Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:A33:A35
Extra
PDB:
ATOM 1 O3' A A 32 17.513 14.926 -50.883 1.00 46.48 O
ATOM 2 P G A 33 18.514 14.362 -52.013 1.00 50.27 P
ATOM 3 OP1 G A 33 19.902 14.586 -51.541 1.00 52.09 O
ATOM 4 OP2 G A 33 18.104 14.774 -53.373 1.00 49.34 O
ATOM 5 O5' G A 33 18.251 12.810 -51.864 1.00 50.54 O
ATOM 6 C5' G A 33 18.998 11.930 -52.655 1.00 53.52 C
ATOM 7 C4' G A 33 18.238 10.633 -52.790 1.00 52.77 C
ATOM 8 O4' G A 33 17.267 10.513 -51.722 1.00 49.17 O
ATOM 9 C3' G A 33 17.422 10.496 -54.058 1.00 53.10 C
ATOM 10 O3' G A 33 18.335 10.301 -55.156 1.00 59.17 O
ATOM 11 C2' G A 33 16.613 9.288 -53.610 1.00 50.62 C
ATOM 12 O2' G A 33 17.361 8.098 -53.611 1.00 53.27 O
ATOM 13 C1' G A 33 16.303 9.585 -52.148 1.00 46.58 C
ATOM 14 N9 G A 33 14.966 10.085 -51.844 1.00 43.62 N
ATOM 15 C8 G A 33 14.413 10.119 -50.596 1.00 41.76 C
ATOM 16 N7 G A 33 13.204 10.580 -50.574 1.00 39.92 N
ATOM 17 C5 G A 33 12.932 10.870 -51.892 1.00 40.58 C
ATOM 18 C6 G A 33 11.760 11.408 -52.472 1.00 40.80 C
ATOM 19 O6 G A 33 10.711 11.743 -51.894 1.00 39.72 O
ATOM 20 N1 G A 33 11.888 11.552 -53.848 1.00 41.24 N
ATOM 21 C2 G A 33 13.020 11.214 -54.540 1.00 42.67 C
ATOM 22 N2 G A 33 12.995 11.400 -55.854 1.00 44.34 N
ATOM 23 N3 G A 33 14.117 10.714 -54.011 1.00 43.01 N
ATOM 24 C4 G A 33 14.006 10.571 -52.684 1.00 42.00 C
ATOM 25 P U A 34 17.930 9.954 -56.684 1.00 64.16 P
ATOM 26 OP1 U A 34 19.034 9.173 -57.290 1.00 65.26 O
ATOM 27 OP2 U A 34 17.495 11.238 -57.284 1.00 64.34 O
ATOM 28 O5' U A 34 16.661 8.981 -56.591 1.00 63.15 O
TER
ATOM 1 O3' U B 34 14.550 5.126 -55.789 1.00 60.39 O
ATOM 2 P C B 35 15.351 5.122 -54.388 1.00 58.81 P
ATOM 3 OP1 C B 35 16.156 6.346 -54.240 1.00 57.95 O
ATOM 4 OP2 C B 35 16.047 3.833 -54.230 1.00 60.23 O
ATOM 5 O5' C B 35 14.141 5.175 -53.341 1.00 52.11 O
ATOM 6 C5' C B 35 14.413 5.209 -51.972 1.00 47.46 C
ATOM 7 C4' C B 35 13.227 5.725 -51.192 1.00 43.35 C
ATOM 8 O4' C B 35 13.076 7.159 -51.361 1.00 42.45 O
ATOM 9 C3' C B 35 11.867 5.203 -51.598 1.00 40.81 C
ATOM 10 O3' C B 35 11.708 3.867 -51.144 1.00 39.47 O
ATOM 11 C2' C B 35 10.965 6.244 -50.915 1.00 38.70 C
ATOM 12 O2' C B 35 10.838 6.159 -49.507 1.00 36.31 O
ATOM 13 C1' C B 35 11.705 7.524 -51.293 1.00 38.42 C
ATOM 14 N1 C B 35 11.291 8.028 -52.605 1.00 37.59 N
ATOM 15 C2 C B 35 9.985 8.491 -52.793 1.00 36.73 C
ATOM 16 O2 C B 35 9.172 8.499 -51.861 1.00 34.53 O
ATOM 17 N3 C B 35 9.646 8.934 -54.030 1.00 38.15 N
ATOM 18 C4 C B 35 10.525 8.923 -55.042 1.00 38.94 C
ATOM 19 N4 C B 35 10.123 9.358 -56.236 1.00 39.21 N
ATOM 20 C5 C B 35 11.853 8.453 -54.865 1.00 39.32 C
ATOM 21 C6 C B 35 12.185 8.021 -53.644 1.00 39.02 C
