Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0969:0968
Extra
PDB:
ATOM 1 O3' U A 968 61.473 57.287 110.152 1.00 43.29 O
ATOM 2 P C A 969 61.430 55.832 109.486 1.00 45.61 P
ATOM 3 OP1 C A 969 62.800 55.278 109.551 1.00 45.43 O
ATOM 4 OP2 C A 969 60.741 55.915 108.174 1.00 44.84 O
ATOM 5 O5' C A 969 60.507 55.016 110.494 1.00 45.83 O
ATOM 6 C5' C A 969 60.794 53.643 110.807 1.00 47.65 C
ATOM 7 C4' C A 969 59.899 53.151 111.922 1.00 47.90 C
ATOM 8 O4' C A 969 60.225 53.820 113.175 1.00 48.24 O
ATOM 9 C3' C A 969 58.422 53.441 111.753 1.00 47.02 C
ATOM 10 O3' C A 969 57.762 52.590 110.835 1.00 45.03 O
ATOM 11 C2' C A 969 57.912 53.296 113.176 1.00 46.82 C
ATOM 12 O2' C A 969 57.805 51.950 113.578 1.00 45.98 O
ATOM 13 C1' C A 969 59.041 53.975 113.951 1.00 48.31 C
ATOM 14 N1 C A 969 58.756 55.416 114.121 1.00 50.25 N
ATOM 15 C2 C A 969 57.940 55.817 115.186 1.00 50.61 C
ATOM 16 O2 C A 969 57.509 54.957 115.971 1.00 52.95 O
ATOM 17 N3 C A 969 57.636 57.126 115.332 1.00 49.20 N
ATOM 18 C4 C A 969 58.111 58.020 114.470 1.00 48.38 C
ATOM 19 N4 C A 969 57.766 59.294 114.645 1.00 47.75 N
ATOM 20 C5 C A 969 58.958 57.648 113.388 1.00 49.76 C
ATOM 21 C6 C A 969 59.256 56.349 113.252 1.00 50.42 C
ATOM 22 P C A 970 56.497 53.157 110.030 1.00 43.60 P
ATOM 23 OP1 C A 970 55.626 52.009 109.687 1.00 44.70 O
ATOM 24 OP2 C A 970 57.006 54.047 108.951 1.00 43.33 O
ATOM 25 O5' C A 970 55.748 54.027 111.135 1.00 40.56 O
TER
ATOM 1 O3' C B 967 65.446 62.412 107.999 1.00 36.04 O
ATOM 2 P U B 968 64.210 61.626 107.316 1.00 37.62 P
ATOM 3 OP1 U B 968 64.761 60.645 106.345 1.00 36.78 O
ATOM 4 OP2 U B 968 63.211 62.627 106.865 1.00 38.61 O
ATOM 5 O5' U B 968 63.515 60.815 108.493 1.00 38.38 O
ATOM 6 C5' U B 968 64.128 59.650 109.066 1.00 39.11 C
ATOM 7 C4' U B 968 63.167 58.979 110.019 1.00 40.76 C
ATOM 8 O4' U B 968 62.721 59.959 111.000 1.00 40.03 O
ATOM 9 C3' U B 968 61.898 58.405 109.391 1.00 40.93 C
ATOM 10 O3' U B 968 61.473 57.287 110.152 1.00 43.29 O
ATOM 11 C2' U B 968 60.891 59.531 109.586 1.00 41.09 C
ATOM 12 O2' U B 968 59.560 59.067 109.650 1.00 39.70 O
ATOM 13 C1' U B 968 61.313 60.080 110.945 1.00 41.02 C
ATOM 14 N1 U B 968 60.958 61.491 111.143 1.00 42.29 N
ATOM 15 C2 U B 968 59.897 61.777 111.979 1.00 43.76 C
ATOM 16 O2 U B 968 59.220 60.917 112.511 1.00 43.91 O
ATOM 17 N3 U B 968 59.649 63.114 112.161 1.00 45.17 N
ATOM 18 C4 U B 968 60.326 64.170 111.587 1.00 45.38 C
ATOM 19 O4 U B 968 59.988 65.324 111.852 1.00 46.28 O
ATOM 20 C5 U B 968 61.390 63.790 110.714 1.00 45.40 C
ATOM 21 C6 U B 968 61.664 62.496 110.528 1.00 43.68 C
