Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01018:01086
Extra
PDB:
ATOM 1 O3' A A1017 54.509 97.675 109.867 1.00 49.98 O
ATOM 2 P G A1018 53.279 96.684 110.205 1.00 54.40 P
ATOM 3 OP1 G A1018 52.764 97.077 111.550 1.00 53.53 O
ATOM 4 OP2 G A1018 53.669 95.265 109.937 1.00 52.16 O
ATOM 5 O5' G A1018 52.172 97.066 109.127 1.00 54.64 O
ATOM 6 C5' G A1018 51.610 98.384 109.086 1.00 51.24 C
ATOM 7 C4' G A1018 51.673 98.917 107.682 1.00 49.52 C
ATOM 8 O4' G A1018 51.059 100.233 107.658 1.00 48.73 O
ATOM 9 C3' G A1018 53.088 99.098 107.141 1.00 49.85 C
ATOM 10 O3' G A1018 53.084 98.916 105.717 1.00 49.93 O
ATOM 11 C2' G A1018 53.373 100.552 107.503 1.00 49.25 C
ATOM 12 O2' G A1018 54.378 101.105 106.686 1.00 52.54 O
ATOM 13 C1' G A1018 52.008 101.186 107.233 1.00 46.76 C
ATOM 14 N9 G A1018 51.701 102.463 107.875 1.00 43.74 N
ATOM 15 C8 G A1018 52.367 103.074 108.908 1.00 43.28 C
ATOM 16 N7 G A1018 51.855 104.229 109.236 1.00 41.29 N
ATOM 17 C5 G A1018 50.785 104.391 108.370 1.00 38.99 C
ATOM 18 C6 G A1018 49.874 105.459 108.237 1.00 39.40 C
ATOM 19 O6 G A1018 49.828 106.514 108.872 1.00 39.67 O
ATOM 20 N1 G A1018 48.945 105.218 107.232 1.00 39.75 N
ATOM 21 C2 G A1018 48.900 104.093 106.453 1.00 40.01 C
ATOM 22 N2 G A1018 47.919 104.049 105.536 1.00 38.77 N
ATOM 23 N3 G A1018 49.752 103.089 106.563 1.00 38.94 N
ATOM 24 C4 G A1018 50.664 103.306 107.534 1.00 40.76 C
ATOM 25 P C A1019 54.014 97.781 105.037 1.00 49.27 P
ATOM 26 OP1 C A1019 53.582 97.630 103.620 1.00 53.25 O
ATOM 27 OP2 C A1019 54.059 96.592 105.906 1.00 52.07 O
ATOM 28 O5' C A1019 55.460 98.444 104.985 1.00 51.07 O
TER
ATOM 1 O3' C B1085 45.615 98.200 111.598 1.00 58.08 O
ATOM 2 P C B1086 47.074 98.167 110.928 1.00 57.82 P
ATOM 3 OP1 C B1086 46.963 98.874 109.627 1.00 59.23 O
ATOM 4 OP2 C B1086 47.587 96.771 110.966 1.00 59.10 O
ATOM 5 O5' C B1086 47.949 99.062 111.908 1.00 56.45 O
ATOM 6 C5' C B1086 49.304 98.725 112.228 1.00 52.86 C
ATOM 7 C4' C B1086 50.047 99.976 112.609 1.00 55.08 C
ATOM 8 O4' C B1086 50.228 100.789 111.420 1.00 55.32 O
ATOM 9 C3' C B1086 49.300 100.874 113.585 1.00 56.37 C
ATOM 10 O3' C B1086 49.550 100.495 114.942 1.00 57.23 O
ATOM 11 C2' C B1086 49.875 102.248 113.269 1.00 56.15 C
ATOM 12 O2' C B1086 51.121 102.468 113.898 1.00 60.26 O
ATOM 13 C1' C B1086 50.085 102.157 111.751 1.00 54.71 C
ATOM 14 N1 C B1086 48.999 102.731 110.928 1.00 53.28 N
ATOM 15 C2 C B1086 48.611 104.057 111.149 1.00 53.16 C
ATOM 16 O2 C B1086 49.190 104.716 112.028 1.00 56.83 O
ATOM 17 N3 C B1086 47.622 104.590 110.398 1.00 51.59 N
ATOM 18 C4 C B1086 47.038 103.862 109.449 1.00 50.44 C
ATOM 19 N4 C B1086 46.082 104.440 108.725 1.00 49.29 N
ATOM 20 C5 C B1086 47.410 102.511 109.200 1.00 51.32 C
ATOM 21 C6 C B1086 48.382 101.988 109.958 1.00 52.86 C
