Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A434:A433
Extra
PDB:
ATOM 1 O3' U A 433 -51.712 -70.328 59.008 1.00 8.20 O
ATOM 2 P C A 434 -51.552 -69.947 57.460 1.00 8.40 P
ATOM 3 OP1 C A 434 -52.058 -68.535 57.293 1.00 8.40 O
ATOM 4 OP2 C A 434 -52.200 -71.037 56.682 1.00 8.40 O
ATOM 5 O5' C A 434 -49.981 -69.982 57.226 1.00 8.40 O
ATOM 6 C5' C A 434 -49.435 -69.402 56.055 1.00 8.40 C
ATOM 7 C4' C A 434 -48.235 -68.566 56.363 1.00 8.40 C
ATOM 8 O4' C A 434 -48.561 -67.559 57.344 1.00 8.40 O
ATOM 9 C3' C A 434 -47.111 -69.304 57.008 1.00 8.40 C
ATOM 10 O3' C A 434 -46.411 -70.096 56.126 1.00 8.40 O
ATOM 11 C2' C A 434 -46.304 -68.213 57.641 1.00 8.40 C
ATOM 12 O2' C A 434 -45.537 -67.525 56.666 1.00 8.40 O
ATOM 13 C1' C A 434 -47.426 -67.314 58.151 1.00 8.40 C
ATOM 14 N1 C A 434 -47.768 -67.634 59.537 1.00 8.66 N
ATOM 15 C2 C A 434 -46.831 -67.280 60.509 1.00 8.66 C
ATOM 16 O2 C A 434 -45.784 -66.711 60.163 1.00 8.66 O
ATOM 17 N3 C A 434 -47.065 -67.549 61.798 1.00 8.66 N
ATOM 18 C4 C A 434 -48.195 -68.146 62.115 1.00 8.66 C
ATOM 19 N4 C A 434 -48.377 -68.376 63.405 1.00 8.66 N
ATOM 20 C5 C A 434 -49.171 -68.527 61.149 1.00 8.66 C
ATOM 21 C6 C A 434 -48.916 -68.265 59.865 1.00 8.66 C
ATOM 22 P C A 435 -46.399 -71.639 56.429 1.00 14.36 P
ATOM 23 OP1 C A 435 -45.641 -72.280 55.323 1.00 14.36 O
ATOM 24 OP2 C A 435 -47.819 -72.049 56.678 1.00 14.36 O
ATOM 25 O5' C A 435 -45.574 -71.700 57.791 1.00 14.36 O
TER
ATOM 1 O3' C B 432 -57.913 -68.130 60.621 1.00 0.01 O
ATOM 2 P U B 433 -57.271 -69.498 60.139 1.00 8.20 P
ATOM 3 OP1 U B 433 -57.497 -69.570 58.682 1.00 8.20 O
ATOM 4 OP2 U B 433 -57.816 -70.556 60.993 1.00 8.20 O
ATOM 5 O5' U B 433 -55.725 -69.304 60.458 1.00 8.20 O
ATOM 6 C5' U B 433 -54.888 -68.569 59.579 1.00 8.20 C
ATOM 7 C4' U B 433 -53.434 -68.854 59.828 1.00 8.20 C
ATOM 8 O4' U B 433 -53.123 -68.543 61.208 1.00 8.20 O
ATOM 9 C3' U B 433 -53.010 -70.299 59.600 1.00 8.20 C
ATOM 10 O3' U B 433 -51.712 -70.328 59.008 1.00 8.20 O
ATOM 11 C2' U B 433 -52.966 -70.878 61.011 1.00 8.20 C
ATOM 12 O2' U B 433 -52.067 -71.963 61.195 1.00 8.20 O
ATOM 13 C1' U B 433 -52.570 -69.664 61.845 1.00 8.20 C
ATOM 14 N1 U B 433 -53.092 -69.719 63.206 1.00 8.34 N
ATOM 15 C2 U B 433 -52.207 -69.450 64.204 1.00 8.34 C
ATOM 16 O2 U B 433 -51.066 -69.123 63.986 1.00 8.34 O
ATOM 17 N3 U B 433 -52.701 -69.560 65.458 1.00 8.34 N
ATOM 18 C4 U B 433 -53.977 -69.917 65.799 1.00 8.34 C
ATOM 19 O4 U B 433 -54.253 -69.966 67.006 1.00 8.34 O
ATOM 20 C5 U B 433 -54.855 -70.198 64.693 1.00 8.34 C
ATOM 21 C6 U B 433 -54.383 -70.101 63.454 1.00 8.34 C
ATOM 22 P C B 434 -51.552 -69.947 57.460 1.00 8.40 P
