Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:B21:B47
Extra
PDB:
ATOM 1 O3' A A 20 6.341 -11.334 -20.293 1.00 60.37 O
ATOM 2 P A A 21 5.113 -11.789 -21.221 1.00 55.12 P
ATOM 3 OP1 A A 21 5.210 -13.265 -21.367 1.00 55.19 O
ATOM 4 OP2 A A 21 5.152 -10.949 -22.438 1.00 40.40 O
ATOM 5 O5' A A 21 3.825 -11.402 -20.348 1.00 61.96 O
ATOM 6 C5' A A 21 3.555 -12.045 -19.107 1.00 50.58 C
ATOM 7 C4' A A 21 2.099 -11.927 -18.691 1.00 42.99 C
ATOM 8 O4' A A 21 1.781 -10.547 -18.362 1.00 38.68 O
ATOM 9 C3' A A 21 1.059 -12.369 -19.720 1.00 39.93 C
ATOM 10 O3' A A 21 0.035 -13.099 -19.061 1.00 38.71 O
ATOM 11 C2' A A 21 0.477 -11.049 -20.209 1.00 39.56 C
ATOM 12 O2' A A 21 -0.846 -11.135 -20.676 1.00 51.44 O
ATOM 13 C1' A A 21 0.556 -10.206 -18.958 1.00 32.26 C
ATOM 14 N9 A A 21 0.549 -8.781 -19.228 1.00 31.40 N
ATOM 15 C8 A A 21 1.611 -8.020 -19.592 1.00 32.75 C
ATOM 16 N7 A A 21 1.311 -6.767 -19.782 1.00 29.99 N
ATOM 17 C5 A A 21 -0.043 -6.715 -19.565 1.00 30.71 C
ATOM 18 C6 A A 21 -0.943 -5.643 -19.636 1.00 36.35 C
ATOM 19 N6 A A 21 -0.551 -4.400 -19.971 1.00 25.43 N
ATOM 20 N1 A A 21 -2.247 -5.907 -19.325 1.00 39.19 N
ATOM 21 C2 A A 21 -2.585 -7.170 -18.994 1.00 36.16 C
ATOM 22 N3 A A 21 -1.816 -8.261 -18.916 1.00 35.35 N
ATOM 23 C4 A A 21 -0.538 -7.956 -19.217 1.00 32.95 C
ATOM 24 P U A 22 -0.002 -14.696 -19.159 1.00 81.16 P
ATOM 25 OP1 U A 22 1.329 -15.135 -19.667 1.00 72.86 O
ATOM 26 OP2 U A 22 -1.221 -15.051 -19.931 1.00 81.51 O
ATOM 27 O5' U A 22 -0.178 -15.146 -17.640 1.00 85.79 O
TER
ATOM 1 O3' C B 46 -6.848 1.878 -17.902 1.00 67.76 O
ATOM 2 P C B 47 -6.655 1.335 -19.400 1.00 61.02 P
ATOM 3 OP1 C B 47 -7.232 2.355 -20.319 1.00 50.27 O
ATOM 4 OP2 C B 47 -7.191 -0.052 -19.443 1.00 66.24 O
ATOM 5 O5' C B 47 -5.073 1.309 -19.546 1.00 53.06 O
ATOM 6 C5' C B 47 -4.225 1.435 -18.405 1.00 47.47 C
ATOM 7 C4' C B 47 -2.986 0.610 -18.572 1.00 52.61 C
ATOM 8 O4' C B 47 -2.978 -0.454 -17.574 1.00 55.98 O
ATOM 9 C3' C B 47 -2.880 -0.073 -19.937 1.00 53.55 C
ATOM 10 O3' C B 47 -1.551 0.018 -20.452 1.00 42.75 O
ATOM 11 C2' C B 47 -3.240 -1.526 -19.635 1.00 60.08 C
ATOM 12 O2' C B 47 -2.671 -2.477 -20.516 1.00 63.76 O
ATOM 13 C1' C B 47 -2.724 -1.686 -18.210 1.00 58.97 C
ATOM 14 N1 C B 47 -3.396 -2.760 -17.470 1.00 56.08 N
ATOM 15 C2 C B 47 -2.614 -3.833 -17.090 1.00 55.88 C
ATOM 16 O2 C B 47 -1.411 -3.766 -17.317 1.00 49.76 O
ATOM 17 N3 C B 47 -3.166 -4.882 -16.458 1.00 67.98 N
ATOM 18 C4 C B 47 -4.474 -4.881 -16.232 1.00 71.70 C
ATOM 19 N4 C B 47 -4.989 -5.938 -15.602 1.00 79.19 N
ATOM 20 C5 C B 47 -5.314 -3.801 -16.636 1.00 65.19 C
ATOM 21 C6 C B 47 -4.741 -2.768 -17.261 1.00 59.05 C
