATOM 5 O5' C A 969 60.802 55.087 110.498 1.00 48.51 O
ATOM 6 C5' C A 969 61.040 53.687 110.719 1.00 49.51 C
ATOM 7 C4' C A 969 60.112 53.158 111.791 1.00 50.04 C
ATOM 8 O4' C A 969 60.408 53.784 113.074 1.00 50.11 O
ATOM 9 C3' C A 969 58.641 53.470 111.594 1.00 49.97 C
ATOM 10 O3' C A 969 57.988 52.651 110.646 1.00 49.67 O
ATOM 11 C2' C A 969 58.092 53.292 112.998 1.00 49.60 C
ATOM 12 O2' C A 969 57.942 51.939 113.363 1.00 50.26 O
ATOM 13 C1' C A 969 59.203 53.940 113.819 1.00 49.50 C
ATOM 14 N1 C A 969 58.922 55.380 113.977 1.00 50.76 N
ATOM 15 C2 C A 969 58.072 55.791 115.011 1.00 50.75 C
ATOM 16 O2 C A 969 57.608 54.940 115.781 1.00 53.00 O
ATOM 17 N3 C A 969 57.775 57.103 115.140 1.00 50.05 N
ATOM 18 C4 C A 969 58.292 57.990 114.291 1.00 49.62 C
ATOM 19 N4 C A 969 57.966 59.271 114.450 1.00 50.04 N
ATOM 20 C5 C A 969 59.168 57.604 113.239 1.00 50.77 C
ATOM 21 C6 C A 969 59.457 56.303 113.121 1.00 51.25 C
ATOM 22 P C A 970 56.728 53.243 109.850 1.00 51.31 P
ATOM 23 OP1 C A 970 55.858 52.107 109.449 1.00 51.99 O
ATOM 24 OP2 C A 970 57.253 54.179 108.806 1.00 50.10 O
ATOM 25 O5' C A 970 55.951 54.064 110.973 1.00 45.77 O
TER
ATOM 1 O3' C B 967 65.644 62.523 107.919 1.00 37.05 O
ATOM 2 P U B 968 64.433 61.694 107.234 1.00 37.82 P
ATOM 3 OP1 U B 968 65.029 60.712 106.302 1.00 36.93 O
ATOM 4 OP2 U B 968 63.426 62.658 106.725 1.00 40.22 O
ATOM 5 O5' U B 968 63.730 60.903 108.425 1.00 38.49 O
ATOM 6 C5' U B 968 64.353 59.765 109.041 1.00 41.10 C
ATOM 7 C4' U B 968 63.388 59.092 109.993 1.00 43.71 C
ATOM 8 O4' U B 968 62.940 60.064 110.980 1.00 44.98 O
ATOM 9 C3' U B 968 62.120 58.506 109.377 1.00 44.49 C
ATOM 10 O3' U B 968 61.725 57.372 110.135 1.00 46.90 O
ATOM 11 C2' U B 968 61.099 59.620 109.587 1.00 44.68 C
ATOM 12 O2' U B 968 59.771 59.143 109.662 1.00 43.13 O
ATOM 13 C1' U B 968 61.530 60.171 110.941 1.00 45.29 C
ATOM 14 N1 U B 968 61.164 61.579 111.157 1.00 47.09 N
ATOM 15 C2 U B 968 60.107 61.852 112.013 1.00 48.74 C
ATOM 16 O2 U B 968 59.449 60.983 112.558 1.00 48.65 O
ATOM 17 N3 U B 968 59.847 63.188 112.203 1.00 50.15 N
ATOM 18 C4 U B 968 60.510 64.255 111.628 1.00 49.71 C
ATOM 19 O4 U B 968 60.169 65.407 111.907 1.00 49.41 O
ATOM 20 C5 U B 968 61.570 63.888 110.742 1.00 49.08 C
ATOM 21 C6 U B 968 61.852 62.597 110.541 1.00 47.62 C
ATOM 22 P C B 969 61.665 55.921 109.448 1.00 49.34 P
ATOM 23 OP1 C B 969 63.047 55.379 109.402 1.00 46.87 O
ATOM 24 OP2 C B 969 60.881 56.023 108.190 1.00 49.90 O
ATOM 25 O5' C B 969 60.802 55.087 110.498 1.00 48.51 O
