ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1893:A1841

Extra

PDB:
ATOM 1 O3' U A1892 -80.662 -2.711 25.029 1.00 42.93 O
ATOM 2 P G A1893 -81.072 -2.820 23.467 1.00 48.48 P
ATOM 3 OP1 G A1893 -79.981 -2.228 22.656 1.00 61.75 O
ATOM 4 OP2 G A1893 -82.454 -2.309 23.284 1.00 55.32 O
ATOM 5 O5' G A1893 -81.103 -4.393 23.207 1.00 51.48 O
ATOM 6 C5' G A1893 -79.902 -5.134 23.144 1.00 51.86 C
ATOM 7 C4' G A1893 -80.006 -6.201 22.074 1.00 44.57 C
ATOM 8 O4' G A1893 -81.209 -6.992 22.290 1.00 54.48 O
ATOM 9 C3' G A1893 -80.026 -5.683 20.645 1.00 40.68 C
ATOM 10 O3' G A1893 -78.801 -6.061 20.032 1.00 41.40 O
ATOM 11 C2' G A1893 -81.190 -6.415 19.991 1.00 45.66 C
ATOM 12 O2' G A1893 -80.742 -7.403 19.101 1.00 76.88 O
ATOM 13 C1' G A1893 -81.977 -7.080 21.117 1.00 53.72 C
ATOM 14 N9 G A1893 -83.202 -6.338 21.344 1.00 70.47 N
ATOM 15 C8 G A1893 -83.353 -4.972 21.243 1.00 79.03 C
ATOM 16 N7 G A1893 -84.556 -4.546 21.496 1.00 58.32 N
ATOM 17 C5 G A1893 -85.241 -5.710 21.779 1.00 56.19 C
ATOM 18 C6 G A1893 -86.592 -5.861 22.125 1.00 68.44 C
ATOM 19 O6 G A1893 -87.450 -4.978 22.242 1.00 77.64 O
ATOM 20 N1 G A1893 -86.908 -7.193 22.339 1.00 71.07 N
ATOM 21 C2 G A1893 -86.010 -8.228 22.224 1.00 73.76 C
ATOM 22 N2 G A1893 -86.542 -9.429 22.462 1.00 86.38 N
ATOM 23 N3 G A1893 -84.720 -8.116 21.901 1.00 55.88 N
ATOM 24 C4 G A1893 -84.426 -6.821 21.693 1.00 58.56 C
ATOM 25 P A A1894 -78.290 -5.519 18.595 1.00 41.78 P
ATOM 26 OP1 A A1894 -77.743 -4.150 18.778 1.00 59.60 O
ATOM 27 OP2 A A1894 -79.294 -5.783 17.536 1.00 29.17 O
ATOM 28 O5' A A1894 -77.058 -6.497 18.320 1.00 37.95 O
TER

ATOM 1 O3' C B1840 -92.053 -2.224 21.259 1.00 57.57 O
ATOM 2 P C B1841 -91.475 -1.247 22.371 1.00 65.52 P
ATOM 3 OP1 C B1841 -92.588 -0.519 23.035 1.00 62.62 O
ATOM 4 OP2 C B1841 -90.367 -0.503 21.718 1.00 51.19 O
ATOM 5 O5' C B1841 -90.886 -2.293 23.422 1.00 60.23 O
ATOM 6 C5' C B1841 -91.792 -3.205 24.021 1.00 55.20 C
ATOM 7 C4' C B1841 -91.155 -3.948 25.179 1.00 52.86 C
ATOM 8 O4' C B1841 -89.859 -4.494 24.789 1.00 52.26 O
ATOM 9 C3' C B1841 -90.898 -3.106 26.425 1.00 50.75 C
ATOM 10 O3' C B1841 -91.423 -3.791 27.550 1.00 48.78 O
ATOM 11 C2' C B1841 -89.369 -3.039 26.477 1.00 50.35 C
ATOM 12 O2' C B1841 -88.878 -2.878 27.790 1.00 42.78 O
ATOM 13 C1' C B1841 -89.034 -4.423 25.935 1.00 56.54 C
ATOM 14 N1 C B1841 -87.597 -4.665 25.583 1.00 52.34 N
ATOM 15 C2 C B1841 -87.028 -5.937 25.786 1.00 50.04 C
ATOM 16 O2 C B1841 -87.723 -6.854 26.259 1.00 47.54 O
ATOM 17 N3 C B1841 -85.722 -6.114 25.454 1.00 47.37 N
ATOM 18 C4 C B1841 -85.008 -5.095 24.955 1.00 49.57 C
ATOM 19 N4 C B1841 -83.730 -5.302 24.648 1.00 49.09 N
ATOM 20 C5 C B1841 -85.565 -3.805 24.743 1.00 54.08 C
ATOM 21 C6 C B1841 -86.851 -3.639 25.071 1.00 56.35 C
ATOM 22 P G B1842 -92.546 -3.117 28.445 1.00 50.86 P
ATOM 23 OP1 G B1842 -93.136 -2.069 27.580 1.00 74.09 O
ATOM 24 OP2 G B1842 -92.025 -2.769 29.787 1.00 61.53 O
ATOM 25 O5' G B1842 -93.610 -4.279 28.698 1.00 61.92 O
TER

Atoms:
OP1: (-79.981,-2.228,22.656)
OP2: (-82.454,-2.309,23.284)
C3': (-80.026,-5.683,20.645)
C1': (-81.977,-7.080,21.117)
C5': (-79.902,-5.134,23.144)
O6: (-87.450,-4.978,22.242)
O4': (-81.209,-6.992,22.290)
C8: (-83.353,-4.972,21.243)
C2: (-86.010,-8.228,22.224)
C6: (-86.592,-5.861,22.125)
C5: (-85.241,-5.710,21.779)
C4: (-84.426,-6.821,21.693)
P: (-81.072,-2.820,23.467)
C4': (-80.006,-6.201,22.074)
C2': (-81.190,-6.415,19.991)
O2': (-80.742,-7.403,19.101)
N1: (-86.908,-7.193,22.339)
N2: (-86.542,-9.429,22.462)
N3: (-84.720,-8.116,21.901)
N7: (-84.556,-4.546,21.496)
N9: (-83.202,-6.338,21.344)
O5': (-81.103,-4.393,23.207)
O3': (-78.801,-6.061,20.032)
C2: (-87.028,-5.937,25.786)
OP1: (-92.588,-0.519,23.035)
OP2: (-90.367,-0.503,21.718)
C4: (-85.008,-5.095,24.955)
O5': (-90.886,-2.293,23.422)
C3': (-90.898,-3.106,26.425)
C1': (-89.034,-4.423,25.935)
O4': (-89.859,-4.494,24.789)
C5': (-91.792,-3.205,24.021)
P: (-91.475,-1.247,22.371)
O2: (-87.723,-6.854,26.259)
C4': (-91.155,-3.948,25.179)
C2': (-89.369,-3.039,26.477)
O2': (-88.878,-2.878,27.790)
N1: (-87.597,-4.665,25.583)
N3: (-85.722,-6.114,25.454)
N4: (-83.730,-5.302,24.648)
C6: (-86.851,-3.639,25.071)
C5: (-85.565,-3.805,24.743)
O3': (-91.423,-3.791,27.550)
Image (generated by PyMOL):
PyMOL image
show in jmol