Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E44:E8
Extra
PDB:
ATOM 1 O3' G A 43 -11.643 28.866 -5.245 1.00 21.47 O
ATOM 2 P G A 44 -12.162 28.255 -3.855 1.00 21.54 P
ATOM 3 OP1 G A 44 -11.135 27.288 -3.387 1.00 23.37 O
ATOM 4 OP2 G A 44 -13.564 27.805 -4.037 1.00 23.59 O
ATOM 5 O5' G A 44 -12.165 29.498 -2.859 1.00 20.93 O
ATOM 6 C5' G A 44 -11.008 30.311 -2.707 1.00 17.99 C
ATOM 7 C4' G A 44 -11.255 31.377 -1.670 1.00 18.90 C
ATOM 8 O4' G A 44 -12.368 32.205 -2.095 1.00 17.07 O
ATOM 9 C3' G A 44 -11.685 30.875 -0.303 1.00 19.90 C
ATOM 10 O3' G A 44 -10.553 30.511 0.475 1.00 24.17 O
ATOM 11 C2' G A 44 -12.386 32.095 0.281 1.00 19.40 C
ATOM 12 O2' G A 44 -11.480 33.039 0.815 1.00 20.87 O
ATOM 13 C1' G A 44 -13.066 32.681 -0.958 1.00 17.44 C
ATOM 14 N9 G A 44 -14.472 32.315 -1.093 1.00 15.83 N
ATOM 15 C8 G A 44 -14.999 31.048 -1.159 1.00 14.41 C
ATOM 16 N7 G A 44 -16.300 31.040 -1.267 1.00 13.66 N
ATOM 17 C5 G A 44 -16.653 32.383 -1.276 1.00 12.82 C
ATOM 18 C6 G A 44 -17.929 32.998 -1.368 1.00 11.90 C
ATOM 19 O6 G A 44 -19.038 32.461 -1.460 1.00 13.88 O
ATOM 20 N1 G A 44 -17.832 34.384 -1.341 1.00 10.59 N
ATOM 21 C2 G A 44 -16.660 35.092 -1.236 1.00 12.22 C
ATOM 22 N2 G A 44 -16.776 36.429 -1.224 1.00 8.47 N
ATOM 23 N3 G A 44 -15.464 34.532 -1.148 1.00 12.84 N
ATOM 24 C4 G A 44 -15.536 33.183 -1.172 1.00 14.34 C
ATOM 25 P U A 45 -10.742 29.562 1.755 1.00 23.49 P
ATOM 26 OP1 U A 45 -9.407 29.363 2.372 1.00 25.85 O
ATOM 27 OP2 U A 45 -11.534 28.384 1.318 1.00 23.70 O
ATOM 28 O5' U A 45 -11.640 30.427 2.746 1.00 26.75 O
TER
ATOM 1 O3' U B 7 -10.978 35.773 1.015 1.00 28.63 O
ATOM 2 P C B 8 -10.332 36.420 -0.307 1.00 28.43 P
ATOM 3 OP1 C B 8 -9.383 35.435 -0.888 1.00 27.97 O
ATOM 4 OP2 C B 8 -9.851 37.782 0.047 1.00 31.63 O
ATOM 5 O5' C B 8 -11.563 36.577 -1.305 1.00 26.78 O
ATOM 6 C5' C B 8 -11.356 36.523 -2.711 1.00 24.57 C
ATOM 7 C4' C B 8 -11.358 35.087 -3.168 1.00 22.73 C
ATOM 8 O4' C B 8 -12.705 34.559 -3.043 1.00 21.32 O
ATOM 9 C3' C B 8 -10.922 34.845 -4.609 1.00 21.39 C
ATOM 10 O3' C B 8 -10.212 33.612 -4.650 1.00 18.09 O
ATOM 11 C2' C B 8 -12.250 34.704 -5.350 1.00 20.84 C
ATOM 12 O2' C B 8 -12.171 33.905 -6.512 1.00 20.48 O
ATOM 13 C1' C B 8 -13.135 34.053 -4.287 1.00 20.38 C
ATOM 14 N1 C B 8 -14.562 34.371 -4.444 1.00 19.26 N
ATOM 15 C2 C B 8 -15.461 33.332 -4.702 1.00 19.37 C
ATOM 16 O2 C B 8 -15.033 32.170 -4.770 1.00 20.91 O
ATOM 17 N3 C B 8 -16.772 33.617 -4.867 1.00 17.76 N
ATOM 18 C4 C B 8 -17.195 34.879 -4.777 1.00 19.12 C
ATOM 19 N4 C B 8 -18.496 35.116 -4.944 1.00 21.47 N
ATOM 20 C5 C B 8 -16.301 35.956 -4.510 1.00 20.14 C
ATOM 21 C6 C B 8 -15.006 35.660 -4.351 1.00 19.62 C
