Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A119:A224
Extra
PDB:
ATOM 1 O3' G A 118 107.677 73.385 -25.102 1.00 54.37 O
ATOM 2 P A A 119 108.118 72.414 -26.340 1.00 48.90 P
ATOM 3 OP1 A A 119 109.382 72.946 -26.879 1.00 49.22 O
ATOM 4 OP2 A A 119 107.022 72.088 -27.270 1.00 49.22 O
ATOM 5 O5' A A 119 108.510 71.057 -25.612 1.00 48.90 O
ATOM 6 C5' A A 119 108.306 69.795 -26.247 1.00 48.90 C
ATOM 7 C4' A A 119 108.787 68.695 -25.347 1.00 48.90 C
ATOM 8 O4' A A 119 110.224 68.803 -25.212 1.00 48.90 O
ATOM 9 C3' A A 119 108.219 68.694 -23.936 1.00 48.90 C
ATOM 10 O3' A A 119 108.049 67.331 -23.545 1.00 48.90 O
ATOM 11 C2' A A 119 109.323 69.362 -23.125 1.00 48.90 C
ATOM 12 O2' A A 119 109.358 68.950 -21.780 1.00 48.90 O
ATOM 13 C1' A A 119 110.575 68.881 -23.852 1.00 48.90 C
ATOM 14 N9 A A 119 111.735 69.770 -23.737 1.00 49.22 N
ATOM 15 C8 A A 119 111.850 71.039 -24.241 1.00 49.22 C
ATOM 16 N7 A A 119 113.016 71.594 -24.018 1.00 49.22 N
ATOM 17 C5 A A 119 113.717 70.628 -23.316 1.00 49.22 C
ATOM 18 C6 A A 119 115.016 70.607 -22.802 1.00 49.22 C
ATOM 19 N6 A A 119 115.864 71.633 -22.912 1.00 49.22 N
ATOM 20 N1 A A 119 115.420 69.489 -22.162 1.00 49.22 N
ATOM 21 C2 A A 119 114.557 68.476 -22.044 1.00 49.22 C
ATOM 22 N3 A A 119 113.305 68.380 -22.479 1.00 49.22 N
ATOM 23 C4 A A 119 112.940 69.502 -23.122 1.00 49.22 C
ATOM 24 P C A 120 106.897 66.916 -22.492 1.00 50.54 P
ATOM 25 OP1 C A 120 106.929 65.430 -22.462 1.00 36.19 O
ATOM 26 OP2 C A 120 105.609 67.610 -22.780 1.00 36.19 O
ATOM 27 O5' C A 120 107.458 67.461 -21.102 1.00 50.54 O
TER
ATOM 1 O3' C B 223 120.735 69.202 -20.930 1.00 37.58 O
ATOM 2 P C B 224 121.816 70.376 -21.159 1.00 42.34 P
ATOM 3 OP1 C B 224 122.799 69.832 -22.154 1.00 30.25 O
ATOM 4 OP2 C B 224 122.301 70.918 -19.870 1.00 30.25 O
ATOM 5 O5' C B 224 120.974 71.511 -21.878 1.00 42.34 O
ATOM 6 C5' C B 224 120.330 71.224 -23.122 1.00 42.34 C
ATOM 7 C4' C B 224 119.559 72.417 -23.599 1.00 42.34 C
ATOM 8 O4' C B 224 118.417 72.649 -22.741 1.00 42.34 O
ATOM 9 C3' C B 224 120.315 73.730 -23.595 1.00 42.34 C
ATOM 10 O3' C B 224 121.126 73.864 -24.748 1.00 42.34 O
ATOM 11 C2' C B 224 119.183 74.737 -23.560 1.00 42.34 C
ATOM 12 O2' C B 224 118.617 74.868 -24.850 1.00 42.34 O
ATOM 13 C1' C B 224 118.183 74.035 -22.640 1.00 42.34 C
ATOM 14 N1 C B 224 118.358 74.419 -21.235 1.00 30.25 N
ATOM 15 C2 C B 224 118.023 75.714 -20.845 1.00 30.25 C
ATOM 16 O2 C B 224 117.555 76.488 -21.690 1.00 30.25 O
ATOM 17 N3 C B 224 118.212 76.093 -19.564 1.00 30.25 N
ATOM 18 C4 C B 224 118.707 75.227 -18.686 1.00 30.25 C
ATOM 19 N4 C B 224 118.892 75.645 -17.445 1.00 30.25 N
ATOM 20 C5 C B 224 119.037 73.891 -19.046 1.00 30.25 C
ATOM 21 C6 C B 224 118.851 73.533 -20.319 1.00 30.25 C