ATOM 22 P C B 36 10.890 2.763 -51.979 1.00 38.78 P
ATOM 23 OP1 C B 36 11.074 1.517 -51.206 1.00 39.57 O
ATOM 24 OP2 C B 36 11.171 2.842 -53.432 1.00 37.74 O
ATOM 25 O5' C B 36 9.388 3.206 -51.759 1.00 36.03 O
TER
ATOM 2 P G A 33 18.514 14.362 -52.013 1.00 50.27 P
ATOM 3 OP1 G A 33 19.902 14.586 -51.541 1.00 52.09 O
ATOM 4 OP2 G A 33 18.104 14.774 -53.373 1.00 49.34 O
ATOM 5 O5' G A 33 18.251 12.810 -51.864 1.00 50.54 O
ATOM 6 C5' G A 33 18.998 11.930 -52.655 1.00 53.52 C
ATOM 7 C4' G A 33 18.238 10.633 -52.790 1.00 52.77 C
ATOM 8 O4' G A 33 17.267 10.513 -51.722 1.00 49.17 O
ATOM 9 C3' G A 33 17.422 10.496 -54.058 1.00 53.10 C
ATOM 10 O3' G A 33 18.335 10.301 -55.156 1.00 59.17 O
ATOM 11 C2' G A 33 16.613 9.288 -53.610 1.00 50.62 C
ATOM 12 O2' G A 33 17.361 8.098 -53.611 1.00 53.27 O
ATOM 13 C1' G A 33 16.303 9.585 -52.148 1.00 46.58 C
ATOM 14 N9 G A 33 14.966 10.085 -51.844 1.00 43.62 N
ATOM 15 C8 G A 33 14.413 10.119 -50.596 1.00 41.76 C
ATOM 16 N7 G A 33 13.204 10.580 -50.574 1.00 39.92 N
ATOM 17 C5 G A 33 12.932 10.870 -51.892 1.00 40.58 C
ATOM 18 C6 G A 33 11.760 11.408 -52.472 1.00 40.80 C
ATOM 19 O6 G A 33 10.711 11.743 -51.894 1.00 39.72 O
ATOM 20 N1 G A 33 11.888 11.552 -53.848 1.00 41.24 N
ATOM 21 C2 G A 33 13.020 11.214 -54.540 1.00 42.67 C
ATOM 22 N2 G A 33 12.995 11.400 -55.854 1.00 44.34 N
ATOM 23 N3 G A 33 14.117 10.714 -54.011 1.00 43.01 N
ATOM 24 C4 G A 33 14.006 10.571 -52.684 1.00 42.00 C
ATOM 25 P U A 34 17.930 9.954 -56.684 1.00 64.16 P
ATOM 26 OP1 U A 34 19.034 9.173 -57.290 1.00 65.26 O
ATOM 27 OP2 U A 34 17.495 11.238 -57.284 1.00 64.34 O
ATOM 28 O5' U A 34 16.661 8.981 -56.591 1.00 63.15 O
TER
ATOM 1 O3' U B 34 14.550 5.126 -55.789 1.00 60.39 O
ATOM 2 P C B 35 15.351 5.122 -54.388 1.00 58.81 P
ATOM 3 OP1 C B 35 16.156 6.346 -54.240 1.00 57.95 O
ATOM 4 OP2 C B 35 16.047 3.833 -54.230 1.00 60.23 O
ATOM 5 O5' C B 35 14.141 5.175 -53.341 1.00 52.11 O
ATOM 6 C5' C B 35 14.413 5.209 -51.972 1.00 47.46 C
ATOM 7 C4' C B 35 13.227 5.725 -51.192 1.00 43.35 C
ATOM 8 O4' C B 35 13.076 7.159 -51.361 1.00 42.45 O
ATOM 9 C3' C B 35 11.867 5.203 -51.598 1.00 40.81 C
ATOM 10 O3' C B 35 11.708 3.867 -51.144 1.00 39.47 O
ATOM 11 C2' C B 35 10.965 6.244 -50.915 1.00 38.70 C
ATOM 12 O2' C B 35 10.838 6.159 -49.507 1.00 36.31 O
ATOM 13 C1' C B 35 11.705 7.524 -51.293 1.00 38.42 C
ATOM 14 N1 C B 35 11.291 8.028 -52.605 1.00 37.59 N
ATOM 15 C2 C B 35 9.985 8.491 -52.793 1.00 36.73 C
ATOM 16 O2 C B 35 9.172 8.499 -51.861 1.00 34.53 O
ATOM 17 N3 C B 35 9.646 8.934 -54.030 1.00 38.15 N
ATOM 18 C4 C B 35 10.525 8.923 -55.042 1.00 38.94 C
ATOM 19 N4 C B 35 10.123 9.358 -56.236 1.00 39.21 N
ATOM 20 C5 C B 35 11.853 8.453 -54.865 1.00 39.32 C
