Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52562:52560
Extra
PDB:
ATOM 1 O3' A A2561 162.711 -1.251 222.854 1.00 39.40 O
ATOM 2 P C A2562 162.817 -2.089 221.534 1.00 40.33 P
ATOM 3 OP1 C A2562 162.482 -3.490 221.893 1.00 40.35 O
ATOM 4 OP2 C A2562 164.132 -1.772 220.924 1.00 40.50 O
ATOM 5 O5' C A2562 161.671 -1.474 220.656 1.00 40.39 O
ATOM 6 C5' C A2562 161.718 -0.119 220.300 1.00 40.38 C
ATOM 7 C4' C A2562 160.680 0.192 219.317 1.00 40.50 C
ATOM 8 O4' C A2562 160.728 -0.773 218.249 1.00 40.77 O
ATOM 9 C3' C A2562 159.266 0.074 219.820 1.00 40.35 C
ATOM 10 O3' C A2562 158.890 1.185 220.597 1.00 40.13 O
ATOM 11 C2' C A2562 158.499 -0.050 218.522 1.00 40.58 C
ATOM 12 O2' C A2562 158.469 1.206 217.884 1.00 40.64 O
ATOM 13 C1' C A2562 159.433 -0.944 217.723 1.00 40.84 C
ATOM 14 N1 C A2562 159.072 -2.338 217.850 1.00 40.89 N
ATOM 15 C2 C A2562 158.088 -2.782 216.991 1.00 41.06 C
ATOM 16 O2 C A2562 157.633 -1.970 216.190 1.00 41.16 O
ATOM 17 N3 C A2562 157.663 -4.057 217.059 1.00 41.13 N
ATOM 18 C4 C A2562 158.217 -4.879 217.960 1.00 41.03 C
ATOM 19 N4 C A2562 157.803 -6.158 218.018 1.00 41.12 N
ATOM 20 C5 C A2562 159.217 -4.418 218.860 1.00 40.85 C
ATOM 21 C6 C A2562 159.633 -3.154 218.774 1.00 40.79 C
ATOM 22 P C A2563 157.413 1.298 221.139 1.00 40.24 P
ATOM 23 OP1 C A2563 156.588 1.722 220.020 1.00 40.40 O
ATOM 24 OP2 C A2563 157.432 2.126 222.343 1.00 39.98 O
ATOM 25 O5' C A2563 157.103 -0.197 221.532 1.00 40.24 O
TER
ATOM 1 O3' U B2559 163.357 -9.109 226.286 1.00 36.07 O
ATOM 2 P U B2560 162.147 -8.415 227.054 1.00 29.99 P
ATOM 3 OP1 U B2560 162.726 -7.623 228.154 1.00 29.77 O
ATOM 4 OP2 U B2560 161.174 -9.461 227.401 1.00 29.99 O
ATOM 5 O5' U B2560 161.544 -7.461 225.947 1.00 30.04 O
ATOM 6 C5' U B2560 162.338 -6.459 225.359 1.00 30.08 C
ATOM 7 C4' U B2560 161.665 -5.870 224.170 1.00 30.19 C
ATOM 8 O4' U B2560 161.500 -6.885 223.165 1.00 30.45 O
ATOM 9 C3' U B2560 160.269 -5.363 224.403 1.00 30.05 C
ATOM 10 O3' U B2560 160.290 -4.079 224.966 1.00 29.85 O
ATOM 11 C2' U B2560 159.656 -5.417 223.007 1.00 30.27 C
ATOM 12 O2' U B2560 160.042 -4.289 222.267 1.00 30.32 O
ATOM 13 C1' U B2560 160.352 -6.635 222.405 1.00 30.51 C
ATOM 14 N1 U B2560 159.519 -7.831 222.460 1.00 30.58 N
ATOM 15 C2 U B2560 158.706 -8.212 221.384 1.00 30.78 C
ATOM 16 O2 U B2560 158.627 -7.565 220.338 1.00 30.91 O
ATOM 17 N3 U B2560 157.981 -9.370 221.626 1.00 30.83 N
ATOM 18 C4 U B2560 158.016 -10.122 222.777 1.00 30.70 C
ATOM 19 O4 U B2560 157.342 -11.105 222.910 1.00 30.77 O
ATOM 20 C5 U B2560 158.863 -9.667 223.816 1.00 30.50 C
ATOM 21 C6 U B2560 159.585 -8.568 223.624 1.00 30.45 C
