Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B33:B35
Extra
PDB:
ATOM 1 O3' A A 32 -21.117 35.336 3.932 1.00 58.21 O
ATOM 2 P G A 33 -22.640 34.943 4.224 1.00 61.87 P
ATOM 3 OP1 G A 33 -22.658 34.143 5.469 1.00 59.29 O
ATOM 4 OP2 G A 33 -23.220 34.392 2.977 1.00 57.77 O
ATOM 5 O5' G A 33 -23.323 36.354 4.536 1.00 54.55 O
ATOM 6 C5' G A 33 -23.572 37.280 3.488 1.00 53.36 C
ATOM 7 C4' G A 33 -23.205 38.679 3.944 1.00 52.39 C
ATOM 8 O4' G A 33 -21.761 38.800 3.937 1.00 48.95 O
ATOM 9 C3' G A 33 -23.726 39.800 3.056 1.00 53.25 C
ATOM 10 O3' G A 33 -24.960 40.277 3.577 1.00 59.46 O
ATOM 11 C2' G A 33 -22.641 40.868 3.160 1.00 50.75 C
ATOM 12 O2' G A 33 -22.876 41.757 4.236 1.00 47.48 O
ATOM 13 C1' G A 33 -21.371 40.059 3.423 1.00 48.74 C
ATOM 14 N9 G A 33 -20.516 39.841 2.254 1.00 49.12 N
ATOM 15 C8 G A 33 -19.142 39.870 2.245 1.00 45.58 C
ATOM 16 N7 G A 33 -18.621 39.642 1.072 1.00 44.80 N
ATOM 17 C5 G A 33 -19.719 39.452 0.244 1.00 44.79 C
ATOM 18 C6 G A 33 -19.772 39.170 -1.142 1.00 43.66 C
ATOM 19 O6 G A 33 -18.827 39.031 -1.932 1.00 41.14 O
ATOM 20 N1 G A 33 -21.083 39.050 -1.597 1.00 42.76 N
ATOM 21 C2 G A 33 -22.200 39.185 -0.808 1.00 44.28 C
ATOM 22 N2 G A 33 -23.382 39.038 -1.421 1.00 43.63 N
ATOM 23 N3 G A 33 -22.163 39.450 0.491 1.00 47.69 N
ATOM 24 C4 G A 33 -20.895 39.571 0.954 1.00 46.90 C
ATOM 25 P U A 34 -26.299 40.144 2.713 1.00 64.05 P
ATOM 26 OP1 U A 34 -27.412 40.689 3.526 1.00 56.91 O
ATOM 27 OP2 U A 34 -26.368 38.764 2.183 1.00 56.97 O
ATOM 28 O5' U A 34 -26.044 41.161 1.507 1.00 55.47 O
TER
ATOM 1 O3' U B 34 -23.898 45.364 1.293 1.00 51.68 O
ATOM 2 P C B 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 3 OP1 C B 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 4 OP2 C B 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 5 O5' C B 35 -21.708 44.444 2.056 1.00 44.08 O
ATOM 6 C5' C B 35 -20.582 44.311 2.912 1.00 44.79 C
ATOM 7 C4' C B 35 -19.310 44.170 2.099 1.00 44.08 C
ATOM 8 O4' C B 35 -19.283 42.870 1.457 1.00 40.73 O
ATOM 9 C3' C B 35 -19.162 45.164 0.955 1.00 39.97 C
ATOM 10 O3' C B 35 -18.600 46.377 1.418 1.00 41.85 O
ATOM 11 C2' C B 35 -18.175 44.422 0.068 1.00 41.26 C
ATOM 12 O2' C B 35 -16.865 44.480 0.593 1.00 38.65 O
ATOM 13 C1' C B 35 -18.700 42.996 0.174 1.00 39.86 C
ATOM 14 N1 C B 35 -19.716 42.649 -0.858 1.00 42.81 N
ATOM 15 C2 C B 35 -19.293 42.391 -2.165 1.00 42.57 C
ATOM 16 O2 C B 35 -18.087 42.465 -2.430 1.00 39.37 O
ATOM 17 N3 C B 35 -20.215 42.070 -3.105 1.00 43.03 N
ATOM 18 C4 C B 35 -21.505 42.001 -2.776 1.00 44.65 C
ATOM 19 N4 C B 35 -22.376 41.679 -3.739 1.00 42.63 N
ATOM 20 C5 C B 35 -21.957 42.261 -1.448 1.00 47.05 C
ATOM 21 C6 C B 35 -21.037 42.576 -0.529 1.00 44.02 C
ATOM 22 P C B 36 -18.893 47.736 0.625 1.00 43.00 P
