Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1018:A1086
Extra
PDB:
ATOM 1 O3' A A1017 54.628 99.121 110.450 1.00 40.33 O
ATOM 2 P G A1018 53.383 98.242 110.953 1.00 41.85 P
ATOM 3 OP1 G A1018 52.993 98.819 112.276 1.00 41.07 O
ATOM 4 OP2 G A1018 53.704 96.798 110.843 1.00 40.98 O
ATOM 5 O5' G A1018 52.248 98.538 109.881 1.00 42.70 O
ATOM 6 C5' G A1018 51.691 99.843 109.741 1.00 40.69 C
ATOM 7 C4' G A1018 51.826 100.298 108.315 1.00 39.95 C
ATOM 8 O4' G A1018 51.251 101.615 108.192 1.00 39.92 O
ATOM 9 C3' G A1018 53.250 100.411 107.783 1.00 39.71 C
ATOM 10 O3' G A1018 53.205 100.268 106.373 1.00 39.29 O
ATOM 11 C2' G A1018 53.574 101.866 108.061 1.00 39.99 C
ATOM 12 O2' G A1018 54.546 102.326 107.160 1.00 42.09 O
ATOM 13 C1' G A1018 52.232 102.511 107.735 1.00 40.66 C
ATOM 14 N9 G A1018 51.952 103.805 108.340 1.00 41.04 N
ATOM 15 C8 G A1018 52.547 104.392 109.422 1.00 42.03 C
ATOM 16 N7 G A1018 52.026 105.551 109.726 1.00 40.83 N
ATOM 17 C5 G A1018 51.035 105.736 108.784 1.00 41.23 C
ATOM 18 C6 G A1018 50.124 106.792 108.620 1.00 42.11 C
ATOM 19 O6 G A1018 50.024 107.831 109.284 1.00 41.99 O
ATOM 20 N1 G A1018 49.254 106.560 107.554 1.00 43.59 N
ATOM 21 C2 G A1018 49.269 105.448 106.746 1.00 44.39 C
ATOM 22 N2 G A1018 48.321 105.373 105.787 1.00 44.78 N
ATOM 23 N3 G A1018 50.145 104.467 106.878 1.00 43.52 N
ATOM 24 C4 G A1018 50.982 104.671 107.917 1.00 41.79 C
ATOM 25 P C A1019 54.066 99.133 105.638 1.00 41.32 P
ATOM 26 OP1 C A1019 53.647 99.195 104.214 1.00 41.41 O
ATOM 27 OP2 C A1019 53.915 97.865 106.383 1.00 42.09 O
ATOM 28 O5' C A1019 55.580 99.629 105.724 1.00 40.20 O
TER
ATOM 1 O3' C B1085 45.656 99.352 112.124 1.00 40.84 O
ATOM 2 P C B1086 47.095 99.431 111.402 1.00 41.36 P
ATOM 3 OP1 C B1086 46.969 100.208 110.143 1.00 42.61 O
ATOM 4 OP2 C B1086 47.660 98.069 111.358 1.00 40.05 O
ATOM 5 O5' C B1086 47.947 100.326 112.394 1.00 39.73 O
ATOM 6 C5' C B1086 49.244 99.915 112.825 1.00 40.73 C
ATOM 7 C4' C B1086 50.058 101.120 113.161 1.00 41.47 C
ATOM 8 O4' C B1086 50.206 101.955 111.992 1.00 40.53 O
ATOM 9 C3' C B1086 49.339 101.995 114.156 1.00 41.27 C
ATOM 10 O3' C B1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 11 C2' C B1086 49.918 103.373 113.891 1.00 41.11 C
ATOM 12 O2' C B1086 51.145 103.590 114.557 1.00 42.01 O
ATOM 13 C1' C B1086 50.134 103.318 112.377 1.00 39.76 C
ATOM 14 N1 C B1086 49.100 103.983 111.568 1.00 39.52 N
ATOM 15 C2 C B1086 48.948 105.383 111.664 1.00 38.72 C
ATOM 16 O2 C B1086 49.581 106.005 112.526 1.00 38.82 O
ATOM 17 N3 C B1086 48.099 106.009 110.822 1.00 38.00 N
ATOM 18 C4 C B1086 47.401 105.298 109.934 1.00 38.17 C
ATOM 19 N4 C B1086 46.622 105.951 109.070 1.00 38.02 N
ATOM 20 C5 C B1086 47.481 103.876 109.875 1.00 38.07 C
ATOM 21 C6 C B1086 48.325 103.265 110.701 1.00 38.11 C