ATOM 22 P G B 9 -8.620 33.607 -4.424 1.00 14.61 P
ATOM 23 OP1 G B 9 -8.116 32.269 -4.825 1.00 15.47 O
ATOM 24 OP2 G B 9 -8.341 34.117 -3.055 1.00 13.65 O
ATOM 25 O5' G B 9 -8.084 34.679 -5.473 1.00 14.73 O
TER
ATOM 2 P G A 44 -12.162 28.255 -3.855 1.00 21.54 P
ATOM 3 OP1 G A 44 -11.135 27.288 -3.387 1.00 23.37 O
ATOM 4 OP2 G A 44 -13.564 27.805 -4.037 1.00 23.59 O
ATOM 5 O5' G A 44 -12.165 29.498 -2.859 1.00 20.93 O
ATOM 6 C5' G A 44 -11.008 30.311 -2.707 1.00 17.99 C
ATOM 7 C4' G A 44 -11.255 31.377 -1.670 1.00 18.90 C
ATOM 8 O4' G A 44 -12.368 32.205 -2.095 1.00 17.07 O
ATOM 9 C3' G A 44 -11.685 30.875 -0.303 1.00 19.90 C
ATOM 10 O3' G A 44 -10.553 30.511 0.475 1.00 24.17 O
ATOM 11 C2' G A 44 -12.386 32.095 0.281 1.00 19.40 C
ATOM 12 O2' G A 44 -11.480 33.039 0.815 1.00 20.87 O
ATOM 13 C1' G A 44 -13.066 32.681 -0.958 1.00 17.44 C
ATOM 14 N9 G A 44 -14.472 32.315 -1.093 1.00 15.83 N
ATOM 15 C8 G A 44 -14.999 31.048 -1.159 1.00 14.41 C
ATOM 16 N7 G A 44 -16.300 31.040 -1.267 1.00 13.66 N
ATOM 17 C5 G A 44 -16.653 32.383 -1.276 1.00 12.82 C
ATOM 18 C6 G A 44 -17.929 32.998 -1.368 1.00 11.90 C
ATOM 19 O6 G A 44 -19.038 32.461 -1.460 1.00 13.88 O
ATOM 20 N1 G A 44 -17.832 34.384 -1.341 1.00 10.59 N
ATOM 21 C2 G A 44 -16.660 35.092 -1.236 1.00 12.22 C
ATOM 22 N2 G A 44 -16.776 36.429 -1.224 1.00 8.47 N
ATOM 23 N3 G A 44 -15.464 34.532 -1.148 1.00 12.84 N
ATOM 24 C4 G A 44 -15.536 33.183 -1.172 1.00 14.34 C
ATOM 25 P U A 45 -10.742 29.562 1.755 1.00 23.49 P
ATOM 26 OP1 U A 45 -9.407 29.363 2.372 1.00 25.85 O
ATOM 27 OP2 U A 45 -11.534 28.384 1.318 1.00 23.70 O
ATOM 28 O5' U A 45 -11.640 30.427 2.746 1.00 26.75 O
TER
ATOM 1 O3' U B 7 -10.978 35.773 1.015 1.00 28.63 O
ATOM 2 P C B 8 -10.332 36.420 -0.307 1.00 28.43 P
ATOM 3 OP1 C B 8 -9.383 35.435 -0.888 1.00 27.97 O
ATOM 4 OP2 C B 8 -9.851 37.782 0.047 1.00 31.63 O
ATOM 5 O5' C B 8 -11.563 36.577 -1.305 1.00 26.78 O
ATOM 6 C5' C B 8 -11.356 36.523 -2.711 1.00 24.57 C
ATOM 7 C4' C B 8 -11.358 35.087 -3.168 1.00 22.73 C
ATOM 8 O4' C B 8 -12.705 34.559 -3.043 1.00 21.32 O
ATOM 9 C3' C B 8 -10.922 34.845 -4.609 1.00 21.39 C
ATOM 10 O3' C B 8 -10.212 33.612 -4.650 1.00 18.09 O
ATOM 11 C2' C B 8 -12.250 34.704 -5.350 1.00 20.84 C
ATOM 12 O2' C B 8 -12.171 33.905 -6.512 1.00 20.48 O
ATOM 13 C1' C B 8 -13.135 34.053 -4.287 1.00 20.38 C
ATOM 14 N1 C B 8 -14.562 34.371 -4.444 1.00 19.26 N
ATOM 15 C2 C B 8 -15.461 33.332 -4.702 1.00 19.37 C
ATOM 16 O2 C B 8 -15.033 32.170 -4.770 1.00 20.91 O
ATOM 17 N3 C B 8 -16.772 33.617 -4.867 1.00 17.76 N
ATOM 18 C4 C B 8 -17.195 34.879 -4.777 1.00 19.12 C
ATOM 19 N4 C B 8 -18.496 35.116 -4.944 1.00 21.47 N
ATOM 20 C5 C B 8 -16.301 35.956 -4.510 1.00 20.14 C