ATOM 22 P A B2561 158.994 -3.417 225.592 1.00 38.92 P
ATOM 23 OP1 A B2561 159.068 -3.590 227.043 1.00 38.71 O
ATOM 24 OP2 A B2561 157.835 -3.952 224.873 1.00 39.04 O
ATOM 25 O5' A B2561 159.201 -1.925 225.212 1.00 38.89 O
TER
ATOM 2 P C A2562 162.817 -2.089 221.534 1.00 40.33 P
ATOM 3 OP1 C A2562 162.482 -3.490 221.893 1.00 40.35 O
ATOM 4 OP2 C A2562 164.132 -1.772 220.924 1.00 40.50 O
ATOM 5 O5' C A2562 161.671 -1.474 220.656 1.00 40.39 O
ATOM 6 C5' C A2562 161.718 -0.119 220.300 1.00 40.38 C
ATOM 7 C4' C A2562 160.680 0.192 219.317 1.00 40.50 C
ATOM 8 O4' C A2562 160.728 -0.773 218.249 1.00 40.77 O
ATOM 9 C3' C A2562 159.266 0.074 219.820 1.00 40.35 C
ATOM 10 O3' C A2562 158.890 1.185 220.597 1.00 40.13 O
ATOM 11 C2' C A2562 158.499 -0.050 218.522 1.00 40.58 C
ATOM 12 O2' C A2562 158.469 1.206 217.884 1.00 40.64 O
ATOM 13 C1' C A2562 159.433 -0.944 217.723 1.00 40.84 C
ATOM 14 N1 C A2562 159.072 -2.338 217.850 1.00 40.89 N
ATOM 15 C2 C A2562 158.088 -2.782 216.991 1.00 41.06 C
ATOM 16 O2 C A2562 157.633 -1.970 216.190 1.00 41.16 O
ATOM 17 N3 C A2562 157.663 -4.057 217.059 1.00 41.13 N
ATOM 18 C4 C A2562 158.217 -4.879 217.960 1.00 41.03 C
ATOM 19 N4 C A2562 157.803 -6.158 218.018 1.00 41.12 N
ATOM 20 C5 C A2562 159.217 -4.418 218.860 1.00 40.85 C
ATOM 21 C6 C A2562 159.633 -3.154 218.774 1.00 40.79 C
ATOM 22 P C A2563 157.413 1.298 221.139 1.00 40.24 P
ATOM 23 OP1 C A2563 156.588 1.722 220.020 1.00 40.40 O
ATOM 24 OP2 C A2563 157.432 2.126 222.343 1.00 39.98 O
ATOM 25 O5' C A2563 157.103 -0.197 221.532 1.00 40.24 O
TER
ATOM 1 O3' U B2559 163.357 -9.109 226.286 1.00 36.07 O
ATOM 2 P U B2560 162.147 -8.415 227.054 1.00 29.99 P
ATOM 3 OP1 U B2560 162.726 -7.623 228.154 1.00 29.77 O
ATOM 4 OP2 U B2560 161.174 -9.461 227.401 1.00 29.99 O
ATOM 5 O5' U B2560 161.544 -7.461 225.947 1.00 30.04 O
ATOM 6 C5' U B2560 162.338 -6.459 225.359 1.00 30.08 C
ATOM 7 C4' U B2560 161.665 -5.870 224.170 1.00 30.19 C
ATOM 8 O4' U B2560 161.500 -6.885 223.165 1.00 30.45 O
ATOM 9 C3' U B2560 160.269 -5.363 224.403 1.00 30.05 C
ATOM 10 O3' U B2560 160.290 -4.079 224.966 1.00 29.85 O
ATOM 11 C2' U B2560 159.656 -5.417 223.007 1.00 30.27 C
ATOM 12 O2' U B2560 160.042 -4.289 222.267 1.00 30.32 O
ATOM 13 C1' U B2560 160.352 -6.635 222.405 1.00 30.51 C
ATOM 14 N1 U B2560 159.519 -7.831 222.460 1.00 30.58 N
ATOM 15 C2 U B2560 158.706 -8.212 221.384 1.00 30.78 C
ATOM 16 O2 U B2560 158.627 -7.565 220.338 1.00 30.91 O
ATOM 17 N3 U B2560 157.981 -9.370 221.626 1.00 30.83 N
ATOM 18 C4 U B2560 158.016 -10.122 222.777 1.00 30.70 C
ATOM 19 O4 U B2560 157.342 -11.105 222.910 1.00 30.77 O
ATOM 20 C5 U B2560 158.863 -9.667 223.816 1.00 30.50 C