ATOM 22 P U B1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 23 OP1 U B1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 24 OP2 U B1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 25 O5' U B1087 47.527 102.512 116.358 1.00 43.86 O
TER
ATOM 2 P G A1018 53.383 98.242 110.953 1.00 41.85 P
ATOM 3 OP1 G A1018 52.993 98.819 112.276 1.00 41.07 O
ATOM 4 OP2 G A1018 53.704 96.798 110.843 1.00 40.98 O
ATOM 5 O5' G A1018 52.248 98.538 109.881 1.00 42.70 O
ATOM 6 C5' G A1018 51.691 99.843 109.741 1.00 40.69 C
ATOM 7 C4' G A1018 51.826 100.298 108.315 1.00 39.95 C
ATOM 8 O4' G A1018 51.251 101.615 108.192 1.00 39.92 O
ATOM 9 C3' G A1018 53.250 100.411 107.783 1.00 39.71 C
ATOM 10 O3' G A1018 53.205 100.268 106.373 1.00 39.29 O
ATOM 11 C2' G A1018 53.574 101.866 108.061 1.00 39.99 C
ATOM 12 O2' G A1018 54.546 102.326 107.160 1.00 42.09 O
ATOM 13 C1' G A1018 52.232 102.511 107.735 1.00 40.66 C
ATOM 14 N9 G A1018 51.952 103.805 108.340 1.00 41.04 N
ATOM 15 C8 G A1018 52.547 104.392 109.422 1.00 42.03 C
ATOM 16 N7 G A1018 52.026 105.551 109.726 1.00 40.83 N
ATOM 17 C5 G A1018 51.035 105.736 108.784 1.00 41.23 C
ATOM 18 C6 G A1018 50.124 106.792 108.620 1.00 42.11 C
ATOM 19 O6 G A1018 50.024 107.831 109.284 1.00 41.99 O
ATOM 20 N1 G A1018 49.254 106.560 107.554 1.00 43.59 N
ATOM 21 C2 G A1018 49.269 105.448 106.746 1.00 44.39 C
ATOM 22 N2 G A1018 48.321 105.373 105.787 1.00 44.78 N
ATOM 23 N3 G A1018 50.145 104.467 106.878 1.00 43.52 N
ATOM 24 C4 G A1018 50.982 104.671 107.917 1.00 41.79 C
ATOM 25 P C A1019 54.066 99.133 105.638 1.00 41.32 P
ATOM 26 OP1 C A1019 53.647 99.195 104.214 1.00 41.41 O
ATOM 27 OP2 C A1019 53.915 97.865 106.383 1.00 42.09 O
ATOM 28 O5' C A1019 55.580 99.629 105.724 1.00 40.20 O
TER
ATOM 1 O3' C B1085 45.656 99.352 112.124 1.00 40.84 O
ATOM 2 P C B1086 47.095 99.431 111.402 1.00 41.36 P
ATOM 3 OP1 C B1086 46.969 100.208 110.143 1.00 42.61 O
ATOM 4 OP2 C B1086 47.660 98.069 111.358 1.00 40.05 O
ATOM 5 O5' C B1086 47.947 100.326 112.394 1.00 39.73 O
ATOM 6 C5' C B1086 49.244 99.915 112.825 1.00 40.73 C
ATOM 7 C4' C B1086 50.058 101.120 113.161 1.00 41.47 C
ATOM 8 O4' C B1086 50.206 101.955 111.992 1.00 40.53 O
ATOM 9 C3' C B1086 49.339 101.995 114.156 1.00 41.27 C
ATOM 10 O3' C B1086 49.616 101.521 115.447 1.00 42.93 O
ATOM 11 C2' C B1086 49.918 103.373 113.891 1.00 41.11 C
ATOM 12 O2' C B1086 51.145 103.590 114.557 1.00 42.01 O
ATOM 13 C1' C B1086 50.134 103.318 112.377 1.00 39.76 C
ATOM 14 N1 C B1086 49.100 103.983 111.568 1.00 39.52 N
ATOM 15 C2 C B1086 48.948 105.383 111.664 1.00 38.72 C
ATOM 16 O2 C B1086 49.581 106.005 112.526 1.00 38.82 O
ATOM 17 N3 C B1086 48.099 106.009 110.822 1.00 38.00 N
ATOM 18 C4 C B1086 47.401 105.298 109.934 1.00 38.17 C
ATOM 19 N4 C B1086 46.622 105.951 109.070 1.00 38.02 N
ATOM 20 C5 C B1086 47.481 103.876 109.875 1.00 38.07 C