ATOM 22 P U B1087 48.325 100.168 115.936 1.00 57.40 P
ATOM 23 OP1 U B1087 48.875 100.146 117.313 1.00 58.98 O
ATOM 24 OP2 U B1087 47.614 98.972 115.418 1.00 55.73 O
ATOM 25 O5' U B1087 47.363 101.431 115.810 1.00 55.98 O
TER
ATOM 2 P G A1018 53.279 96.684 110.205 1.00 54.40 P
ATOM 3 OP1 G A1018 52.764 97.077 111.550 1.00 53.53 O
ATOM 4 OP2 G A1018 53.669 95.265 109.937 1.00 52.16 O
ATOM 5 O5' G A1018 52.172 97.066 109.127 1.00 54.64 O
ATOM 6 C5' G A1018 51.610 98.384 109.086 1.00 51.24 C
ATOM 7 C4' G A1018 51.673 98.917 107.682 1.00 49.52 C
ATOM 8 O4' G A1018 51.059 100.233 107.658 1.00 48.73 O
ATOM 9 C3' G A1018 53.088 99.098 107.141 1.00 49.85 C
ATOM 10 O3' G A1018 53.084 98.916 105.717 1.00 49.93 O
ATOM 11 C2' G A1018 53.373 100.552 107.503 1.00 49.25 C
ATOM 12 O2' G A1018 54.378 101.105 106.686 1.00 52.54 O
ATOM 13 C1' G A1018 52.008 101.186 107.233 1.00 46.76 C
ATOM 14 N9 G A1018 51.701 102.463 107.875 1.00 43.74 N
ATOM 15 C8 G A1018 52.367 103.074 108.908 1.00 43.28 C
ATOM 16 N7 G A1018 51.855 104.229 109.236 1.00 41.29 N
ATOM 17 C5 G A1018 50.785 104.391 108.370 1.00 38.99 C
ATOM 18 C6 G A1018 49.874 105.459 108.237 1.00 39.40 C
ATOM 19 O6 G A1018 49.828 106.514 108.872 1.00 39.67 O
ATOM 20 N1 G A1018 48.945 105.218 107.232 1.00 39.75 N
ATOM 21 C2 G A1018 48.900 104.093 106.453 1.00 40.01 C
ATOM 22 N2 G A1018 47.919 104.049 105.536 1.00 38.77 N
ATOM 23 N3 G A1018 49.752 103.089 106.563 1.00 38.94 N
ATOM 24 C4 G A1018 50.664 103.306 107.534 1.00 40.76 C
ATOM 25 P C A1019 54.014 97.781 105.037 1.00 49.27 P
ATOM 26 OP1 C A1019 53.582 97.630 103.620 1.00 53.25 O
ATOM 27 OP2 C A1019 54.059 96.592 105.906 1.00 52.07 O
ATOM 28 O5' C A1019 55.460 98.444 104.985 1.00 51.07 O
TER
ATOM 1 O3' C B1085 45.615 98.200 111.598 1.00 58.08 O
ATOM 2 P C B1086 47.074 98.167 110.928 1.00 57.82 P
ATOM 3 OP1 C B1086 46.963 98.874 109.627 1.00 59.23 O
ATOM 4 OP2 C B1086 47.587 96.771 110.966 1.00 59.10 O
ATOM 5 O5' C B1086 47.949 99.062 111.908 1.00 56.45 O
ATOM 6 C5' C B1086 49.304 98.725 112.228 1.00 52.86 C
ATOM 7 C4' C B1086 50.047 99.976 112.609 1.00 55.08 C
ATOM 8 O4' C B1086 50.228 100.789 111.420 1.00 55.32 O
ATOM 9 C3' C B1086 49.300 100.874 113.585 1.00 56.37 C
ATOM 10 O3' C B1086 49.550 100.495 114.942 1.00 57.23 O
ATOM 11 C2' C B1086 49.875 102.248 113.269 1.00 56.15 C
ATOM 12 O2' C B1086 51.121 102.468 113.898 1.00 60.26 O
ATOM 13 C1' C B1086 50.085 102.157 111.751 1.00 54.71 C
ATOM 14 N1 C B1086 48.999 102.731 110.928 1.00 53.28 N
ATOM 15 C2 C B1086 48.611 104.057 111.149 1.00 53.16 C
ATOM 16 O2 C B1086 49.190 104.716 112.028 1.00 56.83 O
ATOM 17 N3 C B1086 47.622 104.590 110.398 1.00 51.59 N
ATOM 18 C4 C B1086 47.038 103.862 109.449 1.00 50.44 C
ATOM 19 N4 C B1086 46.082 104.440 108.725 1.00 49.29 N
ATOM 20 C5 C B1086 47.410 102.511 109.200 1.00 51.32 C
