Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2580:A2579
Extra
PDB:
ATOM 1 O3' U A2579 -10.124 -53.636 -20.420 1.00 71.82 O
ATOM 2 P C A2580 -10.525 -52.251 -21.108 1.00 52.43 P
ATOM 3 OP1 C A2580 -10.843 -51.312 -20.004 1.00 91.32 O
ATOM 4 OP2 C A2580 -11.544 -52.523 -22.164 1.00 91.38 O
ATOM 5 O5' C A2580 -9.171 -51.812 -21.824 1.00 58.86 O
ATOM 6 C5' C A2580 -8.471 -50.630 -21.418 1.00 58.86 C
ATOM 7 C4' C A2580 -7.909 -49.922 -22.624 1.00 58.86 C
ATOM 8 O4' C A2580 -6.703 -50.582 -23.077 1.00 58.86 O
ATOM 9 C3' C A2580 -8.818 -49.885 -23.842 1.00 58.86 C
ATOM 10 O3' C A2580 -9.741 -48.814 -23.770 1.00 58.86 O
ATOM 11 C2' C A2580 -7.837 -49.704 -24.990 1.00 58.86 C
ATOM 12 O2' C A2580 -7.515 -48.342 -25.201 1.00 58.86 O
ATOM 13 C1' C A2580 -6.615 -50.480 -24.486 1.00 58.86 C
ATOM 14 N1 C A2580 -6.520 -51.836 -25.043 1.00 60.81 N
ATOM 15 C2 C A2580 -5.971 -52.003 -26.316 1.00 60.80 C
ATOM 16 O2 C A2580 -5.559 -51.006 -26.931 1.00 60.70 O
ATOM 17 N3 C A2580 -5.899 -53.244 -26.844 1.00 60.83 N
ATOM 18 C4 C A2580 -6.338 -54.290 -26.145 1.00 60.82 C
ATOM 19 N4 C A2580 -6.244 -55.493 -26.700 1.00 60.73 N
ATOM 20 C5 C A2580 -6.891 -54.147 -24.845 1.00 60.84 C
ATOM 21 C6 C A2580 -6.963 -52.916 -24.338 1.00 60.85 C
ATOM 22 P C A2581 -11.047 -48.837 -24.697 1.00 30.61 P
ATOM 23 OP1 C A2581 -11.783 -47.585 -24.402 1.00 65.53 O
ATOM 24 OP2 C A2581 -11.738 -50.144 -24.547 1.00 65.53 O
ATOM 25 O5' C A2581 -10.457 -48.757 -26.177 1.00 29.81 O
TER
ATOM 1 O3' C B2578 -11.627 -59.473 -19.247 1.00 29.20 O
ATOM 2 P U B2579 -10.057 -59.102 -19.361 1.00 28.12 P
ATOM 3 OP1 U B2579 -9.748 -59.025 -20.806 1.00 71.44 O
ATOM 4 OP2 U B2579 -9.302 -60.041 -18.500 1.00 71.43 O
ATOM 5 O5' U B2579 -9.903 -57.667 -18.713 1.00 71.82 O
ATOM 6 C5' U B2579 -10.510 -56.543 -19.327 1.00 71.82 C
ATOM 7 C4' U B2579 -9.579 -55.940 -20.336 1.00 71.82 C
ATOM 8 O4' U B2579 -9.161 -56.928 -21.306 1.00 71.82 O
ATOM 9 C3' U B2579 -10.203 -54.840 -21.165 1.00 71.82 C
ATOM 10 O3' U B2579 -10.124 -53.636 -20.420 1.00 71.82 O
ATOM 11 C2' U B2579 -9.335 -54.821 -22.420 1.00 71.82 C
ATOM 12 O2' U B2579 -8.170 -54.055 -22.188 1.00 71.82 O
ATOM 13 C1' U B2579 -8.920 -56.289 -22.544 1.00 71.82 C
ATOM 14 N1 U B2579 -9.492 -57.096 -23.636 1.00 74.97 N
ATOM 15 C2 U B2579 -8.643 -57.440 -24.677 1.00 74.98 C
ATOM 16 O2 U B2579 -7.500 -57.039 -24.759 1.00 75.00 O
ATOM 17 N3 U B2579 -9.182 -58.265 -25.625 1.00 74.99 N
ATOM 18 C4 U B2579 -10.454 -58.760 -25.662 1.00 75.01 C
ATOM 19 O4 U B2579 -10.753 -59.573 -26.542 1.00 75.02 O
ATOM 20 C5 U B2579 -11.296 -58.326 -24.580 1.00 75.01 C
ATOM 21 C6 U B2579 -10.796 -57.526 -23.627 1.00 74.98 C
