Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0969:0968
Extra
PDB:
ATOM 1 O3' U A 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 2 P C A 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 3 OP1 C A 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 4 OP2 C A 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 5 O5' C A 969 61.033 55.346 110.942 1.00 50.42 O
ATOM 6 C5' C A 969 61.334 53.977 111.219 1.00 50.83 C
ATOM 7 C4' C A 969 60.406 53.449 112.288 1.00 51.67 C
ATOM 8 O4' C A 969 60.666 54.100 113.568 1.00 51.76 O
ATOM 9 C3' C A 969 58.936 53.733 112.066 1.00 50.96 C
ATOM 10 O3' C A 969 58.323 52.922 111.080 1.00 50.86 O
ATOM 11 C2' C A 969 58.372 53.533 113.462 1.00 51.30 C
ATOM 12 O2' C A 969 58.267 52.171 113.823 1.00 51.60 O
ATOM 13 C1' C A 969 59.451 54.213 114.303 1.00 50.74 C
ATOM 14 N1 C A 969 59.132 55.644 114.483 1.00 52.98 N
ATOM 15 C2 C A 969 58.250 56.021 115.512 1.00 54.50 C
ATOM 16 O2 C A 969 57.778 55.143 116.257 1.00 57.19 O
ATOM 17 N3 C A 969 57.931 57.333 115.663 1.00 52.84 N
ATOM 18 C4 C A 969 58.449 58.245 114.837 1.00 52.43 C
ATOM 19 N4 C A 969 58.100 59.520 115.012 1.00 51.83 N
ATOM 20 C5 C A 969 59.348 57.891 113.791 1.00 52.94 C
ATOM 21 C6 C A 969 59.664 56.595 113.653 1.00 53.71 C
ATOM 22 P C A 970 57.106 53.530 110.228 1.00 52.98 P
ATOM 23 OP1 C A 970 56.208 52.430 109.803 1.00 53.83 O
ATOM 24 OP2 C A 970 57.698 54.437 109.196 1.00 51.23 O
ATOM 25 O5' C A 970 56.313 54.370 111.331 1.00 50.00 O
TER
ATOM 1 O3' C B 967 65.814 62.804 108.339 1.00 40.61 O
ATOM 2 P U B 968 64.586 61.986 107.664 1.00 42.48 P
ATOM 3 OP1 U B 968 65.160 60.988 106.731 1.00 37.36 O
ATOM 4 OP2 U B 968 63.601 62.974 107.157 1.00 43.47 O
ATOM 5 O5' U B 968 63.876 61.205 108.859 1.00 41.86 O
ATOM 6 C5' U B 968 64.481 60.045 109.455 1.00 44.42 C
ATOM 7 C4' U B 968 63.514 59.364 110.399 1.00 45.51 C
ATOM 8 O4' U B 968 63.073 60.323 111.396 1.00 46.48 O
ATOM 9 C3' U B 968 62.244 58.782 109.786 1.00 46.94 C
ATOM 10 O3' U B 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 11 C2' U B 968 61.221 59.892 110.015 1.00 46.51 C
ATOM 12 O2' U B 968 59.900 59.391 110.103 1.00 43.21 O
ATOM 13 C1' U B 968 61.664 60.439 111.369 1.00 46.96 C
ATOM 14 N1 U B 968 61.314 61.851 111.594 1.00 49.59 N
ATOM 15 C2 U B 968 60.209 62.143 112.397 1.00 52.00 C
ATOM 16 O2 U B 968 59.509 61.286 112.920 1.00 52.73 O
ATOM 17 N3 U B 968 59.959 63.484 112.569 1.00 52.32 N
ATOM 18 C4 U B 968 60.682 64.540 112.044 1.00 52.01 C
ATOM 19 O4 U B 968 60.339 65.702 112.293 1.00 50.59 O
ATOM 20 C5 U B 968 61.797 64.152 111.233 1.00 51.77 C
ATOM 21 C6 U B 968 62.063 62.858 111.037 1.00 49.68 C