TER
ATOM 2 P C A 969 61.665 55.921 109.448 1.00 49.34 P
ATOM 3 OP1 C A 969 63.047 55.379 109.402 1.00 46.87 O
ATOM 4 OP2 C A 969 60.881 56.023 108.190 1.00 49.90 O
ATOM 5 O5' C A 969 60.802 55.087 110.498 1.00 48.51 O
ATOM 6 C5' C A 969 61.040 53.687 110.719 1.00 49.51 C
ATOM 7 C4' C A 969 60.112 53.158 111.791 1.00 50.04 C
ATOM 8 O4' C A 969 60.408 53.784 113.074 1.00 50.11 O
ATOM 9 C3' C A 969 58.641 53.470 111.594 1.00 49.97 C
ATOM 10 O3' C A 969 57.988 52.651 110.646 1.00 49.67 O
ATOM 11 C2' C A 969 58.092 53.292 112.998 1.00 49.60 C
ATOM 12 O2' C A 969 57.942 51.939 113.363 1.00 50.26 O
ATOM 13 C1' C A 969 59.203 53.940 113.819 1.00 49.50 C
ATOM 14 N1 C A 969 58.922 55.380 113.977 1.00 50.76 N
ATOM 15 C2 C A 969 58.072 55.791 115.011 1.00 50.75 C
ATOM 16 O2 C A 969 57.608 54.940 115.781 1.00 53.00 O
ATOM 17 N3 C A 969 57.775 57.103 115.140 1.00 50.05 N
ATOM 18 C4 C A 969 58.292 57.990 114.291 1.00 49.62 C
ATOM 19 N4 C A 969 57.966 59.271 114.450 1.00 50.04 N
ATOM 20 C5 C A 969 59.168 57.604 113.239 1.00 50.77 C
ATOM 21 C6 C A 969 59.457 56.303 113.121 1.00 51.25 C
ATOM 22 P C A 970 56.728 53.243 109.850 1.00 51.31 P
ATOM 23 OP1 C A 970 55.858 52.107 109.449 1.00 51.99 O
ATOM 24 OP2 C A 970 57.253 54.179 108.806 1.00 50.10 O
ATOM 25 O5' C A 970 55.951 54.064 110.973 1.00 45.77 O
TER
ATOM 1 O3' C B 967 65.644 62.523 107.919 1.00 37.05 O
ATOM 2 P U B 968 64.433 61.694 107.234 1.00 37.82 P
ATOM 3 OP1 U B 968 65.029 60.712 106.302 1.00 36.93 O
ATOM 4 OP2 U B 968 63.426 62.658 106.725 1.00 40.22 O
ATOM 5 O5' U B 968 63.730 60.903 108.425 1.00 38.49 O
ATOM 6 C5' U B 968 64.353 59.765 109.041 1.00 41.10 C
ATOM 7 C4' U B 968 63.388 59.092 109.993 1.00 43.71 C
ATOM 8 O4' U B 968 62.940 60.064 110.980 1.00 44.98 O
ATOM 9 C3' U B 968 62.120 58.506 109.377 1.00 44.49 C
ATOM 10 O3' U B 968 61.725 57.372 110.135 1.00 46.90 O
ATOM 11 C2' U B 968 61.099 59.620 109.587 1.00 44.68 C
ATOM 12 O2' U B 968 59.771 59.143 109.662 1.00 43.13 O
ATOM 13 C1' U B 968 61.530 60.171 110.941 1.00 45.29 C
ATOM 14 N1 U B 968 61.164 61.579 111.157 1.00 47.09 N
ATOM 15 C2 U B 968 60.107 61.852 112.013 1.00 48.74 C
ATOM 16 O2 U B 968 59.449 60.983 112.558 1.00 48.65 O
ATOM 17 N3 U B 968 59.847 63.188 112.203 1.00 50.15 N
ATOM 18 C4 U B 968 60.510 64.255 111.628 1.00 49.71 C
ATOM 19 O4 U B 968 60.169 65.407 111.907 1.00 49.41 O
ATOM 20 C5 U B 968 61.570 63.888 110.742 1.00 49.08 C
ATOM 21 C6 U B 968 61.852 62.597 110.541 1.00 47.62 C
