ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01018:01086

Extra

PDB:
ATOM 1 O3' A A1017 54.575 98.777 109.978 1.00 39.59 O
ATOM 2 P G A1018 53.300 97.930 110.478 1.00 39.11 P
ATOM 3 OP1 G A1018 52.889 98.465 111.815 1.00 34.79 O
ATOM 4 OP2 G A1018 53.605 96.481 110.320 1.00 36.87 O
ATOM 5 O5' G A1018 52.180 98.306 109.414 1.00 36.95 O
ATOM 6 C5' G A1018 51.722 99.660 109.285 1.00 34.92 C
ATOM 7 C4' G A1018 51.830 100.107 107.849 1.00 33.15 C
ATOM 8 O4' G A1018 51.246 101.431 107.717 1.00 32.16 O
ATOM 9 C3' G A1018 53.249 100.221 107.313 1.00 31.74 C
ATOM 10 O3' G A1018 53.202 99.992 105.908 1.00 31.89 O
ATOM 11 C2' G A1018 53.573 101.684 107.595 1.00 32.30 C
ATOM 12 O2' G A1018 54.592 102.175 106.759 1.00 33.92 O
ATOM 13 C1' G A1018 52.231 102.338 107.267 1.00 32.68 C
ATOM 14 N9 G A1018 51.944 103.649 107.849 1.00 32.53 N
ATOM 15 C8 G A1018 52.644 104.325 108.818 1.00 32.70 C
ATOM 16 N7 G A1018 52.110 105.479 109.127 1.00 31.83 N
ATOM 17 C5 G A1018 50.992 105.571 108.312 1.00 32.58 C
ATOM 18 C6 G A1018 50.014 106.598 108.197 1.00 33.24 C
ATOM 19 O6 G A1018 49.930 107.660 108.823 1.00 34.32 O
ATOM 20 N1 G A1018 49.059 106.286 107.237 1.00 33.79 N
ATOM 21 C2 G A1018 49.035 105.137 106.486 1.00 34.69 C
ATOM 22 N2 G A1018 48.026 105.023 105.612 1.00 37.33 N
ATOM 23 N3 G A1018 49.932 104.173 106.585 1.00 33.71 N
ATOM 24 C4 G A1018 50.876 104.453 107.512 1.00 33.58 C
ATOM 25 P C A1019 54.045 98.791 105.258 1.00 34.46 P
ATOM 26 OP1 C A1019 53.648 98.654 103.836 1.00 35.49 O
ATOM 27 OP2 C A1019 53.935 97.617 106.154 1.00 35.51 O
ATOM 28 O5' C A1019 55.540 99.344 105.242 1.00 34.84 O
TER

ATOM 1 O3' C B1085 45.647 99.117 111.700 1.00 43.50 O
ATOM 2 P C B1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 3 OP1 C B1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 4 OP2 C B1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 5 O5' C B1086 47.999 99.882 112.104 1.00 43.27 O
ATOM 6 C5' C B1086 49.388 99.600 112.291 1.00 40.76 C
ATOM 7 C4' C B1086 50.117 100.867 112.644 1.00 40.58 C
ATOM 8 O4' C B1086 50.246 101.688 111.460 1.00 38.47 O
ATOM 9 C3' C B1086 49.418 101.762 113.657 1.00 40.03 C
ATOM 10 O3' C B1086 49.684 101.362 115.003 1.00 41.29 O
ATOM 11 C2' C B1086 50.016 103.128 113.352 1.00 38.79 C
ATOM 12 O2' C B1086 51.262 103.326 113.985 1.00 37.93 O
ATOM 13 C1' C B1086 50.199 103.055 111.830 1.00 38.19 C
ATOM 14 N1 C B1086 49.143 103.721 111.043 1.00 37.69 N
ATOM 15 C2 C B1086 48.967 105.104 111.176 1.00 36.93 C
ATOM 16 O2 C B1086 49.689 105.732 111.966 1.00 39.13 O
ATOM 17 N3 C B1086 48.019 105.721 110.444 1.00 35.89 N
ATOM 18 C4 C B1086 47.262 105.019 109.607 1.00 35.04 C
ATOM 19 N4 C B1086 46.349 105.678 108.901 1.00 36.85 N
ATOM 20 C5 C B1086 47.410 103.611 109.455 1.00 35.76 C
ATOM 21 C6 C B1086 48.350 103.007 110.186 1.00 36.81 C
ATOM 22 P U B1087 48.466 101.102 116.021 1.00 42.75 P
ATOM 23 OP1 U B1087 49.004 101.102 117.405 1.00 42.83 O
ATOM 24 OP2 U B1087 47.705 99.924 115.527 1.00 42.02 O
ATOM 25 O5' U B1087 47.552 102.388 115.871 1.00 40.88 O
TER

Atoms:
OP1: (52.889,98.465,111.815)
OP2: (53.605,96.481,110.320)
C3': (53.249,100.221,107.313)
C1': (52.231,102.338,107.267)
C5': (51.722,99.660,109.285)
O6: (49.930,107.660,108.823)
O4': (51.246,101.431,107.717)
C8: (52.644,104.325,108.818)
C2: (49.035,105.137,106.486)
C6: (50.014,106.598,108.197)
C5: (50.992,105.571,108.312)
C4: (50.876,104.453,107.512)
P: (53.300,97.930,110.478)
C4': (51.830,100.107,107.849)
C2': (53.573,101.684,107.595)
O2': (54.592,102.175,106.759)
N1: (49.059,106.286,107.237)
N2: (48.026,105.023,105.612)
N3: (49.932,104.173,106.585)
N7: (52.110,105.479,109.127)
N9: (51.944,103.649,107.849)
O5': (52.180,98.306,109.414)
O3': (53.202,99.992,105.908)
C2: (48.967,105.104,111.176)
OP1: (47.117,99.869,109.794)
OP2: (47.585,97.667,111.018)
C4: (47.262,105.019,109.607)
O5': (47.999,99.882,112.104)
C3': (49.418,101.762,113.657)
C1': (50.199,103.055,111.830)
O4': (50.246,101.688,111.460)
C5': (49.388,99.600,112.291)
P: (47.124,99.077,111.051)
O2: (49.689,105.732,111.966)
C4': (50.117,100.867,112.644)
C2': (50.016,103.128,113.352)
O2': (51.262,103.326,113.985)
N1: (49.143,103.721,111.043)
N3: (48.019,105.721,110.444)
N4: (46.349,105.678,108.901)
C6: (48.350,103.007,110.186)
C5: (47.410,103.611,109.455)
O3': (49.684,101.362,115.003)
Image (generated by PyMOL):
PyMOL image
show in jmol