Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2338:A2340
Extra
PDB:
ATOM 1 O3' U A2337 -137.103 -43.794 52.233 1.00 0.01 O
ATOM 2 P G A2338 -137.175 -45.239 52.913 1.00 0.01 P
ATOM 3 OP1 G A2338 -138.493 -45.360 53.591 1.00 0.01 O
ATOM 4 OP2 G A2338 -135.933 -45.393 53.712 1.00 0.01 O
ATOM 5 O5' G A2338 -137.120 -46.201 51.652 1.00 0.01 O
ATOM 6 C5' G A2338 -136.003 -46.147 50.773 1.00 0.01 C
ATOM 7 C4' G A2338 -136.165 -47.052 49.582 1.00 0.01 C
ATOM 8 O4' G A2338 -136.264 -48.420 50.031 1.00 0.01 O
ATOM 9 C3' G A2338 -137.391 -46.788 48.747 1.00 0.01 C
ATOM 10 O3' G A2338 -137.092 -47.024 47.379 1.00 0.01 O
ATOM 11 C2' G A2338 -138.366 -47.829 49.254 1.00 0.01 C
ATOM 12 O2' G A2338 -139.356 -48.181 48.335 1.00 0.01 O
ATOM 13 C1' G A2338 -137.451 -48.992 49.556 1.00 0.01 C
ATOM 14 N9 G A2338 -137.954 -49.880 50.597 1.00 0.01 N
ATOM 15 C8 G A2338 -138.178 -49.426 51.858 1.00 0.01 C
ATOM 16 N7 G A2338 -138.608 -50.351 52.659 1.00 0.01 N
ATOM 17 C5 G A2338 -138.665 -51.489 51.897 1.00 0.01 C
ATOM 18 C6 G A2338 -139.084 -52.776 52.297 1.00 0.01 C
ATOM 19 O6 G A2338 -139.479 -53.156 53.427 1.00 0.01 O
ATOM 20 N1 G A2338 -139.016 -53.664 51.238 1.00 0.01 N
ATOM 21 C2 G A2338 -138.595 -53.333 49.995 1.00 0.01 C
ATOM 22 N2 G A2338 -138.599 -54.381 49.159 1.00 0.01 N
ATOM 23 N3 G A2338 -138.202 -52.123 49.604 1.00 0.01 N
ATOM 24 C4 G A2338 -138.265 -51.236 50.610 1.00 0.01 C
ATOM 25 P A A2339 -136.400 -45.871 46.489 1.00 0.01 P
ATOM 26 OP1 A A2339 -137.048 -44.603 46.839 1.00 0.01 O
ATOM 27 OP2 A A2339 -136.435 -46.327 45.079 1.00 0.01 O
ATOM 28 O5' A A2339 -134.898 -45.856 47.020 1.00 0.01 O
TER
ATOM 1 O3' A B2339 -130.682 -46.062 48.007 1.00 0.01 O
ATOM 2 P C B2340 -130.196 -47.425 48.750 1.00 0.01 P
ATOM 3 OP1 C B2340 -129.058 -47.039 49.633 1.00 0.01 O
ATOM 4 OP2 C B2340 -129.968 -48.437 47.701 1.00 0.01 O
ATOM 5 O5' C B2340 -131.438 -47.871 49.655 1.00 0.01 O
ATOM 6 C5' C B2340 -132.200 -46.915 50.373 1.00 0.01 C
ATOM 7 C4' C B2340 -132.416 -47.282 51.825 1.00 0.01 C
ATOM 8 O4' C B2340 -133.732 -47.833 52.027 1.00 0.01 O
ATOM 9 C3' C B2340 -131.539 -48.342 52.447 1.00 0.01 C
ATOM 10 O3' C B2340 -130.197 -47.933 52.635 1.00 0.01 O
ATOM 11 C2' C B2340 -132.299 -48.569 53.751 1.00 0.01 C
ATOM 12 O2' C B2340 -132.099 -47.484 54.643 1.00 0.01 O
ATOM 13 C1' C B2340 -133.738 -48.492 53.269 1.00 0.01 C
ATOM 14 N1 C B2340 -134.342 -49.801 53.138 1.00 0.01 N
ATOM 15 C2 C B2340 -134.681 -50.297 54.349 1.00 0.01 C
ATOM 16 O2 C B2340 -134.408 -49.583 55.300 1.00 0.01 O
ATOM 17 N3 C B2340 -135.277 -51.481 54.462 1.00 0.01 N
ATOM 18 C4 C B2340 -135.541 -52.177 53.396 1.00 0.01 C
ATOM 19 N4 C B2340 -136.128 -53.332 53.600 1.00 0.01 N
ATOM 20 C5 C B2340 -135.216 -51.705 52.110 1.00 0.01 C
ATOM 21 C6 C B2340 -134.617 -50.501 52.023 1.00 0.01 C
ATOM 22 P U B2341 -129.058 -49.027 52.886 1.00 0.01 P