ATOM 23 OP1 C B 434 -52.058 -68.535 57.293 1.00 8.40 O
ATOM 24 OP2 C B 434 -52.200 -71.037 56.682 1.00 8.40 O
ATOM 25 O5' C B 434 -49.981 -69.982 57.226 1.00 8.40 O
TER
ATOM 2 P C A 434 -51.552 -69.947 57.460 1.00 8.40 P
ATOM 3 OP1 C A 434 -52.058 -68.535 57.293 1.00 8.40 O
ATOM 4 OP2 C A 434 -52.200 -71.037 56.682 1.00 8.40 O
ATOM 5 O5' C A 434 -49.981 -69.982 57.226 1.00 8.40 O
ATOM 6 C5' C A 434 -49.435 -69.402 56.055 1.00 8.40 C
ATOM 7 C4' C A 434 -48.235 -68.566 56.363 1.00 8.40 C
ATOM 8 O4' C A 434 -48.561 -67.559 57.344 1.00 8.40 O
ATOM 9 C3' C A 434 -47.111 -69.304 57.008 1.00 8.40 C
ATOM 10 O3' C A 434 -46.411 -70.096 56.126 1.00 8.40 O
ATOM 11 C2' C A 434 -46.304 -68.213 57.641 1.00 8.40 C
ATOM 12 O2' C A 434 -45.537 -67.525 56.666 1.00 8.40 O
ATOM 13 C1' C A 434 -47.426 -67.314 58.151 1.00 8.40 C
ATOM 14 N1 C A 434 -47.768 -67.634 59.537 1.00 8.66 N
ATOM 15 C2 C A 434 -46.831 -67.280 60.509 1.00 8.66 C
ATOM 16 O2 C A 434 -45.784 -66.711 60.163 1.00 8.66 O
ATOM 17 N3 C A 434 -47.065 -67.549 61.798 1.00 8.66 N
ATOM 18 C4 C A 434 -48.195 -68.146 62.115 1.00 8.66 C
ATOM 19 N4 C A 434 -48.377 -68.376 63.405 1.00 8.66 N
ATOM 20 C5 C A 434 -49.171 -68.527 61.149 1.00 8.66 C
ATOM 21 C6 C A 434 -48.916 -68.265 59.865 1.00 8.66 C
ATOM 22 P C A 435 -46.399 -71.639 56.429 1.00 14.36 P
ATOM 23 OP1 C A 435 -45.641 -72.280 55.323 1.00 14.36 O
ATOM 24 OP2 C A 435 -47.819 -72.049 56.678 1.00 14.36 O
ATOM 25 O5' C A 435 -45.574 -71.700 57.791 1.00 14.36 O
TER
ATOM 1 O3' C B 432 -57.913 -68.130 60.621 1.00 0.01 O
ATOM 2 P U B 433 -57.271 -69.498 60.139 1.00 8.20 P
ATOM 3 OP1 U B 433 -57.497 -69.570 58.682 1.00 8.20 O
ATOM 4 OP2 U B 433 -57.816 -70.556 60.993 1.00 8.20 O
ATOM 5 O5' U B 433 -55.725 -69.304 60.458 1.00 8.20 O
ATOM 6 C5' U B 433 -54.888 -68.569 59.579 1.00 8.20 C
ATOM 7 C4' U B 433 -53.434 -68.854 59.828 1.00 8.20 C
ATOM 8 O4' U B 433 -53.123 -68.543 61.208 1.00 8.20 O
ATOM 9 C3' U B 433 -53.010 -70.299 59.600 1.00 8.20 C
ATOM 10 O3' U B 433 -51.712 -70.328 59.008 1.00 8.20 O
ATOM 11 C2' U B 433 -52.966 -70.878 61.011 1.00 8.20 C
ATOM 12 O2' U B 433 -52.067 -71.963 61.195 1.00 8.20 O
ATOM 13 C1' U B 433 -52.570 -69.664 61.845 1.00 8.20 C
ATOM 14 N1 U B 433 -53.092 -69.719 63.206 1.00 8.34 N
ATOM 15 C2 U B 433 -52.207 -69.450 64.204 1.00 8.34 C
ATOM 16 O2 U B 433 -51.066 -69.123 63.986 1.00 8.34 O
ATOM 17 N3 U B 433 -52.701 -69.560 65.458 1.00 8.34 N
ATOM 18 C4 U B 433 -53.977 -69.917 65.799 1.00 8.34 C
ATOM 19 O4 U B 433 -54.253 -69.966 67.006 1.00 8.34 O
ATOM 20 C5 U B 433 -54.855 -70.198 64.693 1.00 8.34 C