ATOM 22 P C B 225 122.463 74.747 -24.671 1.00 40.36 P
ATOM 23 OP1 C B 225 123.195 74.429 -25.924 1.00 31.49 O
ATOM 24 OP2 C B 225 123.146 74.555 -23.365 1.00 31.49 O
ATOM 25 O5' C B 225 121.911 76.240 -24.705 1.00 40.36 O
TER
ATOM 2 P A A 119 108.118 72.414 -26.340 1.00 48.90 P
ATOM 3 OP1 A A 119 109.382 72.946 -26.879 1.00 49.22 O
ATOM 4 OP2 A A 119 107.022 72.088 -27.270 1.00 49.22 O
ATOM 5 O5' A A 119 108.510 71.057 -25.612 1.00 48.90 O
ATOM 6 C5' A A 119 108.306 69.795 -26.247 1.00 48.90 C
ATOM 7 C4' A A 119 108.787 68.695 -25.347 1.00 48.90 C
ATOM 8 O4' A A 119 110.224 68.803 -25.212 1.00 48.90 O
ATOM 9 C3' A A 119 108.219 68.694 -23.936 1.00 48.90 C
ATOM 10 O3' A A 119 108.049 67.331 -23.545 1.00 48.90 O
ATOM 11 C2' A A 119 109.323 69.362 -23.125 1.00 48.90 C
ATOM 12 O2' A A 119 109.358 68.950 -21.780 1.00 48.90 O
ATOM 13 C1' A A 119 110.575 68.881 -23.852 1.00 48.90 C
ATOM 14 N9 A A 119 111.735 69.770 -23.737 1.00 49.22 N
ATOM 15 C8 A A 119 111.850 71.039 -24.241 1.00 49.22 C
ATOM 16 N7 A A 119 113.016 71.594 -24.018 1.00 49.22 N
ATOM 17 C5 A A 119 113.717 70.628 -23.316 1.00 49.22 C
ATOM 18 C6 A A 119 115.016 70.607 -22.802 1.00 49.22 C
ATOM 19 N6 A A 119 115.864 71.633 -22.912 1.00 49.22 N
ATOM 20 N1 A A 119 115.420 69.489 -22.162 1.00 49.22 N
ATOM 21 C2 A A 119 114.557 68.476 -22.044 1.00 49.22 C
ATOM 22 N3 A A 119 113.305 68.380 -22.479 1.00 49.22 N
ATOM 23 C4 A A 119 112.940 69.502 -23.122 1.00 49.22 C
ATOM 24 P C A 120 106.897 66.916 -22.492 1.00 50.54 P
ATOM 25 OP1 C A 120 106.929 65.430 -22.462 1.00 36.19 O
ATOM 26 OP2 C A 120 105.609 67.610 -22.780 1.00 36.19 O
ATOM 27 O5' C A 120 107.458 67.461 -21.102 1.00 50.54 O
TER
ATOM 1 O3' C B 223 120.735 69.202 -20.930 1.00 37.58 O
ATOM 2 P C B 224 121.816 70.376 -21.159 1.00 42.34 P
ATOM 3 OP1 C B 224 122.799 69.832 -22.154 1.00 30.25 O
ATOM 4 OP2 C B 224 122.301 70.918 -19.870 1.00 30.25 O
ATOM 5 O5' C B 224 120.974 71.511 -21.878 1.00 42.34 O
ATOM 6 C5' C B 224 120.330 71.224 -23.122 1.00 42.34 C
ATOM 7 C4' C B 224 119.559 72.417 -23.599 1.00 42.34 C
ATOM 8 O4' C B 224 118.417 72.649 -22.741 1.00 42.34 O
ATOM 9 C3' C B 224 120.315 73.730 -23.595 1.00 42.34 C
ATOM 10 O3' C B 224 121.126 73.864 -24.748 1.00 42.34 O
ATOM 11 C2' C B 224 119.183 74.737 -23.560 1.00 42.34 C
ATOM 12 O2' C B 224 118.617 74.868 -24.850 1.00 42.34 O
ATOM 13 C1' C B 224 118.183 74.035 -22.640 1.00 42.34 C
ATOM 14 N1 C B 224 118.358 74.419 -21.235 1.00 30.25 N
ATOM 15 C2 C B 224 118.023 75.714 -20.845 1.00 30.25 C
ATOM 16 O2 C B 224 117.555 76.488 -21.690 1.00 30.25 O
ATOM 17 N3 C B 224 118.212 76.093 -19.564 1.00 30.25 N
ATOM 18 C4 C B 224 118.707 75.227 -18.686 1.00 30.25 C
ATOM 19 N4 C B 224 118.892 75.645 -17.445 1.00 30.25 N
ATOM 20 C5 C B 224 119.037 73.891 -19.046 1.00 30.25 C