ATOM 22 P C B 969 61.665 55.921 109.448 1.00 49.34 P
ATOM 23 OP1 C B 969 63.047 55.379 109.402 1.00 46.87 O
ATOM 24 OP2 C B 969 60.881 56.023 108.190 1.00 49.90 O
ATOM 25 O5' C B 969 60.802 55.087 110.498 1.00 48.51 O
TER
Atoms:
C2: (58.072,55.791,115.011)
OP1: (63.047,55.379,109.402)
OP2: (60.881,56.023,108.190)
C4: (58.292,57.990,114.291)
O5': (60.802,55.087,110.498)
C3': (58.641,53.470,111.594)
C1': (59.203,53.940,113.819)
O4': (60.408,53.784,113.074)
C5': (61.040,53.687,110.719)
P: (61.665,55.921,109.448)
O2: (57.608,54.940,115.781)
C4': (60.112,53.158,111.791)
C2': (58.092,53.292,112.998)
O2': (57.942,51.939,113.363)
N1: (58.922,55.380,113.977)
N3: (57.775,57.103,115.140)
N4: (57.966,59.271,114.450)
C6: (59.457,56.303,113.121)
C5: (59.168,57.604,113.239)
O3': (57.988,52.651,110.646)
OP1: (63.047,55.379,109.402)
OP2: (60.881,56.023,108.190)
C4: (58.292,57.990,114.291)
O5': (60.802,55.087,110.498)
C3': (58.641,53.470,111.594)
C1': (59.203,53.940,113.819)
O4': (60.408,53.784,113.074)
C5': (61.040,53.687,110.719)
P: (61.665,55.921,109.448)
O2: (57.608,54.940,115.781)
C4': (60.112,53.158,111.791)
C2': (58.092,53.292,112.998)
O2': (57.942,51.939,113.363)
N1: (58.922,55.380,113.977)
N3: (57.775,57.103,115.140)
N4: (57.966,59.271,114.450)
C6: (59.457,56.303,113.121)
C5: (59.168,57.604,113.239)
O3': (57.988,52.651,110.646)
C4: (60.510,64.255,111.628)
N3: (59.847,63.188,112.203)
OP1: (65.029,60.712,106.302)
OP2: (63.426,62.658,106.725)
C2: (60.107,61.852,112.013)
C1': (61.530,60.171,110.941)
C3': (62.120,58.506,109.377)
O5': (63.730,60.903,108.425)
O4': (62.940,60.064,110.980)
C5': (64.353,59.765,109.041)
P: (64.433,61.694,107.234)
C4': (63.388,59.092,109.993)
C2': (61.099,59.620,109.587)
O2': (59.771,59.143,109.662)
N1: (61.164,61.579,111.157)
O4: (60.169,65.407,111.907)
O2: (59.449,60.983,112.558)
C6: (61.852,62.597,110.541)
C5: (61.570,63.888,110.742)
O3': (61.725,57.372,110.135)
N3: (59.847,63.188,112.203)
OP1: (65.029,60.712,106.302)
OP2: (63.426,62.658,106.725)
C2: (60.107,61.852,112.013)
C1': (61.530,60.171,110.941)
C3': (62.120,58.506,109.377)
O5': (63.730,60.903,108.425)
O4': (62.940,60.064,110.980)
C5': (64.353,59.765,109.041)
P: (64.433,61.694,107.234)
C4': (63.388,59.092,109.993)
C2': (61.099,59.620,109.587)
O2': (59.771,59.143,109.662)
N1: (61.164,61.579,111.157)
O4: (60.169,65.407,111.907)
O2: (59.449,60.983,112.558)
C6: (61.852,62.597,110.541)
C5: (61.570,63.888,110.742)
O3': (61.725,57.372,110.135)
Image (generated by PyMOL):