Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01018:01086
Extra
PDB:
ATOM 1 O3' A A1017 54.640 97.836 109.970 1.00 46.64 O
ATOM 2 P G A1018 53.384 96.926 110.413 1.00 47.54 P
ATOM 3 OP1 G A1018 52.963 97.413 111.760 1.00 45.86 O
ATOM 4 OP2 G A1018 53.680 95.477 110.197 1.00 45.18 O
ATOM 5 O5' G A1018 52.247 97.309 109.371 1.00 49.08 O
ATOM 6 C5' G A1018 51.725 98.637 109.307 1.00 46.14 C
ATOM 7 C4' G A1018 51.751 99.120 107.886 1.00 45.59 C
ATOM 8 O4' G A1018 51.141 100.435 107.831 1.00 44.84 O
ATOM 9 C3' G A1018 53.157 99.281 107.313 1.00 46.87 C
ATOM 10 O3' G A1018 53.128 99.093 105.887 1.00 47.22 O
ATOM 11 C2' G A1018 53.459 100.734 107.648 1.00 45.22 C
ATOM 12 O2' G A1018 54.460 101.230 106.796 1.00 50.27 O
ATOM 13 C1' G A1018 52.093 101.376 107.387 1.00 43.11 C
ATOM 14 N9 G A1018 51.788 102.655 108.024 1.00 40.29 N
ATOM 15 C8 G A1018 52.445 103.264 109.064 1.00 40.36 C
ATOM 16 N7 G A1018 51.923 104.417 109.395 1.00 39.44 N
ATOM 17 C5 G A1018 50.862 104.580 108.519 1.00 36.15 C
ATOM 18 C6 G A1018 49.949 105.646 108.382 1.00 36.15 C
ATOM 19 O6 G A1018 49.896 106.697 109.021 1.00 36.54 O
ATOM 20 N1 G A1018 49.031 105.408 107.368 1.00 38.05 N
ATOM 21 C2 G A1018 48.998 104.287 106.579 1.00 39.77 C
ATOM 22 N2 G A1018 48.026 104.242 105.652 1.00 39.83 N
ATOM 23 N3 G A1018 49.853 103.287 106.691 1.00 38.63 N
ATOM 24 C4 G A1018 50.755 103.501 107.673 1.00 38.46 C
ATOM 25 P C A1019 54.084 97.996 105.188 1.00 46.34 P
ATOM 26 OP1 C A1019 53.732 97.944 103.744 1.00 48.84 O
ATOM 27 OP2 C A1019 54.069 96.746 105.982 1.00 48.03 O
ATOM 28 O5' C A1019 55.534 98.648 105.250 1.00 47.15 O
TER
ATOM 1 O3' C B1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 2 P C B1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 3 OP1 C B1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 4 OP2 C B1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 5 O5' C B1086 47.962 99.261 112.149 1.00 52.48 O
ATOM 6 C5' C B1086 49.350 98.987 112.400 1.00 49.81 C
ATOM 7 C4' C B1086 50.069 100.268 112.737 1.00 50.11 C
ATOM 8 O4' C B1086 50.220 101.065 111.537 1.00 49.32 O
ATOM 9 C3' C B1086 49.330 101.166 113.718 1.00 50.87 C
ATOM 10 O3' C B1086 49.629 100.793 115.066 1.00 50.91 O
ATOM 11 C2' C B1086 49.871 102.550 113.374 1.00 50.85 C
ATOM 12 O2' C B1086 51.114 102.834 113.981 1.00 54.82 O
ATOM 13 C1' C B1086 50.078 102.439 111.858 1.00 49.61 C
ATOM 14 N1 C B1086 48.996 103.013 111.033 1.00 48.71 N
ATOM 15 C2 C B1086 48.636 104.358 111.218 1.00 48.55 C
ATOM 16 O2 C B1086 49.250 105.041 112.056 1.00 50.80 O
ATOM 17 N3 C B1086 47.639 104.882 110.469 1.00 46.81 N
ATOM 18 C4 C B1086 47.028 104.133 109.555 1.00 45.19 C
ATOM 19 N4 C B1086 46.065 104.700 108.828 1.00 45.65 N
ATOM 20 C5 C B1086 47.377 102.769 109.341 1.00 46.34 C
ATOM 21 C6 C B1086 48.350 102.252 110.097 1.00 46.81 C
