ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2CKY:B33:B35

Extra

PDB:
ATOM 1 O3' A A 32 0.179 -20.952 -75.939 1.00 52.42 O
ATOM 2 P G A 33 -0.613 -20.575 -74.602 1.00 57.88 P
ATOM 3 OP1 G A 33 0.355 -20.562 -73.474 1.00 57.65 O
ATOM 4 OP2 G A 33 -1.875 -21.372 -74.620 1.00 57.96 O
ATOM 5 O5' G A 33 -1.004 -19.044 -74.797 1.00 58.38 O
ATOM 6 C5' G A 33 -1.006 -18.104 -73.721 1.00 59.82 C
ATOM 7 C4' G A 33 -1.471 -16.790 -74.313 1.00 59.33 C
ATOM 8 O4' G A 33 -1.057 -16.785 -75.703 1.00 56.66 O
ATOM 9 C3' G A 33 -2.975 -16.587 -74.431 1.00 60.51 C
ATOM 10 O3' G A 33 -3.587 -16.100 -73.253 1.00 63.55 O
ATOM 11 C2' G A 33 -3.072 -15.535 -75.522 1.00 58.79 C
ATOM 12 O2' G A 33 -2.990 -14.228 -74.996 1.00 60.47 O
ATOM 13 C1' G A 33 -1.848 -15.831 -76.383 1.00 55.42 C
ATOM 14 N9 G A 33 -2.119 -16.239 -77.756 1.00 53.07 N
ATOM 15 C8 G A 33 -1.199 -16.068 -78.753 1.00 51.44 C
ATOM 16 N7 G A 33 -1.595 -16.459 -79.919 1.00 50.56 N
ATOM 17 C5 G A 33 -2.887 -16.915 -79.686 1.00 52.15 C
ATOM 18 C6 G A 33 -3.823 -17.466 -80.610 1.00 52.36 C
ATOM 19 O6 G A 33 -3.677 -17.649 -81.831 1.00 50.54 O
ATOM 20 N1 G A 33 -5.024 -17.814 -79.994 1.00 53.46 N
ATOM 21 C2 G A 33 -5.273 -17.642 -78.654 1.00 54.55 C
ATOM 22 N2 G A 33 -6.490 -18.041 -78.273 1.00 56.53 N
ATOM 23 N3 G A 33 -4.409 -17.128 -77.774 1.00 53.76 N
ATOM 24 C4 G A 33 -3.233 -16.788 -78.352 1.00 52.75 C
ATOM 25 P U A 34 -5.192 -16.140 -73.174 1.00 66.81 P
ATOM 26 OP1 U A 34 -5.546 -15.549 -71.861 1.00 68.62 O
ATOM 27 OP2 U A 34 -5.661 -17.498 -73.561 1.00 65.67 O
ATOM 28 O5' U A 34 -5.717 -15.121 -74.292 1.00 65.51 O
TER

ATOM 1 O3' U B 34 -5.658 -12.248 -75.495 1.00 59.76 O
ATOM 2 P C B 35 -4.670 -11.174 -76.142 1.00 57.90 P
ATOM 3 OP1 C B 35 -3.542 -11.018 -75.201 1.00 56.78 O
ATOM 4 OP2 C B 35 -5.470 -10.021 -76.608 1.00 58.56 O
ATOM 5 O5' C B 35 -4.023 -11.850 -77.438 1.00 54.36 O
ATOM 6 C5' C B 35 -2.659 -11.524 -77.722 1.00 51.21 C
ATOM 7 C4' C B 35 -2.224 -11.937 -79.117 1.00 47.97 C
ATOM 8 O4' C B 35 -2.547 -13.336 -79.325 1.00 48.18 O
ATOM 9 C3' C B 35 -2.887 -11.217 -80.283 1.00 45.73 C
ATOM 10 O3' C B 35 -2.268 -9.953 -80.532 1.00 40.45 O
ATOM 11 C2' C B 35 -2.678 -12.242 -81.393 1.00 45.22 C
ATOM 12 O2' C B 35 -1.349 -12.250 -81.876 1.00 44.97 O
ATOM 13 C1' C B 35 -2.930 -13.562 -80.669 1.00 46.06 C
ATOM 14 N1 C B 35 -4.316 -14.140 -80.654 1.00 46.63 N
ATOM 15 C2 C B 35 -4.912 -14.600 -81.844 1.00 46.85 C
ATOM 16 O2 C B 35 -4.311 -14.493 -82.920 1.00 46.42 O
ATOM 17 N3 C B 35 -6.157 -15.152 -81.805 1.00 47.49 N
ATOM 18 C4 C B 35 -6.802 -15.272 -80.647 1.00 49.07 C
ATOM 19 N4 C B 35 -8.022 -15.814 -80.663 1.00 49.95 N
ATOM 20 C5 C B 35 -6.211 -14.826 -79.420 1.00 50.14 C
ATOM 21 C6 C B 35 -4.984 -14.281 -79.465 1.00 48.46 C
ATOM 22 P C B 36 -3.168 -8.733 -81.041 1.00 39.42 P
ATOM 23 OP1 C B 36 -2.299 -7.542 -81.213 1.00 37.62 O
ATOM 24 OP2 C B 36 -4.368 -8.589 -80.182 1.00 39.25 O
ATOM 25 O5' C B 36 -3.634 -9.337 -82.457 1.00 36.17 O
TER

Atoms:
OP1: (0.355,-20.562,-73.474)
OP2: (-1.875,-21.372,-74.620)
C3': (-2.975,-16.587,-74.431)
C1': (-1.848,-15.831,-76.383)
C5': (-1.006,-18.104,-73.721)
O6: (-3.677,-17.649,-81.831)
O4': (-1.057,-16.785,-75.703)
C8: (-1.199,-16.068,-78.753)
C2: (-5.273,-17.642,-78.654)
C6: (-3.823,-17.466,-80.610)
C5: (-2.887,-16.915,-79.686)
C4: (-3.233,-16.788,-78.352)
P: (-0.613,-20.575,-74.602)
C4': (-1.471,-16.790,-74.313)
C2': (-3.072,-15.535,-75.522)
O2': (-2.990,-14.228,-74.996)
N1: (-5.024,-17.814,-79.994)
N2: (-6.490,-18.041,-78.273)
N3: (-4.409,-17.128,-77.774)
N7: (-1.595,-16.459,-79.919)
N9: (-2.119,-16.239,-77.756)
O5': (-1.004,-19.044,-74.797)
O3': (-3.587,-16.100,-73.253)
C2: (-4.912,-14.600,-81.844)
OP1: (-3.542,-11.018,-75.201)
OP2: (-5.470,-10.021,-76.608)
C4: (-6.802,-15.272,-80.647)
O5': (-4.023,-11.850,-77.438)
C3': (-2.887,-11.217,-80.283)
C1': (-2.930,-13.562,-80.669)
O4': (-2.547,-13.336,-79.325)
C5': (-2.659,-11.524,-77.722)
P: (-4.670,-11.174,-76.142)
O2: (-4.311,-14.493,-82.920)
C4': (-2.224,-11.937,-79.117)
C2': (-2.678,-12.242,-81.393)
O2': (-1.349,-12.250,-81.876)
N1: (-4.316,-14.140,-80.654)
N3: (-6.157,-15.152,-81.805)
N4: (-8.022,-15.814,-80.663)
C6: (-4.984,-14.281,-79.465)
C5: (-6.211,-14.826,-79.420)
O3': (-2.268,-9.953,-80.532)
Image (generated by PyMOL):
PyMOL image
show in jmol