ATOM 22 P C B 969 61.430 55.832 109.486 1.00 45.61 P
ATOM 23 OP1 C B 969 62.800 55.278 109.551 1.00 45.43 O
ATOM 24 OP2 C B 969 60.741 55.915 108.174 1.00 44.84 O
ATOM 25 O5' C B 969 60.507 55.016 110.494 1.00 45.83 O
TER
ATOM 2 P C A 969 61.430 55.832 109.486 1.00 45.61 P
ATOM 3 OP1 C A 969 62.800 55.278 109.551 1.00 45.43 O
ATOM 4 OP2 C A 969 60.741 55.915 108.174 1.00 44.84 O
ATOM 5 O5' C A 969 60.507 55.016 110.494 1.00 45.83 O
ATOM 6 C5' C A 969 60.794 53.643 110.807 1.00 47.65 C
ATOM 7 C4' C A 969 59.899 53.151 111.922 1.00 47.90 C
ATOM 8 O4' C A 969 60.225 53.820 113.175 1.00 48.24 O
ATOM 9 C3' C A 969 58.422 53.441 111.753 1.00 47.02 C
ATOM 10 O3' C A 969 57.762 52.590 110.835 1.00 45.03 O
ATOM 11 C2' C A 969 57.912 53.296 113.176 1.00 46.82 C
ATOM 12 O2' C A 969 57.805 51.950 113.578 1.00 45.98 O
ATOM 13 C1' C A 969 59.041 53.975 113.951 1.00 48.31 C
ATOM 14 N1 C A 969 58.756 55.416 114.121 1.00 50.25 N
ATOM 15 C2 C A 969 57.940 55.817 115.186 1.00 50.61 C
ATOM 16 O2 C A 969 57.509 54.957 115.971 1.00 52.95 O
ATOM 17 N3 C A 969 57.636 57.126 115.332 1.00 49.20 N
ATOM 18 C4 C A 969 58.111 58.020 114.470 1.00 48.38 C
ATOM 19 N4 C A 969 57.766 59.294 114.645 1.00 47.75 N
ATOM 20 C5 C A 969 58.958 57.648 113.388 1.00 49.76 C
ATOM 21 C6 C A 969 59.256 56.349 113.252 1.00 50.42 C
ATOM 22 P C A 970 56.497 53.157 110.030 1.00 43.60 P
ATOM 23 OP1 C A 970 55.626 52.009 109.687 1.00 44.70 O
ATOM 24 OP2 C A 970 57.006 54.047 108.951 1.00 43.33 O
ATOM 25 O5' C A 970 55.748 54.027 111.135 1.00 40.56 O
TER
ATOM 1 O3' C B 967 65.446 62.412 107.999 1.00 36.04 O
ATOM 2 P U B 968 64.210 61.626 107.316 1.00 37.62 P
ATOM 3 OP1 U B 968 64.761 60.645 106.345 1.00 36.78 O
ATOM 4 OP2 U B 968 63.211 62.627 106.865 1.00 38.61 O
ATOM 5 O5' U B 968 63.515 60.815 108.493 1.00 38.38 O
ATOM 6 C5' U B 968 64.128 59.650 109.066 1.00 39.11 C
ATOM 7 C4' U B 968 63.167 58.979 110.019 1.00 40.76 C
ATOM 8 O4' U B 968 62.721 59.959 111.000 1.00 40.03 O
ATOM 9 C3' U B 968 61.898 58.405 109.391 1.00 40.93 C
ATOM 10 O3' U B 968 61.473 57.287 110.152 1.00 43.29 O
ATOM 11 C2' U B 968 60.891 59.531 109.586 1.00 41.09 C
ATOM 12 O2' U B 968 59.560 59.067 109.650 1.00 39.70 O
ATOM 13 C1' U B 968 61.313 60.080 110.945 1.00 41.02 C
ATOM 14 N1 U B 968 60.958 61.491 111.143 1.00 42.29 N
ATOM 15 C2 U B 968 59.897 61.777 111.979 1.00 43.76 C
ATOM 16 O2 U B 968 59.220 60.917 112.511 1.00 43.91 O
ATOM 17 N3 U B 968 59.649 63.114 112.161 1.00 45.17 N
ATOM 18 C4 U B 968 60.326 64.170 111.587 1.00 45.38 C
ATOM 19 O4 U B 968 59.988 65.324 111.852 1.00 46.28 O