ATOM 21 C6 C B 35 12.185 8.021 -53.644 1.00 39.02 C
ATOM 22 P C B 36 10.890 2.763 -51.979 1.00 38.78 P
ATOM 23 OP1 C B 36 11.074 1.517 -51.206 1.00 39.57 O
ATOM 24 OP2 C B 36 11.171 2.842 -53.432 1.00 37.74 O
ATOM 25 O5' C B 36 9.388 3.206 -51.759 1.00 36.03 O
TER
Atoms:
OP1: (19.902,14.586,-51.541)
OP2: (18.104,14.774,-53.373)
C3': (17.422,10.496,-54.058)
C1': (16.303,9.585,-52.148)
C5': (18.998,11.930,-52.655)
O6: (10.711,11.743,-51.894)
O4': (17.267,10.513,-51.722)
C8: (14.413,10.119,-50.596)
C2: (13.020,11.214,-54.540)
C6: (11.760,11.408,-52.472)
C5: (12.932,10.870,-51.892)
C4: (14.006,10.571,-52.684)
P: (18.514,14.362,-52.013)
C4': (18.238,10.633,-52.790)
C2': (16.613,9.288,-53.610)
O2': (17.361,8.098,-53.611)
N1: (11.888,11.552,-53.848)
N2: (12.995,11.400,-55.854)
N3: (14.117,10.714,-54.011)
N7: (13.204,10.580,-50.574)
N9: (14.966,10.085,-51.844)
O5': (18.251,12.810,-51.864)
O3': (18.335,10.301,-55.156)
OP2: (18.104,14.774,-53.373)
C3': (17.422,10.496,-54.058)
C1': (16.303,9.585,-52.148)
C5': (18.998,11.930,-52.655)
O6: (10.711,11.743,-51.894)
O4': (17.267,10.513,-51.722)
C8: (14.413,10.119,-50.596)
C2: (13.020,11.214,-54.540)
C6: (11.760,11.408,-52.472)
C5: (12.932,10.870,-51.892)
C4: (14.006,10.571,-52.684)
P: (18.514,14.362,-52.013)
C4': (18.238,10.633,-52.790)
C2': (16.613,9.288,-53.610)
O2': (17.361,8.098,-53.611)
N1: (11.888,11.552,-53.848)
N2: (12.995,11.400,-55.854)
N3: (14.117,10.714,-54.011)
N7: (13.204,10.580,-50.574)
N9: (14.966,10.085,-51.844)
O5': (18.251,12.810,-51.864)
O3': (18.335,10.301,-55.156)
C2: (9.985,8.491,-52.793)
OP1: (16.156,6.346,-54.240)
OP2: (16.047,3.833,-54.230)
C4: (10.525,8.923,-55.042)
O5': (14.141,5.175,-53.341)
C3': (11.867,5.203,-51.598)
C1': (11.705,7.524,-51.293)
O4': (13.076,7.159,-51.361)
C5': (14.413,5.209,-51.972)
P: (15.351,5.122,-54.388)
O2: (9.172,8.499,-51.861)
C4': (13.227,5.725,-51.192)
C2': (10.965,6.244,-50.915)
O2': (10.838,6.159,-49.507)
N1: (11.291,8.028,-52.605)
N3: (9.646,8.934,-54.030)
N4: (10.123,9.358,-56.236)
C6: (12.185,8.021,-53.644)
C5: (11.853,8.453,-54.865)
O3': (11.708,3.867,-51.144)
OP1: (16.156,6.346,-54.240)
OP2: (16.047,3.833,-54.230)
C4: (10.525,8.923,-55.042)
O5': (14.141,5.175,-53.341)
C3': (11.867,5.203,-51.598)
C1': (11.705,7.524,-51.293)
O4': (13.076,7.159,-51.361)
C5': (14.413,5.209,-51.972)
P: (15.351,5.122,-54.388)
O2: (9.172,8.499,-51.861)
C4': (13.227,5.725,-51.192)
C2': (10.965,6.244,-50.915)
O2': (10.838,6.159,-49.507)
N1: (11.291,8.028,-52.605)
N3: (9.646,8.934,-54.030)
N4: (10.123,9.358,-56.236)
C6: (12.185,8.021,-53.644)
C5: (11.853,8.453,-54.865)
O3': (11.708,3.867,-51.144)
Image (generated by PyMOL):