Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0423:0223
Extra
PDB:
ATOM 1 O3' U A 422 66.676 115.982 16.004 1.00 40.22 O
ATOM 2 P A A 423 65.668 115.687 17.214 1.00 39.53 P
ATOM 3 OP1 A A 423 65.874 116.736 18.243 1.00 39.50 O
ATOM 4 OP2 A A 423 65.826 114.259 17.582 1.00 39.13 O
ATOM 5 O5' A A 423 64.220 115.898 16.581 1.00 39.12 O
ATOM 6 C5' A A 423 63.861 117.126 15.905 1.00 38.12 C
ATOM 7 C4' A A 423 62.558 116.941 15.155 1.00 39.45 C
ATOM 8 O4' A A 423 62.720 115.895 14.163 1.00 39.33 O
ATOM 9 C3' A A 423 61.394 116.487 16.021 1.00 40.86 C
ATOM 10 O3' A A 423 60.706 117.616 16.538 1.00 43.72 O
ATOM 11 C2' A A 423 60.525 115.696 15.053 1.00 40.60 C
ATOM 12 O2' A A 423 59.686 116.525 14.278 1.00 40.57 O
ATOM 13 C1' A A 423 61.581 115.053 14.156 1.00 37.99 C
ATOM 14 N9 A A 423 62.019 113.724 14.577 1.00 38.74 N
ATOM 15 C8 A A 423 63.232 113.383 15.131 1.00 38.68 C
ATOM 16 N7 A A 423 63.375 112.100 15.342 1.00 39.83 N
ATOM 17 C5 A A 423 62.170 111.559 14.915 1.00 40.12 C
ATOM 18 C6 A A 423 61.699 110.241 14.861 1.00 40.63 C
ATOM 19 N6 A A 423 62.417 109.183 15.244 1.00 41.19 N
ATOM 20 N1 A A 423 60.450 110.041 14.388 1.00 41.24 N
ATOM 21 C2 A A 423 59.737 111.103 13.991 1.00 41.01 C
ATOM 22 N3 A A 423 60.075 112.389 13.985 1.00 40.07 N
ATOM 23 C4 A A 423 61.319 112.551 14.462 1.00 39.12 C
ATOM 24 P A A 424 59.953 117.510 17.943 1.00 44.26 P
ATOM 25 OP1 A A 424 59.144 118.742 18.108 1.00 46.08 O
ATOM 26 OP2 A A 424 60.960 117.149 18.975 1.00 46.97 O
ATOM 27 O5' A A 424 58.975 116.273 17.742 1.00 45.10 O
TER
ATOM 1 O3' A B 222 53.480 110.521 16.771 1.00 45.07 O
ATOM 2 P C B 223 53.696 110.367 15.188 1.00 47.54 P
ATOM 3 OP1 C B 223 53.668 111.744 14.627 1.00 47.81 O
ATOM 4 OP2 C B 223 52.760 109.337 14.662 1.00 45.60 O
ATOM 5 O5' C B 223 55.185 109.808 15.111 1.00 45.81 O
ATOM 6 C5' C B 223 55.676 109.152 13.952 1.00 44.80 C
ATOM 7 C4' C B 223 57.045 108.590 14.231 1.00 45.52 C
ATOM 8 O4' C B 223 56.975 107.664 15.346 1.00 46.13 O
ATOM 9 C3' C B 223 57.596 107.773 13.085 1.00 46.18 C
ATOM 10 O3' C B 223 58.199 108.633 12.123 1.00 47.83 O
ATOM 11 C2' C B 223 58.546 106.808 13.785 1.00 44.10 C
ATOM 12 O2' C B 223 59.794 107.365 14.126 1.00 42.96 O
ATOM 13 C1' C B 223 57.780 106.525 15.078 1.00 43.87 C
ATOM 14 N1 C B 223 56.901 105.342 14.999 1.00 42.79 N
ATOM 15 C2 C B 223 57.478 104.058 14.963 1.00 43.14 C
ATOM 16 O2 C B 223 58.713 103.943 15.016 1.00 44.90 O
ATOM 17 N3 C B 223 56.671 102.977 14.873 1.00 42.70 N
ATOM 18 C4 C B 223 55.344 103.133 14.828 1.00 42.82 C
ATOM 19 N4 C B 223 54.591 102.038 14.733 1.00 44.35 N
ATOM 20 C5 C B 223 54.732 104.420 14.878 1.00 42.70 C
ATOM 21 C6 C B 223 55.539 105.485 14.958 1.00 43.68 C