ATOM 22 P U B 48 -1.352 0.183 -22.050 1.00102.36 P
ATOM 23 OP1 U B 48 -1.839 1.532 -22.408 1.00103.74 O
ATOM 24 OP2 U B 48 -1.979 -1.001 -22.696 1.00 95.78 O
ATOM 25 O5' U B 48 0.217 0.122 -22.236 1.00 64.73 O
TER
ATOM 2 P A A 21 5.113 -11.789 -21.221 1.00 55.12 P
ATOM 3 OP1 A A 21 5.210 -13.265 -21.367 1.00 55.19 O
ATOM 4 OP2 A A 21 5.152 -10.949 -22.438 1.00 40.40 O
ATOM 5 O5' A A 21 3.825 -11.402 -20.348 1.00 61.96 O
ATOM 6 C5' A A 21 3.555 -12.045 -19.107 1.00 50.58 C
ATOM 7 C4' A A 21 2.099 -11.927 -18.691 1.00 42.99 C
ATOM 8 O4' A A 21 1.781 -10.547 -18.362 1.00 38.68 O
ATOM 9 C3' A A 21 1.059 -12.369 -19.720 1.00 39.93 C
ATOM 10 O3' A A 21 0.035 -13.099 -19.061 1.00 38.71 O
ATOM 11 C2' A A 21 0.477 -11.049 -20.209 1.00 39.56 C
ATOM 12 O2' A A 21 -0.846 -11.135 -20.676 1.00 51.44 O
ATOM 13 C1' A A 21 0.556 -10.206 -18.958 1.00 32.26 C
ATOM 14 N9 A A 21 0.549 -8.781 -19.228 1.00 31.40 N
ATOM 15 C8 A A 21 1.611 -8.020 -19.592 1.00 32.75 C
ATOM 16 N7 A A 21 1.311 -6.767 -19.782 1.00 29.99 N
ATOM 17 C5 A A 21 -0.043 -6.715 -19.565 1.00 30.71 C
ATOM 18 C6 A A 21 -0.943 -5.643 -19.636 1.00 36.35 C
ATOM 19 N6 A A 21 -0.551 -4.400 -19.971 1.00 25.43 N
ATOM 20 N1 A A 21 -2.247 -5.907 -19.325 1.00 39.19 N
ATOM 21 C2 A A 21 -2.585 -7.170 -18.994 1.00 36.16 C
ATOM 22 N3 A A 21 -1.816 -8.261 -18.916 1.00 35.35 N
ATOM 23 C4 A A 21 -0.538 -7.956 -19.217 1.00 32.95 C
ATOM 24 P U A 22 -0.002 -14.696 -19.159 1.00 81.16 P
ATOM 25 OP1 U A 22 1.329 -15.135 -19.667 1.00 72.86 O
ATOM 26 OP2 U A 22 -1.221 -15.051 -19.931 1.00 81.51 O
ATOM 27 O5' U A 22 -0.178 -15.146 -17.640 1.00 85.79 O
TER
ATOM 1 O3' C B 46 -6.848 1.878 -17.902 1.00 67.76 O
ATOM 2 P C B 47 -6.655 1.335 -19.400 1.00 61.02 P
ATOM 3 OP1 C B 47 -7.232 2.355 -20.319 1.00 50.27 O
ATOM 4 OP2 C B 47 -7.191 -0.052 -19.443 1.00 66.24 O
ATOM 5 O5' C B 47 -5.073 1.309 -19.546 1.00 53.06 O
ATOM 6 C5' C B 47 -4.225 1.435 -18.405 1.00 47.47 C
ATOM 7 C4' C B 47 -2.986 0.610 -18.572 1.00 52.61 C
ATOM 8 O4' C B 47 -2.978 -0.454 -17.574 1.00 55.98 O
ATOM 9 C3' C B 47 -2.880 -0.073 -19.937 1.00 53.55 C
ATOM 10 O3' C B 47 -1.551 0.018 -20.452 1.00 42.75 O
ATOM 11 C2' C B 47 -3.240 -1.526 -19.635 1.00 60.08 C
ATOM 12 O2' C B 47 -2.671 -2.477 -20.516 1.00 63.76 O
ATOM 13 C1' C B 47 -2.724 -1.686 -18.210 1.00 58.97 C
ATOM 14 N1 C B 47 -3.396 -2.760 -17.470 1.00 56.08 N
ATOM 15 C2 C B 47 -2.614 -3.833 -17.090 1.00 55.88 C
ATOM 16 O2 C B 47 -1.411 -3.766 -17.317 1.00 49.76 O
ATOM 17 N3 C B 47 -3.166 -4.882 -16.458 1.00 67.98 N
ATOM 18 C4 C B 47 -4.474 -4.881 -16.232 1.00 71.70 C
ATOM 19 N4 C B 47 -4.989 -5.938 -15.602 1.00 79.19 N
ATOM 20 C5 C B 47 -5.314 -3.801 -16.636 1.00 65.19 C