ATOM 21 C6 C B 224 118.851 73.533 -20.319 1.00 30.25 C
ATOM 22 P C B 225 122.463 74.747 -24.671 1.00 40.36 P
ATOM 23 OP1 C B 225 123.195 74.429 -25.924 1.00 31.49 O
ATOM 24 OP2 C B 225 123.146 74.555 -23.365 1.00 31.49 O
ATOM 25 O5' C B 225 121.911 76.240 -24.705 1.00 40.36 O
TER
Atoms:
OP1: (109.382,72.946,-26.879)
OP2: (107.022,72.088,-27.270)
C3': (108.219,68.694,-23.936)
C1': (110.575,68.881,-23.852)
C5': (108.306,69.795,-26.247)
O4': (110.224,68.803,-25.212)
C8: (111.850,71.039,-24.241)
O2': (109.358,68.950,-21.780)
C6: (115.016,70.607,-22.802)
C5: (113.717,70.628,-23.316)
C4: (112.940,69.502,-23.122)
P: (108.118,72.414,-26.340)
C4': (108.787,68.695,-25.347)
C2': (109.323,69.362,-23.125)
C2: (114.557,68.476,-22.044)
N1: (115.420,69.489,-22.162)
N3: (113.305,68.380,-22.479)
N6: (115.864,71.633,-22.912)
N7: (113.016,71.594,-24.018)
N9: (111.735,69.770,-23.737)
O5': (108.510,71.057,-25.612)
O3': (108.049,67.331,-23.545)
OP2: (107.022,72.088,-27.270)
C3': (108.219,68.694,-23.936)
C1': (110.575,68.881,-23.852)
C5': (108.306,69.795,-26.247)
O4': (110.224,68.803,-25.212)
C8: (111.850,71.039,-24.241)
O2': (109.358,68.950,-21.780)
C6: (115.016,70.607,-22.802)
C5: (113.717,70.628,-23.316)
C4: (112.940,69.502,-23.122)
P: (108.118,72.414,-26.340)
C4': (108.787,68.695,-25.347)
C2': (109.323,69.362,-23.125)
C2: (114.557,68.476,-22.044)
N1: (115.420,69.489,-22.162)
N3: (113.305,68.380,-22.479)
N6: (115.864,71.633,-22.912)
N7: (113.016,71.594,-24.018)
N9: (111.735,69.770,-23.737)
O5': (108.510,71.057,-25.612)
O3': (108.049,67.331,-23.545)
C2: (118.023,75.714,-20.845)
OP1: (122.799,69.832,-22.154)
OP2: (122.301,70.918,-19.870)
C4: (118.707,75.227,-18.686)
O5': (120.974,71.511,-21.878)
C3': (120.315,73.730,-23.595)
C1': (118.183,74.035,-22.640)
O4': (118.417,72.649,-22.741)
C5': (120.330,71.224,-23.122)
P: (121.816,70.376,-21.159)
O2: (117.555,76.488,-21.690)
C4': (119.559,72.417,-23.599)
C2': (119.183,74.737,-23.560)
O2': (118.617,74.868,-24.850)
N1: (118.358,74.419,-21.235)
N3: (118.212,76.093,-19.564)
N4: (118.892,75.645,-17.445)
C6: (118.851,73.533,-20.319)
C5: (119.037,73.891,-19.046)
O3': (121.126,73.864,-24.748)
OP1: (122.799,69.832,-22.154)
OP2: (122.301,70.918,-19.870)
C4: (118.707,75.227,-18.686)
O5': (120.974,71.511,-21.878)
C3': (120.315,73.730,-23.595)
C1': (118.183,74.035,-22.640)
O4': (118.417,72.649,-22.741)
C5': (120.330,71.224,-23.122)
P: (121.816,70.376,-21.159)
O2: (117.555,76.488,-21.690)
C4': (119.559,72.417,-23.599)
C2': (119.183,74.737,-23.560)
O2': (118.617,74.868,-24.850)
N1: (118.358,74.419,-21.235)
N3: (118.212,76.093,-19.564)
N4: (118.892,75.645,-17.445)
C6: (118.851,73.533,-20.319)
C5: (119.037,73.891,-19.046)
O3': (121.126,73.864,-24.748)
Image (generated by PyMOL):