ATOM 22 P C B2580 -10.525 -52.251 -21.108 1.00 52.43 P
ATOM 23 OP1 C B2580 -10.843 -51.312 -20.004 1.00 91.32 O
ATOM 24 OP2 C B2580 -11.544 -52.523 -22.164 1.00 91.38 O
ATOM 25 O5' C B2580 -9.171 -51.812 -21.824 1.00 58.86 O
TER
ATOM 2 P C A2580 -10.525 -52.251 -21.108 1.00 52.43 P
ATOM 3 OP1 C A2580 -10.843 -51.312 -20.004 1.00 91.32 O
ATOM 4 OP2 C A2580 -11.544 -52.523 -22.164 1.00 91.38 O
ATOM 5 O5' C A2580 -9.171 -51.812 -21.824 1.00 58.86 O
ATOM 6 C5' C A2580 -8.471 -50.630 -21.418 1.00 58.86 C
ATOM 7 C4' C A2580 -7.909 -49.922 -22.624 1.00 58.86 C
ATOM 8 O4' C A2580 -6.703 -50.582 -23.077 1.00 58.86 O
ATOM 9 C3' C A2580 -8.818 -49.885 -23.842 1.00 58.86 C
ATOM 10 O3' C A2580 -9.741 -48.814 -23.770 1.00 58.86 O
ATOM 11 C2' C A2580 -7.837 -49.704 -24.990 1.00 58.86 C
ATOM 12 O2' C A2580 -7.515 -48.342 -25.201 1.00 58.86 O
ATOM 13 C1' C A2580 -6.615 -50.480 -24.486 1.00 58.86 C
ATOM 14 N1 C A2580 -6.520 -51.836 -25.043 1.00 60.81 N
ATOM 15 C2 C A2580 -5.971 -52.003 -26.316 1.00 60.80 C
ATOM 16 O2 C A2580 -5.559 -51.006 -26.931 1.00 60.70 O
ATOM 17 N3 C A2580 -5.899 -53.244 -26.844 1.00 60.83 N
ATOM 18 C4 C A2580 -6.338 -54.290 -26.145 1.00 60.82 C
ATOM 19 N4 C A2580 -6.244 -55.493 -26.700 1.00 60.73 N
ATOM 20 C5 C A2580 -6.891 -54.147 -24.845 1.00 60.84 C
ATOM 21 C6 C A2580 -6.963 -52.916 -24.338 1.00 60.85 C
ATOM 22 P C A2581 -11.047 -48.837 -24.697 1.00 30.61 P
ATOM 23 OP1 C A2581 -11.783 -47.585 -24.402 1.00 65.53 O
ATOM 24 OP2 C A2581 -11.738 -50.144 -24.547 1.00 65.53 O
ATOM 25 O5' C A2581 -10.457 -48.757 -26.177 1.00 29.81 O
TER
ATOM 1 O3' C B2578 -11.627 -59.473 -19.247 1.00 29.20 O
ATOM 2 P U B2579 -10.057 -59.102 -19.361 1.00 28.12 P
ATOM 3 OP1 U B2579 -9.748 -59.025 -20.806 1.00 71.44 O
ATOM 4 OP2 U B2579 -9.302 -60.041 -18.500 1.00 71.43 O
ATOM 5 O5' U B2579 -9.903 -57.667 -18.713 1.00 71.82 O
ATOM 6 C5' U B2579 -10.510 -56.543 -19.327 1.00 71.82 C
ATOM 7 C4' U B2579 -9.579 -55.940 -20.336 1.00 71.82 C
ATOM 8 O4' U B2579 -9.161 -56.928 -21.306 1.00 71.82 O
ATOM 9 C3' U B2579 -10.203 -54.840 -21.165 1.00 71.82 C
ATOM 10 O3' U B2579 -10.124 -53.636 -20.420 1.00 71.82 O
ATOM 11 C2' U B2579 -9.335 -54.821 -22.420 1.00 71.82 C
ATOM 12 O2' U B2579 -8.170 -54.055 -22.188 1.00 71.82 O
ATOM 13 C1' U B2579 -8.920 -56.289 -22.544 1.00 71.82 C
ATOM 14 N1 U B2579 -9.492 -57.096 -23.636 1.00 74.97 N
ATOM 15 C2 U B2579 -8.643 -57.440 -24.677 1.00 74.98 C
ATOM 16 O2 U B2579 -7.500 -57.039 -24.759 1.00 75.00 O
ATOM 17 N3 U B2579 -9.182 -58.265 -25.625 1.00 74.99 N
ATOM 18 C4 U B2579 -10.454 -58.760 -25.662 1.00 75.01 C
ATOM 19 O4 U B2579 -10.753 -59.573 -26.542 1.00 75.02 O
ATOM 20 C5 U B2579 -11.296 -58.326 -24.580 1.00 75.01 C