ATOM 21 C6 C B 8 -15.006 35.660 -4.351 1.00 19.62 C
ATOM 22 P G B 9 -8.620 33.607 -4.424 1.00 14.61 P
ATOM 23 OP1 G B 9 -8.116 32.269 -4.825 1.00 15.47 O
ATOM 24 OP2 G B 9 -8.341 34.117 -3.055 1.00 13.65 O
ATOM 25 O5' G B 9 -8.084 34.679 -5.473 1.00 14.73 O
TER
Atoms:
OP1: (-11.135,27.288,-3.387)
OP2: (-13.564,27.805,-4.037)
C3': (-11.685,30.875,-0.303)
C1': (-13.066,32.681,-0.958)
C5': (-11.008,30.311,-2.707)
O6: (-19.038,32.461,-1.460)
O4': (-12.368,32.205,-2.095)
C8: (-14.999,31.048,-1.159)
C2: (-16.660,35.092,-1.236)
C6: (-17.929,32.998,-1.368)
C5: (-16.653,32.383,-1.276)
C4: (-15.536,33.183,-1.172)
P: (-12.162,28.255,-3.855)
C4': (-11.255,31.377,-1.670)
C2': (-12.386,32.095,0.281)
O2': (-11.480,33.039,0.815)
N1: (-17.832,34.384,-1.341)
N2: (-16.776,36.429,-1.224)
N3: (-15.464,34.532,-1.148)
N7: (-16.300,31.040,-1.267)
N9: (-14.472,32.315,-1.093)
O5': (-12.165,29.498,-2.859)
O3': (-10.553,30.511,0.475)
OP2: (-13.564,27.805,-4.037)
C3': (-11.685,30.875,-0.303)
C1': (-13.066,32.681,-0.958)
C5': (-11.008,30.311,-2.707)
O6: (-19.038,32.461,-1.460)
O4': (-12.368,32.205,-2.095)
C8: (-14.999,31.048,-1.159)
C2: (-16.660,35.092,-1.236)
C6: (-17.929,32.998,-1.368)
C5: (-16.653,32.383,-1.276)
C4: (-15.536,33.183,-1.172)
P: (-12.162,28.255,-3.855)
C4': (-11.255,31.377,-1.670)
C2': (-12.386,32.095,0.281)
O2': (-11.480,33.039,0.815)
N1: (-17.832,34.384,-1.341)
N2: (-16.776,36.429,-1.224)
N3: (-15.464,34.532,-1.148)
N7: (-16.300,31.040,-1.267)
N9: (-14.472,32.315,-1.093)
O5': (-12.165,29.498,-2.859)
O3': (-10.553,30.511,0.475)
C2: (-15.461,33.332,-4.702)
OP1: (-9.383,35.435,-0.888)
OP2: (-9.851,37.782,0.047)
C4: (-17.195,34.879,-4.777)
O5': (-11.563,36.577,-1.305)
C3': (-10.922,34.845,-4.609)
C1': (-13.135,34.053,-4.287)
O4': (-12.705,34.559,-3.043)
C5': (-11.356,36.523,-2.711)
P: (-10.332,36.420,-0.307)
O2: (-15.033,32.170,-4.770)
C4': (-11.358,35.087,-3.168)
C2': (-12.250,34.704,-5.350)
O2': (-12.171,33.905,-6.512)
N1: (-14.562,34.371,-4.444)
N3: (-16.772,33.617,-4.867)
N4: (-18.496,35.116,-4.944)
C6: (-15.006,35.660,-4.351)
C5: (-16.301,35.956,-4.510)
O3': (-10.212,33.612,-4.650)
OP1: (-9.383,35.435,-0.888)
OP2: (-9.851,37.782,0.047)
C4: (-17.195,34.879,-4.777)
O5': (-11.563,36.577,-1.305)
C3': (-10.922,34.845,-4.609)
C1': (-13.135,34.053,-4.287)
O4': (-12.705,34.559,-3.043)
C5': (-11.356,36.523,-2.711)
P: (-10.332,36.420,-0.307)
O2: (-15.033,32.170,-4.770)
C4': (-11.358,35.087,-3.168)
C2': (-12.250,34.704,-5.350)
O2': (-12.171,33.905,-6.512)
N1: (-14.562,34.371,-4.444)
N3: (-16.772,33.617,-4.867)
N4: (-18.496,35.116,-4.944)
C6: (-15.006,35.660,-4.351)
C5: (-16.301,35.956,-4.510)
O3': (-10.212,33.612,-4.650)
Image (generated by PyMOL):