ATOM 21 C6 U B 433 -54.383 -70.101 63.454 1.00 8.34 C
ATOM 22 P C B 434 -51.552 -69.947 57.460 1.00 8.40 P
ATOM 23 OP1 C B 434 -52.058 -68.535 57.293 1.00 8.40 O
ATOM 24 OP2 C B 434 -52.200 -71.037 56.682 1.00 8.40 O
ATOM 25 O5' C B 434 -49.981 -69.982 57.226 1.00 8.40 O
TER
Atoms:
C2: (-46.831,-67.280,60.509)
OP1: (-52.058,-68.535,57.293)
OP2: (-52.200,-71.037,56.682)
C4: (-48.195,-68.146,62.115)
O5': (-49.981,-69.982,57.226)
C3': (-47.111,-69.304,57.008)
C1': (-47.426,-67.314,58.151)
O4': (-48.561,-67.559,57.344)
C5': (-49.435,-69.402,56.055)
P: (-51.552,-69.947,57.460)
O2: (-45.784,-66.711,60.163)
C4': (-48.235,-68.566,56.363)
C2': (-46.304,-68.213,57.641)
O2': (-45.537,-67.525,56.666)
N1: (-47.768,-67.634,59.537)
N3: (-47.065,-67.549,61.798)
N4: (-48.377,-68.376,63.405)
C6: (-48.916,-68.265,59.865)
C5: (-49.171,-68.527,61.149)
O3': (-46.411,-70.096,56.126)
OP1: (-52.058,-68.535,57.293)
OP2: (-52.200,-71.037,56.682)
C4: (-48.195,-68.146,62.115)
O5': (-49.981,-69.982,57.226)
C3': (-47.111,-69.304,57.008)
C1': (-47.426,-67.314,58.151)
O4': (-48.561,-67.559,57.344)
C5': (-49.435,-69.402,56.055)
P: (-51.552,-69.947,57.460)
O2: (-45.784,-66.711,60.163)
C4': (-48.235,-68.566,56.363)
C2': (-46.304,-68.213,57.641)
O2': (-45.537,-67.525,56.666)
N1: (-47.768,-67.634,59.537)
N3: (-47.065,-67.549,61.798)
N4: (-48.377,-68.376,63.405)
C6: (-48.916,-68.265,59.865)
C5: (-49.171,-68.527,61.149)
O3': (-46.411,-70.096,56.126)
C4: (-53.977,-69.917,65.799)
N3: (-52.701,-69.560,65.458)
OP1: (-57.497,-69.570,58.682)
OP2: (-57.816,-70.556,60.993)
C2: (-52.207,-69.450,64.204)
C1': (-52.570,-69.664,61.845)
C3': (-53.010,-70.299,59.600)
O5': (-55.725,-69.304,60.458)
O4': (-53.123,-68.543,61.208)
C5': (-54.888,-68.569,59.579)
P: (-57.271,-69.498,60.139)
C4': (-53.434,-68.854,59.828)
C2': (-52.966,-70.878,61.011)
O2': (-52.067,-71.963,61.195)
N1: (-53.092,-69.719,63.206)
O4: (-54.253,-69.966,67.006)
O2: (-51.066,-69.123,63.986)
C6: (-54.383,-70.101,63.454)
C5: (-54.855,-70.198,64.693)
O3': (-51.712,-70.328,59.008)
N3: (-52.701,-69.560,65.458)
OP1: (-57.497,-69.570,58.682)
OP2: (-57.816,-70.556,60.993)
C2: (-52.207,-69.450,64.204)
C1': (-52.570,-69.664,61.845)
C3': (-53.010,-70.299,59.600)
O5': (-55.725,-69.304,60.458)
O4': (-53.123,-68.543,61.208)
C5': (-54.888,-68.569,59.579)
P: (-57.271,-69.498,60.139)
C4': (-53.434,-68.854,59.828)
C2': (-52.966,-70.878,61.011)
O2': (-52.067,-71.963,61.195)
N1: (-53.092,-69.719,63.206)
O4: (-54.253,-69.966,67.006)
O2: (-51.066,-69.123,63.986)
C6: (-54.383,-70.101,63.454)
C5: (-54.855,-70.198,64.693)
O3': (-51.712,-70.328,59.008)
Image (generated by PyMOL):