ATOM 21 C6 C B1086 48.382 101.988 109.958 1.00 52.86 C
ATOM 22 P U B1087 48.325 100.168 115.936 1.00 57.40 P
ATOM 23 OP1 U B1087 48.875 100.146 117.313 1.00 58.98 O
ATOM 24 OP2 U B1087 47.614 98.972 115.418 1.00 55.73 O
ATOM 25 O5' U B1087 47.363 101.431 115.810 1.00 55.98 O
TER
Atoms:
OP1: (52.764,97.077,111.550)
OP2: (53.669,95.265,109.937)
C3': (53.088,99.098,107.141)
C1': (52.008,101.186,107.233)
C5': (51.610,98.384,109.086)
O6: (49.828,106.514,108.872)
O4': (51.059,100.233,107.658)
C8: (52.367,103.074,108.908)
C2: (48.900,104.093,106.453)
C6: (49.874,105.459,108.237)
C5: (50.785,104.391,108.370)
C4: (50.664,103.306,107.534)
P: (53.279,96.684,110.205)
C4': (51.673,98.917,107.682)
C2': (53.373,100.552,107.503)
O2': (54.378,101.105,106.686)
N1: (48.945,105.218,107.232)
N2: (47.919,104.049,105.536)
N3: (49.752,103.089,106.563)
N7: (51.855,104.229,109.236)
N9: (51.701,102.463,107.875)
O5': (52.172,97.066,109.127)
O3': (53.084,98.916,105.717)
OP2: (53.669,95.265,109.937)
C3': (53.088,99.098,107.141)
C1': (52.008,101.186,107.233)
C5': (51.610,98.384,109.086)
O6: (49.828,106.514,108.872)
O4': (51.059,100.233,107.658)
C8: (52.367,103.074,108.908)
C2: (48.900,104.093,106.453)
C6: (49.874,105.459,108.237)
C5: (50.785,104.391,108.370)
C4: (50.664,103.306,107.534)
P: (53.279,96.684,110.205)
C4': (51.673,98.917,107.682)
C2': (53.373,100.552,107.503)
O2': (54.378,101.105,106.686)
N1: (48.945,105.218,107.232)
N2: (47.919,104.049,105.536)
N3: (49.752,103.089,106.563)
N7: (51.855,104.229,109.236)
N9: (51.701,102.463,107.875)
O5': (52.172,97.066,109.127)
O3': (53.084,98.916,105.717)
C2: (48.611,104.057,111.149)
OP1: (46.963,98.874,109.627)
OP2: (47.587,96.771,110.966)
C4: (47.038,103.862,109.449)
O5': (47.949,99.062,111.908)
C3': (49.300,100.874,113.585)
C1': (50.085,102.157,111.751)
O4': (50.228,100.789,111.420)
C5': (49.304,98.725,112.228)
P: (47.074,98.167,110.928)
O2: (49.190,104.716,112.028)
C4': (50.047,99.976,112.609)
C2': (49.875,102.248,113.269)
O2': (51.121,102.468,113.898)
N1: (48.999,102.731,110.928)
N3: (47.622,104.590,110.398)
N4: (46.082,104.440,108.725)
C6: (48.382,101.988,109.958)
C5: (47.410,102.511,109.200)
O3': (49.550,100.495,114.942)
OP1: (46.963,98.874,109.627)
OP2: (47.587,96.771,110.966)
C4: (47.038,103.862,109.449)
O5': (47.949,99.062,111.908)
C3': (49.300,100.874,113.585)
C1': (50.085,102.157,111.751)
O4': (50.228,100.789,111.420)
C5': (49.304,98.725,112.228)
P: (47.074,98.167,110.928)
O2: (49.190,104.716,112.028)
C4': (50.047,99.976,112.609)
C2': (49.875,102.248,113.269)
O2': (51.121,102.468,113.898)
N1: (48.999,102.731,110.928)
N3: (47.622,104.590,110.398)
N4: (46.082,104.440,108.725)
C6: (48.382,101.988,109.958)
C5: (47.410,102.511,109.200)
O3': (49.550,100.495,114.942)
Image (generated by PyMOL):