ATOM 22 P U B1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 23 OP1 U B1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 24 OP2 U B1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 25 O5' U B1087 47.441 101.640 116.012 1.00 50.82 O
TER
ATOM 2 P G A1018 53.384 96.926 110.413 1.00 47.54 P
ATOM 3 OP1 G A1018 52.963 97.413 111.760 1.00 45.86 O
ATOM 4 OP2 G A1018 53.680 95.477 110.197 1.00 45.18 O
ATOM 5 O5' G A1018 52.247 97.309 109.371 1.00 49.08 O
ATOM 6 C5' G A1018 51.725 98.637 109.307 1.00 46.14 C
ATOM 7 C4' G A1018 51.751 99.120 107.886 1.00 45.59 C
ATOM 8 O4' G A1018 51.141 100.435 107.831 1.00 44.84 O
ATOM 9 C3' G A1018 53.157 99.281 107.313 1.00 46.87 C
ATOM 10 O3' G A1018 53.128 99.093 105.887 1.00 47.22 O
ATOM 11 C2' G A1018 53.459 100.734 107.648 1.00 45.22 C
ATOM 12 O2' G A1018 54.460 101.230 106.796 1.00 50.27 O
ATOM 13 C1' G A1018 52.093 101.376 107.387 1.00 43.11 C
ATOM 14 N9 G A1018 51.788 102.655 108.024 1.00 40.29 N
ATOM 15 C8 G A1018 52.445 103.264 109.064 1.00 40.36 C
ATOM 16 N7 G A1018 51.923 104.417 109.395 1.00 39.44 N
ATOM 17 C5 G A1018 50.862 104.580 108.519 1.00 36.15 C
ATOM 18 C6 G A1018 49.949 105.646 108.382 1.00 36.15 C
ATOM 19 O6 G A1018 49.896 106.697 109.021 1.00 36.54 O
ATOM 20 N1 G A1018 49.031 105.408 107.368 1.00 38.05 N
ATOM 21 C2 G A1018 48.998 104.287 106.579 1.00 39.77 C
ATOM 22 N2 G A1018 48.026 104.242 105.652 1.00 39.83 N
ATOM 23 N3 G A1018 49.853 103.287 106.691 1.00 38.63 N
ATOM 24 C4 G A1018 50.755 103.501 107.673 1.00 38.46 C
ATOM 25 P C A1019 54.084 97.996 105.188 1.00 46.34 P
ATOM 26 OP1 C A1019 53.732 97.944 103.744 1.00 48.84 O
ATOM 27 OP2 C A1019 54.069 96.746 105.982 1.00 48.03 O
ATOM 28 O5' C A1019 55.534 98.648 105.250 1.00 47.15 O
TER
ATOM 1 O3' C B1085 45.660 98.362 111.667 1.00 53.10 O
ATOM 2 P C B1086 47.141 98.456 111.047 1.00 54.76 P
ATOM 3 OP1 C B1086 47.055 99.305 109.831 1.00 57.27 O
ATOM 4 OP2 C B1086 47.698 97.079 110.945 1.00 53.57 O
ATOM 5 O5' C B1086 47.962 99.261 112.149 1.00 52.48 O
ATOM 6 C5' C B1086 49.350 98.987 112.400 1.00 49.81 C
ATOM 7 C4' C B1086 50.069 100.268 112.737 1.00 50.11 C
ATOM 8 O4' C B1086 50.220 101.065 111.537 1.00 49.32 O
ATOM 9 C3' C B1086 49.330 101.166 113.718 1.00 50.87 C
ATOM 10 O3' C B1086 49.629 100.793 115.066 1.00 50.91 O
ATOM 11 C2' C B1086 49.871 102.550 113.374 1.00 50.85 C
ATOM 12 O2' C B1086 51.114 102.834 113.981 1.00 54.82 O
ATOM 13 C1' C B1086 50.078 102.439 111.858 1.00 49.61 C
ATOM 14 N1 C B1086 48.996 103.013 111.033 1.00 48.71 N
ATOM 15 C2 C B1086 48.636 104.358 111.218 1.00 48.55 C
ATOM 16 O2 C B1086 49.250 105.041 112.056 1.00 50.80 O
ATOM 17 N3 C B1086 47.639 104.882 110.469 1.00 46.81 N
ATOM 18 C4 C B1086 47.028 104.133 109.555 1.00 45.19 C
ATOM 19 N4 C B1086 46.065 104.700 108.828 1.00 45.65 N