ATOM 22 P A B 224 58.317 108.159 10.595 1.00 47.74 P
ATOM 23 OP1 A B 224 58.927 109.258 9.804 1.00 49.30 O
ATOM 24 OP2 A B 224 56.981 107.628 10.210 1.00 45.96 O
ATOM 25 O5' A B 224 59.363 106.965 10.690 1.00 44.02 O
TER
ATOM 2 P A A 423 65.668 115.687 17.214 1.00 39.53 P
ATOM 3 OP1 A A 423 65.874 116.736 18.243 1.00 39.50 O
ATOM 4 OP2 A A 423 65.826 114.259 17.582 1.00 39.13 O
ATOM 5 O5' A A 423 64.220 115.898 16.581 1.00 39.12 O
ATOM 6 C5' A A 423 63.861 117.126 15.905 1.00 38.12 C
ATOM 7 C4' A A 423 62.558 116.941 15.155 1.00 39.45 C
ATOM 8 O4' A A 423 62.720 115.895 14.163 1.00 39.33 O
ATOM 9 C3' A A 423 61.394 116.487 16.021 1.00 40.86 C
ATOM 10 O3' A A 423 60.706 117.616 16.538 1.00 43.72 O
ATOM 11 C2' A A 423 60.525 115.696 15.053 1.00 40.60 C
ATOM 12 O2' A A 423 59.686 116.525 14.278 1.00 40.57 O
ATOM 13 C1' A A 423 61.581 115.053 14.156 1.00 37.99 C
ATOM 14 N9 A A 423 62.019 113.724 14.577 1.00 38.74 N
ATOM 15 C8 A A 423 63.232 113.383 15.131 1.00 38.68 C
ATOM 16 N7 A A 423 63.375 112.100 15.342 1.00 39.83 N
ATOM 17 C5 A A 423 62.170 111.559 14.915 1.00 40.12 C
ATOM 18 C6 A A 423 61.699 110.241 14.861 1.00 40.63 C
ATOM 19 N6 A A 423 62.417 109.183 15.244 1.00 41.19 N
ATOM 20 N1 A A 423 60.450 110.041 14.388 1.00 41.24 N
ATOM 21 C2 A A 423 59.737 111.103 13.991 1.00 41.01 C
ATOM 22 N3 A A 423 60.075 112.389 13.985 1.00 40.07 N
ATOM 23 C4 A A 423 61.319 112.551 14.462 1.00 39.12 C
ATOM 24 P A A 424 59.953 117.510 17.943 1.00 44.26 P
ATOM 25 OP1 A A 424 59.144 118.742 18.108 1.00 46.08 O
ATOM 26 OP2 A A 424 60.960 117.149 18.975 1.00 46.97 O
ATOM 27 O5' A A 424 58.975 116.273 17.742 1.00 45.10 O
TER
ATOM 1 O3' A B 222 53.480 110.521 16.771 1.00 45.07 O
ATOM 2 P C B 223 53.696 110.367 15.188 1.00 47.54 P
ATOM 3 OP1 C B 223 53.668 111.744 14.627 1.00 47.81 O
ATOM 4 OP2 C B 223 52.760 109.337 14.662 1.00 45.60 O
ATOM 5 O5' C B 223 55.185 109.808 15.111 1.00 45.81 O
ATOM 6 C5' C B 223 55.676 109.152 13.952 1.00 44.80 C
ATOM 7 C4' C B 223 57.045 108.590 14.231 1.00 45.52 C
ATOM 8 O4' C B 223 56.975 107.664 15.346 1.00 46.13 O
ATOM 9 C3' C B 223 57.596 107.773 13.085 1.00 46.18 C
ATOM 10 O3' C B 223 58.199 108.633 12.123 1.00 47.83 O
ATOM 11 C2' C B 223 58.546 106.808 13.785 1.00 44.10 C
ATOM 12 O2' C B 223 59.794 107.365 14.126 1.00 42.96 O
ATOM 13 C1' C B 223 57.780 106.525 15.078 1.00 43.87 C
ATOM 14 N1 C B 223 56.901 105.342 14.999 1.00 42.79 N
ATOM 15 C2 C B 223 57.478 104.058 14.963 1.00 43.14 C
ATOM 16 O2 C B 223 58.713 103.943 15.016 1.00 44.90 O
ATOM 17 N3 C B 223 56.671 102.977 14.873 1.00 42.70 N
ATOM 18 C4 C B 223 55.344 103.133 14.828 1.00 42.82 C
ATOM 19 N4 C B 223 54.591 102.038 14.733 1.00 44.35 N