ATOM 21 C6 C B 47 -4.741 -2.768 -17.261 1.00 59.05 C
ATOM 22 P U B 48 -1.352 0.183 -22.050 1.00102.36 P
ATOM 23 OP1 U B 48 -1.839 1.532 -22.408 1.00103.74 O
ATOM 24 OP2 U B 48 -1.979 -1.001 -22.696 1.00 95.78 O
ATOM 25 O5' U B 48 0.217 0.122 -22.236 1.00 64.73 O
TER
Atoms:
OP1: (5.210,-13.265,-21.367)
OP2: (5.152,-10.949,-22.438)
C3': (1.059,-12.369,-19.720)
C1': (0.556,-10.206,-18.958)
C5': (3.555,-12.045,-19.107)
O4': (1.781,-10.547,-18.362)
C8: (1.611,-8.020,-19.592)
O2': (-0.846,-11.135,-20.676)
C6: (-0.943,-5.643,-19.636)
C5: (-0.043,-6.715,-19.565)
C4: (-0.538,-7.956,-19.217)
P: (5.113,-11.789,-21.221)
C4': (2.099,-11.927,-18.691)
C2': (0.477,-11.049,-20.209)
C2: (-2.585,-7.170,-18.994)
N1: (-2.247,-5.907,-19.325)
N3: (-1.816,-8.261,-18.916)
N6: (-0.551,-4.400,-19.971)
N7: (1.311,-6.767,-19.782)
N9: (0.549,-8.781,-19.228)
O5': (3.825,-11.402,-20.348)
O3': (0.035,-13.099,-19.061)
OP2: (5.152,-10.949,-22.438)
C3': (1.059,-12.369,-19.720)
C1': (0.556,-10.206,-18.958)
C5': (3.555,-12.045,-19.107)
O4': (1.781,-10.547,-18.362)
C8: (1.611,-8.020,-19.592)
O2': (-0.846,-11.135,-20.676)
C6: (-0.943,-5.643,-19.636)
C5: (-0.043,-6.715,-19.565)
C4: (-0.538,-7.956,-19.217)
P: (5.113,-11.789,-21.221)
C4': (2.099,-11.927,-18.691)
C2': (0.477,-11.049,-20.209)
C2: (-2.585,-7.170,-18.994)
N1: (-2.247,-5.907,-19.325)
N3: (-1.816,-8.261,-18.916)
N6: (-0.551,-4.400,-19.971)
N7: (1.311,-6.767,-19.782)
N9: (0.549,-8.781,-19.228)
O5': (3.825,-11.402,-20.348)
O3': (0.035,-13.099,-19.061)
C2: (-2.614,-3.833,-17.090)
OP1: (-7.232,2.355,-20.319)
OP2: (-7.191,-0.052,-19.443)
C4: (-4.474,-4.881,-16.232)
O5': (-5.073,1.309,-19.546)
C3': (-2.880,-0.073,-19.937)
C1': (-2.724,-1.686,-18.210)
O4': (-2.978,-0.454,-17.574)
C5': (-4.225,1.435,-18.405)
P: (-6.655,1.335,-19.400)
O2: (-1.411,-3.766,-17.317)
C4': (-2.986,0.610,-18.572)
C2': (-3.240,-1.526,-19.635)
O2': (-2.671,-2.477,-20.516)
N1: (-3.396,-2.760,-17.470)
N3: (-3.166,-4.882,-16.458)
N4: (-4.989,-5.938,-15.602)
C6: (-4.741,-2.768,-17.261)
C5: (-5.314,-3.801,-16.636)
O3': (-1.551,0.018,-20.452)
OP1: (-7.232,2.355,-20.319)
OP2: (-7.191,-0.052,-19.443)
C4: (-4.474,-4.881,-16.232)
O5': (-5.073,1.309,-19.546)
C3': (-2.880,-0.073,-19.937)
C1': (-2.724,-1.686,-18.210)
O4': (-2.978,-0.454,-17.574)
C5': (-4.225,1.435,-18.405)
P: (-6.655,1.335,-19.400)
O2: (-1.411,-3.766,-17.317)
C4': (-2.986,0.610,-18.572)
C2': (-3.240,-1.526,-19.635)
O2': (-2.671,-2.477,-20.516)
N1: (-3.396,-2.760,-17.470)
N3: (-3.166,-4.882,-16.458)
N4: (-4.989,-5.938,-15.602)
C6: (-4.741,-2.768,-17.261)
C5: (-5.314,-3.801,-16.636)
O3': (-1.551,0.018,-20.452)
Image (generated by PyMOL):