ATOM 21 C6 U B2560 159.585 -8.568 223.624 1.00 30.45 C
ATOM 22 P A B2561 158.994 -3.417 225.592 1.00 38.92 P
ATOM 23 OP1 A B2561 159.068 -3.590 227.043 1.00 38.71 O
ATOM 24 OP2 A B2561 157.835 -3.952 224.873 1.00 39.04 O
ATOM 25 O5' A B2561 159.201 -1.925 225.212 1.00 38.89 O
TER
Atoms:
C2: (158.088,-2.782,216.991)
OP1: (162.482,-3.490,221.893)
OP2: (164.132,-1.772,220.924)
C4: (158.217,-4.879,217.960)
O5': (161.671,-1.474,220.656)
C3': (159.266,0.074,219.820)
C1': (159.433,-0.944,217.723)
O4': (160.728,-0.773,218.249)
C5': (161.718,-0.119,220.300)
P: (162.817,-2.089,221.534)
O2: (157.633,-1.970,216.190)
C4': (160.680,0.192,219.317)
C2': (158.499,-0.050,218.522)
O2': (158.469,1.206,217.884)
N1: (159.072,-2.338,217.850)
N3: (157.663,-4.057,217.059)
N4: (157.803,-6.158,218.018)
C6: (159.633,-3.154,218.774)
C5: (159.217,-4.418,218.860)
O3': (158.890,1.185,220.597)
OP1: (162.482,-3.490,221.893)
OP2: (164.132,-1.772,220.924)
C4: (158.217,-4.879,217.960)
O5': (161.671,-1.474,220.656)
C3': (159.266,0.074,219.820)
C1': (159.433,-0.944,217.723)
O4': (160.728,-0.773,218.249)
C5': (161.718,-0.119,220.300)
P: (162.817,-2.089,221.534)
O2: (157.633,-1.970,216.190)
C4': (160.680,0.192,219.317)
C2': (158.499,-0.050,218.522)
O2': (158.469,1.206,217.884)
N1: (159.072,-2.338,217.850)
N3: (157.663,-4.057,217.059)
N4: (157.803,-6.158,218.018)
C6: (159.633,-3.154,218.774)
C5: (159.217,-4.418,218.860)
O3': (158.890,1.185,220.597)
C4: (158.016,-10.122,222.777)
N3: (157.981,-9.370,221.626)
OP1: (162.726,-7.623,228.154)
OP2: (161.174,-9.461,227.401)
C2: (158.706,-8.212,221.384)
C1': (160.352,-6.635,222.405)
C3': (160.269,-5.363,224.403)
O5': (161.544,-7.461,225.947)
O4': (161.500,-6.885,223.165)
C5': (162.338,-6.459,225.359)
P: (162.147,-8.415,227.054)
C4': (161.665,-5.870,224.170)
C2': (159.656,-5.417,223.007)
O2': (160.042,-4.289,222.267)
N1: (159.519,-7.831,222.460)
O4: (157.342,-11.105,222.910)
O2: (158.627,-7.565,220.338)
C6: (159.585,-8.568,223.624)
C5: (158.863,-9.667,223.816)
O3': (160.290,-4.079,224.966)
N3: (157.981,-9.370,221.626)
OP1: (162.726,-7.623,228.154)
OP2: (161.174,-9.461,227.401)
C2: (158.706,-8.212,221.384)
C1': (160.352,-6.635,222.405)
C3': (160.269,-5.363,224.403)
O5': (161.544,-7.461,225.947)
O4': (161.500,-6.885,223.165)
C5': (162.338,-6.459,225.359)
P: (162.147,-8.415,227.054)
C4': (161.665,-5.870,224.170)
C2': (159.656,-5.417,223.007)
O2': (160.042,-4.289,222.267)
N1: (159.519,-7.831,222.460)
O4: (157.342,-11.105,222.910)
O2: (158.627,-7.565,220.338)
C6: (159.585,-8.568,223.624)
C5: (158.863,-9.667,223.816)
O3': (160.290,-4.079,224.966)
Image (generated by PyMOL):