ATOM 20 C5 C B 223 54.732 104.420 14.878 1.00 42.70 C
ATOM 21 C6 C B 223 55.539 105.485 14.958 1.00 43.68 C
ATOM 22 P A B 224 58.317 108.159 10.595 1.00 47.74 P
ATOM 23 OP1 A B 224 58.927 109.258 9.804 1.00 49.30 O
ATOM 24 OP2 A B 224 56.981 107.628 10.210 1.00 45.96 O
ATOM 25 O5' A B 224 59.363 106.965 10.690 1.00 44.02 O
TER
Atoms:
OP1: (65.874,116.736,18.243)
OP2: (65.826,114.259,17.582)
C3': (61.394,116.487,16.021)
C1': (61.581,115.053,14.156)
C5': (63.861,117.126,15.905)
O4': (62.720,115.895,14.163)
C8: (63.232,113.383,15.131)
O2': (59.686,116.525,14.278)
C6: (61.699,110.241,14.861)
C5: (62.170,111.559,14.915)
C4: (61.319,112.551,14.462)
P: (65.668,115.687,17.214)
C4': (62.558,116.941,15.155)
C2': (60.525,115.696,15.053)
C2: (59.737,111.103,13.991)
N1: (60.450,110.041,14.388)
N3: (60.075,112.389,13.985)
N6: (62.417,109.183,15.244)
N7: (63.375,112.100,15.342)
N9: (62.019,113.724,14.577)
O5': (64.220,115.898,16.581)
O3': (60.706,117.616,16.538)
OP2: (65.826,114.259,17.582)
C3': (61.394,116.487,16.021)
C1': (61.581,115.053,14.156)
C5': (63.861,117.126,15.905)
O4': (62.720,115.895,14.163)
C8: (63.232,113.383,15.131)
O2': (59.686,116.525,14.278)
C6: (61.699,110.241,14.861)
C5: (62.170,111.559,14.915)
C4: (61.319,112.551,14.462)
P: (65.668,115.687,17.214)
C4': (62.558,116.941,15.155)
C2': (60.525,115.696,15.053)
C2: (59.737,111.103,13.991)
N1: (60.450,110.041,14.388)
N3: (60.075,112.389,13.985)
N6: (62.417,109.183,15.244)
N7: (63.375,112.100,15.342)
N9: (62.019,113.724,14.577)
O5': (64.220,115.898,16.581)
O3': (60.706,117.616,16.538)
C2: (57.478,104.058,14.963)
OP1: (53.668,111.744,14.627)
OP2: (52.760,109.337,14.662)
C4: (55.344,103.133,14.828)
O5': (55.185,109.808,15.111)
C3': (57.596,107.773,13.085)
C1': (57.780,106.525,15.078)
O4': (56.975,107.664,15.346)
C5': (55.676,109.152,13.952)
P: (53.696,110.367,15.188)
O2: (58.713,103.943,15.016)
C4': (57.045,108.590,14.231)
C2': (58.546,106.808,13.785)
O2': (59.794,107.365,14.126)
N1: (56.901,105.342,14.999)
N3: (56.671,102.977,14.873)
N4: (54.591,102.038,14.733)
C6: (55.539,105.485,14.958)
C5: (54.732,104.420,14.878)
O3': (58.199,108.633,12.123)
OP1: (53.668,111.744,14.627)
OP2: (52.760,109.337,14.662)
C4: (55.344,103.133,14.828)
O5': (55.185,109.808,15.111)
C3': (57.596,107.773,13.085)
C1': (57.780,106.525,15.078)
O4': (56.975,107.664,15.346)
C5': (55.676,109.152,13.952)
P: (53.696,110.367,15.188)
O2: (58.713,103.943,15.016)
C4': (57.045,108.590,14.231)
C2': (58.546,106.808,13.785)
O2': (59.794,107.365,14.126)
N1: (56.901,105.342,14.999)
N3: (56.671,102.977,14.873)
N4: (54.591,102.038,14.733)
C6: (55.539,105.485,14.958)
C5: (54.732,104.420,14.878)
O3': (58.199,108.633,12.123)
Image (generated by PyMOL):