ATOM 21 C6 C B1086 48.325 103.265 110.701 1.00 38.11 C
ATOM 22 P U B1087 48.414 101.201 116.442 1.00 43.32 P
ATOM 23 OP1 U B1087 49.039 101.128 117.758 1.00 43.74 O
ATOM 24 OP2 U B1087 47.638 100.035 115.926 1.00 44.01 O
ATOM 25 O5' U B1087 47.527 102.512 116.358 1.00 43.86 O
TER
Atoms:
OP1: (52.993,98.819,112.276)
OP2: (53.704,96.798,110.843)
C3': (53.250,100.411,107.783)
C1': (52.232,102.511,107.735)
C5': (51.691,99.843,109.741)
O6: (50.024,107.831,109.284)
O4': (51.251,101.615,108.192)
C8: (52.547,104.392,109.422)
C2: (49.269,105.448,106.746)
C6: (50.124,106.792,108.620)
C5: (51.035,105.736,108.784)
C4: (50.982,104.671,107.917)
P: (53.383,98.242,110.953)
C4': (51.826,100.298,108.315)
C2': (53.574,101.866,108.061)
O2': (54.546,102.326,107.160)
N1: (49.254,106.560,107.554)
N2: (48.321,105.373,105.787)
N3: (50.145,104.467,106.878)
N7: (52.026,105.551,109.726)
N9: (51.952,103.805,108.340)
O5': (52.248,98.538,109.881)
O3': (53.205,100.268,106.373)
OP2: (53.704,96.798,110.843)
C3': (53.250,100.411,107.783)
C1': (52.232,102.511,107.735)
C5': (51.691,99.843,109.741)
O6: (50.024,107.831,109.284)
O4': (51.251,101.615,108.192)
C8: (52.547,104.392,109.422)
C2: (49.269,105.448,106.746)
C6: (50.124,106.792,108.620)
C5: (51.035,105.736,108.784)
C4: (50.982,104.671,107.917)
P: (53.383,98.242,110.953)
C4': (51.826,100.298,108.315)
C2': (53.574,101.866,108.061)
O2': (54.546,102.326,107.160)
N1: (49.254,106.560,107.554)
N2: (48.321,105.373,105.787)
N3: (50.145,104.467,106.878)
N7: (52.026,105.551,109.726)
N9: (51.952,103.805,108.340)
O5': (52.248,98.538,109.881)
O3': (53.205,100.268,106.373)
C2: (48.948,105.383,111.664)
OP1: (46.969,100.208,110.143)
OP2: (47.660,98.069,111.358)
C4: (47.401,105.298,109.934)
O5': (47.947,100.326,112.394)
C3': (49.339,101.995,114.156)
C1': (50.134,103.318,112.377)
O4': (50.206,101.955,111.992)
C5': (49.244,99.915,112.825)
P: (47.095,99.431,111.402)
O2: (49.581,106.005,112.526)
C4': (50.058,101.120,113.161)
C2': (49.918,103.373,113.891)
O2': (51.145,103.590,114.557)
N1: (49.100,103.983,111.568)
N3: (48.099,106.009,110.822)
N4: (46.622,105.951,109.070)
C6: (48.325,103.265,110.701)
C5: (47.481,103.876,109.875)
O3': (49.616,101.521,115.447)
OP1: (46.969,100.208,110.143)
OP2: (47.660,98.069,111.358)
C4: (47.401,105.298,109.934)
O5': (47.947,100.326,112.394)
C3': (49.339,101.995,114.156)
C1': (50.134,103.318,112.377)
O4': (50.206,101.955,111.992)
C5': (49.244,99.915,112.825)
P: (47.095,99.431,111.402)
O2: (49.581,106.005,112.526)
C4': (50.058,101.120,113.161)
C2': (49.918,103.373,113.891)
O2': (51.145,103.590,114.557)
N1: (49.100,103.983,111.568)
N3: (48.099,106.009,110.822)
N4: (46.622,105.951,109.070)
C6: (48.325,103.265,110.701)
C5: (47.481,103.876,109.875)
O3': (49.616,101.521,115.447)
Image (generated by PyMOL):