ATOM 23 OP1 U B2341 -127.764 -48.352 52.743 1.00 0.01 O
ATOM 24 OP2 U B2341 -129.373 -50.175 52.013 1.00 0.01 O
ATOM 25 O5' U B2341 -129.269 -49.430 54.382 1.00 0.01 O
TER
ATOM 2 P G A2338 -137.175 -45.239 52.913 1.00 0.01 P
ATOM 3 OP1 G A2338 -138.493 -45.360 53.591 1.00 0.01 O
ATOM 4 OP2 G A2338 -135.933 -45.393 53.712 1.00 0.01 O
ATOM 5 O5' G A2338 -137.120 -46.201 51.652 1.00 0.01 O
ATOM 6 C5' G A2338 -136.003 -46.147 50.773 1.00 0.01 C
ATOM 7 C4' G A2338 -136.165 -47.052 49.582 1.00 0.01 C
ATOM 8 O4' G A2338 -136.264 -48.420 50.031 1.00 0.01 O
ATOM 9 C3' G A2338 -137.391 -46.788 48.747 1.00 0.01 C
ATOM 10 O3' G A2338 -137.092 -47.024 47.379 1.00 0.01 O
ATOM 11 C2' G A2338 -138.366 -47.829 49.254 1.00 0.01 C
ATOM 12 O2' G A2338 -139.356 -48.181 48.335 1.00 0.01 O
ATOM 13 C1' G A2338 -137.451 -48.992 49.556 1.00 0.01 C
ATOM 14 N9 G A2338 -137.954 -49.880 50.597 1.00 0.01 N
ATOM 15 C8 G A2338 -138.178 -49.426 51.858 1.00 0.01 C
ATOM 16 N7 G A2338 -138.608 -50.351 52.659 1.00 0.01 N
ATOM 17 C5 G A2338 -138.665 -51.489 51.897 1.00 0.01 C
ATOM 18 C6 G A2338 -139.084 -52.776 52.297 1.00 0.01 C
ATOM 19 O6 G A2338 -139.479 -53.156 53.427 1.00 0.01 O
ATOM 20 N1 G A2338 -139.016 -53.664 51.238 1.00 0.01 N
ATOM 21 C2 G A2338 -138.595 -53.333 49.995 1.00 0.01 C
ATOM 22 N2 G A2338 -138.599 -54.381 49.159 1.00 0.01 N
ATOM 23 N3 G A2338 -138.202 -52.123 49.604 1.00 0.01 N
ATOM 24 C4 G A2338 -138.265 -51.236 50.610 1.00 0.01 C
ATOM 25 P A A2339 -136.400 -45.871 46.489 1.00 0.01 P
ATOM 26 OP1 A A2339 -137.048 -44.603 46.839 1.00 0.01 O
ATOM 27 OP2 A A2339 -136.435 -46.327 45.079 1.00 0.01 O
ATOM 28 O5' A A2339 -134.898 -45.856 47.020 1.00 0.01 O
TER
ATOM 1 O3' A B2339 -130.682 -46.062 48.007 1.00 0.01 O
ATOM 2 P C B2340 -130.196 -47.425 48.750 1.00 0.01 P
ATOM 3 OP1 C B2340 -129.058 -47.039 49.633 1.00 0.01 O
ATOM 4 OP2 C B2340 -129.968 -48.437 47.701 1.00 0.01 O
ATOM 5 O5' C B2340 -131.438 -47.871 49.655 1.00 0.01 O
ATOM 6 C5' C B2340 -132.200 -46.915 50.373 1.00 0.01 C
ATOM 7 C4' C B2340 -132.416 -47.282 51.825 1.00 0.01 C
ATOM 8 O4' C B2340 -133.732 -47.833 52.027 1.00 0.01 O
ATOM 9 C3' C B2340 -131.539 -48.342 52.447 1.00 0.01 C
ATOM 10 O3' C B2340 -130.197 -47.933 52.635 1.00 0.01 O
ATOM 11 C2' C B2340 -132.299 -48.569 53.751 1.00 0.01 C
ATOM 12 O2' C B2340 -132.099 -47.484 54.643 1.00 0.01 O
ATOM 13 C1' C B2340 -133.738 -48.492 53.269 1.00 0.01 C
ATOM 14 N1 C B2340 -134.342 -49.801 53.138 1.00 0.01 N
ATOM 15 C2 C B2340 -134.681 -50.297 54.349 1.00 0.01 C
ATOM 16 O2 C B2340 -134.408 -49.583 55.300 1.00 0.01 O
ATOM 17 N3 C B2340 -135.277 -51.481 54.462 1.00 0.01 N
ATOM 18 C4 C B2340 -135.541 -52.177 53.396 1.00 0.01 C
ATOM 19 N4 C B2340 -136.128 -53.332 53.600 1.00 0.01 N
ATOM 20 C5 C B2340 -135.216 -51.705 52.110 1.00 0.01 C
ATOM 21 C6 C B2340 -134.617 -50.501 52.023 1.00 0.01 C