ATOM 20 C5 C B1086 47.377 102.769 109.341 1.00 46.34 C
ATOM 21 C6 C B1086 48.350 102.252 110.097 1.00 46.81 C
ATOM 22 P U B1087 48.446 100.410 116.089 1.00 50.85 P
ATOM 23 OP1 U B1087 49.050 100.384 117.443 1.00 51.43 O
ATOM 24 OP2 U B1087 47.729 99.210 115.587 1.00 47.73 O
ATOM 25 O5' U B1087 47.441 101.640 116.012 1.00 50.82 O
TER
Atoms:
OP1: (52.963,97.413,111.760)
OP2: (53.680,95.477,110.197)
C3': (53.157,99.281,107.313)
C1': (52.093,101.376,107.387)
C5': (51.725,98.637,109.307)
O6: (49.896,106.697,109.021)
O4': (51.141,100.435,107.831)
C8: (52.445,103.264,109.064)
C2: (48.998,104.287,106.579)
C6: (49.949,105.646,108.382)
C5: (50.862,104.580,108.519)
C4: (50.755,103.501,107.673)
P: (53.384,96.926,110.413)
C4': (51.751,99.120,107.886)
C2': (53.459,100.734,107.648)
O2': (54.460,101.230,106.796)
N1: (49.031,105.408,107.368)
N2: (48.026,104.242,105.652)
N3: (49.853,103.287,106.691)
N7: (51.923,104.417,109.395)
N9: (51.788,102.655,108.024)
O5': (52.247,97.309,109.371)
O3': (53.128,99.093,105.887)
OP2: (53.680,95.477,110.197)
C3': (53.157,99.281,107.313)
C1': (52.093,101.376,107.387)
C5': (51.725,98.637,109.307)
O6: (49.896,106.697,109.021)
O4': (51.141,100.435,107.831)
C8: (52.445,103.264,109.064)
C2: (48.998,104.287,106.579)
C6: (49.949,105.646,108.382)
C5: (50.862,104.580,108.519)
C4: (50.755,103.501,107.673)
P: (53.384,96.926,110.413)
C4': (51.751,99.120,107.886)
C2': (53.459,100.734,107.648)
O2': (54.460,101.230,106.796)
N1: (49.031,105.408,107.368)
N2: (48.026,104.242,105.652)
N3: (49.853,103.287,106.691)
N7: (51.923,104.417,109.395)
N9: (51.788,102.655,108.024)
O5': (52.247,97.309,109.371)
O3': (53.128,99.093,105.887)
C2: (48.636,104.358,111.218)
OP1: (47.055,99.305,109.831)
OP2: (47.698,97.079,110.945)
C4: (47.028,104.133,109.555)
O5': (47.962,99.261,112.149)
C3': (49.330,101.166,113.718)
C1': (50.078,102.439,111.858)
O4': (50.220,101.065,111.537)
C5': (49.350,98.987,112.400)
P: (47.141,98.456,111.047)
O2: (49.250,105.041,112.056)
C4': (50.069,100.268,112.737)
C2': (49.871,102.550,113.374)
O2': (51.114,102.834,113.981)
N1: (48.996,103.013,111.033)
N3: (47.639,104.882,110.469)
N4: (46.065,104.700,108.828)
C6: (48.350,102.252,110.097)
C5: (47.377,102.769,109.341)
O3': (49.629,100.793,115.066)
OP1: (47.055,99.305,109.831)
OP2: (47.698,97.079,110.945)
C4: (47.028,104.133,109.555)
O5': (47.962,99.261,112.149)
C3': (49.330,101.166,113.718)
C1': (50.078,102.439,111.858)
O4': (50.220,101.065,111.537)
C5': (49.350,98.987,112.400)
P: (47.141,98.456,111.047)
O2: (49.250,105.041,112.056)
C4': (50.069,100.268,112.737)
C2': (49.871,102.550,113.374)
O2': (51.114,102.834,113.981)
N1: (48.996,103.013,111.033)
N3: (47.639,104.882,110.469)
N4: (46.065,104.700,108.828)
C6: (48.350,102.252,110.097)
C5: (47.377,102.769,109.341)
O3': (49.629,100.793,115.066)
Image (generated by PyMOL):