ATOM 22 P C B 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 23 OP1 C B 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 24 OP2 C B 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 25 O5' C B 969 61.033 55.346 110.942 1.00 50.42 O
TER
ATOM 2 P C A 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 3 OP1 C A 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 4 OP2 C A 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 5 O5' C A 969 61.033 55.346 110.942 1.00 50.42 O
ATOM 6 C5' C A 969 61.334 53.977 111.219 1.00 50.83 C
ATOM 7 C4' C A 969 60.406 53.449 112.288 1.00 51.67 C
ATOM 8 O4' C A 969 60.666 54.100 113.568 1.00 51.76 O
ATOM 9 C3' C A 969 58.936 53.733 112.066 1.00 50.96 C
ATOM 10 O3' C A 969 58.323 52.922 111.080 1.00 50.86 O
ATOM 11 C2' C A 969 58.372 53.533 113.462 1.00 51.30 C
ATOM 12 O2' C A 969 58.267 52.171 113.823 1.00 51.60 O
ATOM 13 C1' C A 969 59.451 54.213 114.303 1.00 50.74 C
ATOM 14 N1 C A 969 59.132 55.644 114.483 1.00 52.98 N
ATOM 15 C2 C A 969 58.250 56.021 115.512 1.00 54.50 C
ATOM 16 O2 C A 969 57.778 55.143 116.257 1.00 57.19 O
ATOM 17 N3 C A 969 57.931 57.333 115.663 1.00 52.84 N
ATOM 18 C4 C A 969 58.449 58.245 114.837 1.00 52.43 C
ATOM 19 N4 C A 969 58.100 59.520 115.012 1.00 51.83 N
ATOM 20 C5 C A 969 59.348 57.891 113.791 1.00 52.94 C
ATOM 21 C6 C A 969 59.664 56.595 113.653 1.00 53.71 C
ATOM 22 P C A 970 57.106 53.530 110.228 1.00 52.98 P
ATOM 23 OP1 C A 970 56.208 52.430 109.803 1.00 53.83 O
ATOM 24 OP2 C A 970 57.698 54.437 109.196 1.00 51.23 O
ATOM 25 O5' C A 970 56.313 54.370 111.331 1.00 50.00 O
TER
ATOM 1 O3' C B 967 65.814 62.804 108.339 1.00 40.61 O
ATOM 2 P U B 968 64.586 61.986 107.664 1.00 42.48 P
ATOM 3 OP1 U B 968 65.160 60.988 106.731 1.00 37.36 O
ATOM 4 OP2 U B 968 63.601 62.974 107.157 1.00 43.47 O
ATOM 5 O5' U B 968 63.876 61.205 108.859 1.00 41.86 O
ATOM 6 C5' U B 968 64.481 60.045 109.455 1.00 44.42 C
ATOM 7 C4' U B 968 63.514 59.364 110.399 1.00 45.51 C
ATOM 8 O4' U B 968 63.073 60.323 111.396 1.00 46.48 O
ATOM 9 C3' U B 968 62.244 58.782 109.786 1.00 46.94 C
ATOM 10 O3' U B 968 61.859 57.641 110.540 1.00 48.85 O
ATOM 11 C2' U B 968 61.221 59.892 110.015 1.00 46.51 C
ATOM 12 O2' U B 968 59.900 59.391 110.103 1.00 43.21 O
ATOM 13 C1' U B 968 61.664 60.439 111.369 1.00 46.96 C
ATOM 14 N1 U B 968 61.314 61.851 111.594 1.00 49.59 N
ATOM 15 C2 U B 968 60.209 62.143 112.397 1.00 52.00 C
ATOM 16 O2 U B 968 59.509 61.286 112.920 1.00 52.73 O
ATOM 17 N3 U B 968 59.959 63.484 112.569 1.00 52.32 N
ATOM 18 C4 U B 968 60.682 64.540 112.044 1.00 52.01 C
ATOM 19 O4 U B 968 60.339 65.702 112.293 1.00 50.59 O