ATOM 20 C5 U B 968 61.390 63.790 110.714 1.00 45.40 C
ATOM 21 C6 U B 968 61.664 62.496 110.528 1.00 43.68 C
ATOM 22 P C B 969 61.430 55.832 109.486 1.00 45.61 P
ATOM 23 OP1 C B 969 62.800 55.278 109.551 1.00 45.43 O
ATOM 24 OP2 C B 969 60.741 55.915 108.174 1.00 44.84 O
ATOM 25 O5' C B 969 60.507 55.016 110.494 1.00 45.83 O
TER
Atoms:
C2: (57.940,55.817,115.186)
OP1: (62.800,55.278,109.551)
OP2: (60.741,55.915,108.174)
C4: (58.111,58.020,114.470)
O5': (60.507,55.016,110.494)
C3': (58.422,53.441,111.753)
C1': (59.041,53.975,113.951)
O4': (60.225,53.820,113.175)
C5': (60.794,53.643,110.807)
P: (61.430,55.832,109.486)
O2: (57.509,54.957,115.971)
C4': (59.899,53.151,111.922)
C2': (57.912,53.296,113.176)
O2': (57.805,51.950,113.578)
N1: (58.756,55.416,114.121)
N3: (57.636,57.126,115.332)
N4: (57.766,59.294,114.645)
C6: (59.256,56.349,113.252)
C5: (58.958,57.648,113.388)
O3': (57.762,52.590,110.835)
OP1: (62.800,55.278,109.551)
OP2: (60.741,55.915,108.174)
C4: (58.111,58.020,114.470)
O5': (60.507,55.016,110.494)
C3': (58.422,53.441,111.753)
C1': (59.041,53.975,113.951)
O4': (60.225,53.820,113.175)
C5': (60.794,53.643,110.807)
P: (61.430,55.832,109.486)
O2: (57.509,54.957,115.971)
C4': (59.899,53.151,111.922)
C2': (57.912,53.296,113.176)
O2': (57.805,51.950,113.578)
N1: (58.756,55.416,114.121)
N3: (57.636,57.126,115.332)
N4: (57.766,59.294,114.645)
C6: (59.256,56.349,113.252)
C5: (58.958,57.648,113.388)
O3': (57.762,52.590,110.835)
C4: (60.326,64.170,111.587)
N3: (59.649,63.114,112.161)
OP1: (64.761,60.645,106.345)
OP2: (63.211,62.627,106.865)
C2: (59.897,61.777,111.979)
C1': (61.313,60.080,110.945)
C3': (61.898,58.405,109.391)
O5': (63.515,60.815,108.493)
O4': (62.721,59.959,111.000)
C5': (64.128,59.650,109.066)
P: (64.210,61.626,107.316)
C4': (63.167,58.979,110.019)
C2': (60.891,59.531,109.586)
O2': (59.560,59.067,109.650)
N1: (60.958,61.491,111.143)
O4: (59.988,65.324,111.852)
O2: (59.220,60.917,112.511)
C6: (61.664,62.496,110.528)
C5: (61.390,63.790,110.714)
O3': (61.473,57.287,110.152)
N3: (59.649,63.114,112.161)
OP1: (64.761,60.645,106.345)
OP2: (63.211,62.627,106.865)
C2: (59.897,61.777,111.979)
C1': (61.313,60.080,110.945)
C3': (61.898,58.405,109.391)
O5': (63.515,60.815,108.493)
O4': (62.721,59.959,111.000)
C5': (64.128,59.650,109.066)
P: (64.210,61.626,107.316)
C4': (63.167,58.979,110.019)
C2': (60.891,59.531,109.586)
O2': (59.560,59.067,109.650)
N1: (60.958,61.491,111.143)
O4: (59.988,65.324,111.852)
O2: (59.220,60.917,112.511)
C6: (61.664,62.496,110.528)
C5: (61.390,63.790,110.714)
O3': (61.473,57.287,110.152)
Image (generated by PyMOL):