ATOM 22 P U B2341 -129.058 -49.027 52.886 1.00 0.01 P
ATOM 23 OP1 U B2341 -127.764 -48.352 52.743 1.00 0.01 O
ATOM 24 OP2 U B2341 -129.373 -50.175 52.013 1.00 0.01 O
ATOM 25 O5' U B2341 -129.269 -49.430 54.382 1.00 0.01 O
TER
Atoms:
OP1: (-138.493,-45.360,53.591)
OP2: (-135.933,-45.393,53.712)
C3': (-137.391,-46.788,48.747)
C1': (-137.451,-48.992,49.556)
C5': (-136.003,-46.147,50.773)
O6: (-139.479,-53.156,53.427)
O4': (-136.264,-48.420,50.031)
C8: (-138.178,-49.426,51.858)
C2: (-138.595,-53.333,49.995)
C6: (-139.084,-52.776,52.297)
C5: (-138.665,-51.489,51.897)
C4: (-138.265,-51.236,50.610)
P: (-137.175,-45.239,52.913)
C4': (-136.165,-47.052,49.582)
C2': (-138.366,-47.829,49.254)
O2': (-139.356,-48.181,48.335)
N1: (-139.016,-53.664,51.238)
N2: (-138.599,-54.381,49.159)
N3: (-138.202,-52.123,49.604)
N7: (-138.608,-50.351,52.659)
N9: (-137.954,-49.880,50.597)
O5': (-137.120,-46.201,51.652)
O3': (-137.092,-47.024,47.379)
OP2: (-135.933,-45.393,53.712)
C3': (-137.391,-46.788,48.747)
C1': (-137.451,-48.992,49.556)
C5': (-136.003,-46.147,50.773)
O6: (-139.479,-53.156,53.427)
O4': (-136.264,-48.420,50.031)
C8: (-138.178,-49.426,51.858)
C2: (-138.595,-53.333,49.995)
C6: (-139.084,-52.776,52.297)
C5: (-138.665,-51.489,51.897)
C4: (-138.265,-51.236,50.610)
P: (-137.175,-45.239,52.913)
C4': (-136.165,-47.052,49.582)
C2': (-138.366,-47.829,49.254)
O2': (-139.356,-48.181,48.335)
N1: (-139.016,-53.664,51.238)
N2: (-138.599,-54.381,49.159)
N3: (-138.202,-52.123,49.604)
N7: (-138.608,-50.351,52.659)
N9: (-137.954,-49.880,50.597)
O5': (-137.120,-46.201,51.652)
O3': (-137.092,-47.024,47.379)
C2: (-134.681,-50.297,54.349)
OP1: (-129.058,-47.039,49.633)
OP2: (-129.968,-48.437,47.701)
C4: (-135.541,-52.177,53.396)
O5': (-131.438,-47.871,49.655)
C3': (-131.539,-48.342,52.447)
C1': (-133.738,-48.492,53.269)
O4': (-133.732,-47.833,52.027)
C5': (-132.200,-46.915,50.373)
P: (-130.196,-47.425,48.750)
O2: (-134.408,-49.583,55.300)
C4': (-132.416,-47.282,51.825)
C2': (-132.299,-48.569,53.751)
O2': (-132.099,-47.484,54.643)
N1: (-134.342,-49.801,53.138)
N3: (-135.277,-51.481,54.462)
N4: (-136.128,-53.332,53.600)
C6: (-134.617,-50.501,52.023)
C5: (-135.216,-51.705,52.110)
O3': (-130.197,-47.933,52.635)
OP1: (-129.058,-47.039,49.633)
OP2: (-129.968,-48.437,47.701)
C4: (-135.541,-52.177,53.396)
O5': (-131.438,-47.871,49.655)
C3': (-131.539,-48.342,52.447)
C1': (-133.738,-48.492,53.269)
O4': (-133.732,-47.833,52.027)
C5': (-132.200,-46.915,50.373)
P: (-130.196,-47.425,48.750)
O2: (-134.408,-49.583,55.300)
C4': (-132.416,-47.282,51.825)
C2': (-132.299,-48.569,53.751)
O2': (-132.099,-47.484,54.643)
N1: (-134.342,-49.801,53.138)
N3: (-135.277,-51.481,54.462)
N4: (-136.128,-53.332,53.600)
C6: (-134.617,-50.501,52.023)
C5: (-135.216,-51.705,52.110)
O3': (-130.197,-47.933,52.635)
Image (generated by PyMOL):