ATOM 20 C5 U B 968 61.797 64.152 111.233 1.00 51.77 C
ATOM 21 C6 U B 968 62.063 62.858 111.037 1.00 49.68 C
ATOM 22 P C B 969 61.856 56.182 109.867 1.00 51.33 P
ATOM 23 OP1 C B 969 63.261 55.706 109.841 1.00 50.44 O
ATOM 24 OP2 C B 969 61.070 56.198 108.604 1.00 49.58 O
ATOM 25 O5' C B 969 61.033 55.346 110.942 1.00 50.42 O
TER
Atoms:
C2: (58.250,56.021,115.512)
OP1: (63.261,55.706,109.841)
OP2: (61.070,56.198,108.604)
C4: (58.449,58.245,114.837)
O5': (61.033,55.346,110.942)
C3': (58.936,53.733,112.066)
C1': (59.451,54.213,114.303)
O4': (60.666,54.100,113.568)
C5': (61.334,53.977,111.219)
P: (61.856,56.182,109.867)
O2: (57.778,55.143,116.257)
C4': (60.406,53.449,112.288)
C2': (58.372,53.533,113.462)
O2': (58.267,52.171,113.823)
N1: (59.132,55.644,114.483)
N3: (57.931,57.333,115.663)
N4: (58.100,59.520,115.012)
C6: (59.664,56.595,113.653)
C5: (59.348,57.891,113.791)
O3': (58.323,52.922,111.080)
OP1: (63.261,55.706,109.841)
OP2: (61.070,56.198,108.604)
C4: (58.449,58.245,114.837)
O5': (61.033,55.346,110.942)
C3': (58.936,53.733,112.066)
C1': (59.451,54.213,114.303)
O4': (60.666,54.100,113.568)
C5': (61.334,53.977,111.219)
P: (61.856,56.182,109.867)
O2: (57.778,55.143,116.257)
C4': (60.406,53.449,112.288)
C2': (58.372,53.533,113.462)
O2': (58.267,52.171,113.823)
N1: (59.132,55.644,114.483)
N3: (57.931,57.333,115.663)
N4: (58.100,59.520,115.012)
C6: (59.664,56.595,113.653)
C5: (59.348,57.891,113.791)
O3': (58.323,52.922,111.080)
C4: (60.682,64.540,112.044)
N3: (59.959,63.484,112.569)
OP1: (65.160,60.988,106.731)
OP2: (63.601,62.974,107.157)
C2: (60.209,62.143,112.397)
C1': (61.664,60.439,111.369)
C3': (62.244,58.782,109.786)
O5': (63.876,61.205,108.859)
O4': (63.073,60.323,111.396)
C5': (64.481,60.045,109.455)
P: (64.586,61.986,107.664)
C4': (63.514,59.364,110.399)
C2': (61.221,59.892,110.015)
O2': (59.900,59.391,110.103)
N1: (61.314,61.851,111.594)
O4: (60.339,65.702,112.293)
O2: (59.509,61.286,112.920)
C6: (62.063,62.858,111.037)
C5: (61.797,64.152,111.233)
O3': (61.859,57.641,110.540)
N3: (59.959,63.484,112.569)
OP1: (65.160,60.988,106.731)
OP2: (63.601,62.974,107.157)
C2: (60.209,62.143,112.397)
C1': (61.664,60.439,111.369)
C3': (62.244,58.782,109.786)
O5': (63.876,61.205,108.859)
O4': (63.073,60.323,111.396)
C5': (64.481,60.045,109.455)
P: (64.586,61.986,107.664)
C4': (63.514,59.364,110.399)
C2': (61.221,59.892,110.015)
O2': (59.900,59.391,110.103)
N1: (61.314,61.851,111.594)
O4: (60.339,65.702,112.293)
O2: (59.509,61.286,112.920)
C6: (62.063,62.858,111.037)
C5: (61.797,64.152,111.233)
O3': (61.859,57.641,110.540)
Image (generated by PyMOL):