ATOM 21 C6 U B2579 -10.796 -57.526 -23.627 1.00 74.98 C
ATOM 22 P C B2580 -10.525 -52.251 -21.108 1.00 52.43 P
ATOM 23 OP1 C B2580 -10.843 -51.312 -20.004 1.00 91.32 O
ATOM 24 OP2 C B2580 -11.544 -52.523 -22.164 1.00 91.38 O
ATOM 25 O5' C B2580 -9.171 -51.812 -21.824 1.00 58.86 O
TER
Atoms:
C2: (-5.971,-52.003,-26.316)
OP1: (-10.843,-51.312,-20.004)
OP2: (-11.544,-52.523,-22.164)
C4: (-6.338,-54.290,-26.145)
O5': (-9.171,-51.812,-21.824)
C3': (-8.818,-49.885,-23.842)
C1': (-6.615,-50.480,-24.486)
O4': (-6.703,-50.582,-23.077)
C5': (-8.471,-50.630,-21.418)
P: (-10.525,-52.251,-21.108)
O2: (-5.559,-51.006,-26.931)
C4': (-7.909,-49.922,-22.624)
C2': (-7.837,-49.704,-24.990)
O2': (-7.515,-48.342,-25.201)
N1: (-6.520,-51.836,-25.043)
N3: (-5.899,-53.244,-26.844)
N4: (-6.244,-55.493,-26.700)
C6: (-6.963,-52.916,-24.338)
C5: (-6.891,-54.147,-24.845)
O3': (-9.741,-48.814,-23.770)
OP1: (-10.843,-51.312,-20.004)
OP2: (-11.544,-52.523,-22.164)
C4: (-6.338,-54.290,-26.145)
O5': (-9.171,-51.812,-21.824)
C3': (-8.818,-49.885,-23.842)
C1': (-6.615,-50.480,-24.486)
O4': (-6.703,-50.582,-23.077)
C5': (-8.471,-50.630,-21.418)
P: (-10.525,-52.251,-21.108)
O2: (-5.559,-51.006,-26.931)
C4': (-7.909,-49.922,-22.624)
C2': (-7.837,-49.704,-24.990)
O2': (-7.515,-48.342,-25.201)
N1: (-6.520,-51.836,-25.043)
N3: (-5.899,-53.244,-26.844)
N4: (-6.244,-55.493,-26.700)
C6: (-6.963,-52.916,-24.338)
C5: (-6.891,-54.147,-24.845)
O3': (-9.741,-48.814,-23.770)
C4: (-10.454,-58.760,-25.662)
N3: (-9.182,-58.265,-25.625)
OP1: (-9.748,-59.025,-20.806)
OP2: (-9.302,-60.041,-18.500)
C2: (-8.643,-57.440,-24.677)
C1': (-8.920,-56.289,-22.544)
C3': (-10.203,-54.840,-21.165)
O5': (-9.903,-57.667,-18.713)
O4': (-9.161,-56.928,-21.306)
C5': (-10.510,-56.543,-19.327)
P: (-10.057,-59.102,-19.361)
C4': (-9.579,-55.940,-20.336)
C2': (-9.335,-54.821,-22.420)
O2': (-8.170,-54.055,-22.188)
N1: (-9.492,-57.096,-23.636)
O4: (-10.753,-59.573,-26.542)
O2: (-7.500,-57.039,-24.759)
C6: (-10.796,-57.526,-23.627)
C5: (-11.296,-58.326,-24.580)
O3': (-10.124,-53.636,-20.420)
N3: (-9.182,-58.265,-25.625)
OP1: (-9.748,-59.025,-20.806)
OP2: (-9.302,-60.041,-18.500)
C2: (-8.643,-57.440,-24.677)
C1': (-8.920,-56.289,-22.544)
C3': (-10.203,-54.840,-21.165)
O5': (-9.903,-57.667,-18.713)
O4': (-9.161,-56.928,-21.306)
C5': (-10.510,-56.543,-19.327)
P: (-10.057,-59.102,-19.361)
C4': (-9.579,-55.940,-20.336)
C2': (-9.335,-54.821,-22.420)
O2': (-8.170,-54.055,-22.188)
N1: (-9.492,-57.096,-23.636)
O4: (-10.753,-59.573,-26.542)
O2: (-7.500,-57.039,-24.759)
C6: (-10.796,-57.526,-23.627)
C5: (-11.296,-58.326,-24.580)
O3': (-10.124,-53.636,-20.420)
Image (generated by PyMOL):