ATOM 23 OP1 C B 36 -18.302 48.843 1.408 1.00 41.08 O
ATOM 24 OP2 C B 36 -20.326 47.752 0.260 1.00 42.94 O
ATOM 25 O5' C B 36 -18.035 47.573 -0.716 1.00 41.53 O
TER
ATOM 2 P G A 33 -22.640 34.943 4.224 1.00 61.87 P
ATOM 3 OP1 G A 33 -22.658 34.143 5.469 1.00 59.29 O
ATOM 4 OP2 G A 33 -23.220 34.392 2.977 1.00 57.77 O
ATOM 5 O5' G A 33 -23.323 36.354 4.536 1.00 54.55 O
ATOM 6 C5' G A 33 -23.572 37.280 3.488 1.00 53.36 C
ATOM 7 C4' G A 33 -23.205 38.679 3.944 1.00 52.39 C
ATOM 8 O4' G A 33 -21.761 38.800 3.937 1.00 48.95 O
ATOM 9 C3' G A 33 -23.726 39.800 3.056 1.00 53.25 C
ATOM 10 O3' G A 33 -24.960 40.277 3.577 1.00 59.46 O
ATOM 11 C2' G A 33 -22.641 40.868 3.160 1.00 50.75 C
ATOM 12 O2' G A 33 -22.876 41.757 4.236 1.00 47.48 O
ATOM 13 C1' G A 33 -21.371 40.059 3.423 1.00 48.74 C
ATOM 14 N9 G A 33 -20.516 39.841 2.254 1.00 49.12 N
ATOM 15 C8 G A 33 -19.142 39.870 2.245 1.00 45.58 C
ATOM 16 N7 G A 33 -18.621 39.642 1.072 1.00 44.80 N
ATOM 17 C5 G A 33 -19.719 39.452 0.244 1.00 44.79 C
ATOM 18 C6 G A 33 -19.772 39.170 -1.142 1.00 43.66 C
ATOM 19 O6 G A 33 -18.827 39.031 -1.932 1.00 41.14 O
ATOM 20 N1 G A 33 -21.083 39.050 -1.597 1.00 42.76 N
ATOM 21 C2 G A 33 -22.200 39.185 -0.808 1.00 44.28 C
ATOM 22 N2 G A 33 -23.382 39.038 -1.421 1.00 43.63 N
ATOM 23 N3 G A 33 -22.163 39.450 0.491 1.00 47.69 N
ATOM 24 C4 G A 33 -20.895 39.571 0.954 1.00 46.90 C
ATOM 25 P U A 34 -26.299 40.144 2.713 1.00 64.05 P
ATOM 26 OP1 U A 34 -27.412 40.689 3.526 1.00 56.91 O
ATOM 27 OP2 U A 34 -26.368 38.764 2.183 1.00 56.97 O
ATOM 28 O5' U A 34 -26.044 41.161 1.507 1.00 55.47 O
TER
ATOM 1 O3' U B 34 -23.898 45.364 1.293 1.00 51.68 O
ATOM 2 P C B 35 -23.058 45.085 2.627 1.00 55.72 P
ATOM 3 OP1 C B 35 -23.759 44.055 3.423 1.00 46.91 O
ATOM 4 OP2 C B 35 -22.737 46.395 3.238 1.00 53.90 O
ATOM 5 O5' C B 35 -21.708 44.444 2.056 1.00 44.08 O
ATOM 6 C5' C B 35 -20.582 44.311 2.912 1.00 44.79 C
ATOM 7 C4' C B 35 -19.310 44.170 2.099 1.00 44.08 C
ATOM 8 O4' C B 35 -19.283 42.870 1.457 1.00 40.73 O
ATOM 9 C3' C B 35 -19.162 45.164 0.955 1.00 39.97 C
ATOM 10 O3' C B 35 -18.600 46.377 1.418 1.00 41.85 O
ATOM 11 C2' C B 35 -18.175 44.422 0.068 1.00 41.26 C
ATOM 12 O2' C B 35 -16.865 44.480 0.593 1.00 38.65 O
ATOM 13 C1' C B 35 -18.700 42.996 0.174 1.00 39.86 C
ATOM 14 N1 C B 35 -19.716 42.649 -0.858 1.00 42.81 N
ATOM 15 C2 C B 35 -19.293 42.391 -2.165 1.00 42.57 C
ATOM 16 O2 C B 35 -18.087 42.465 -2.430 1.00 39.37 O
ATOM 17 N3 C B 35 -20.215 42.070 -3.105 1.00 43.03 N
ATOM 18 C4 C B 35 -21.505 42.001 -2.776 1.00 44.65 C
ATOM 19 N4 C B 35 -22.376 41.679 -3.739 1.00 42.63 N
ATOM 20 C5 C B 35 -21.957 42.261 -1.448 1.00 47.05 C
ATOM 21 C6 C B 35 -21.037 42.576 -0.529 1.00 44.02 C
ATOM 22 P C B 36 -18.893 47.736 0.625 1.00 43.00 P
ATOM 23 OP1 C B 36 -18.302 48.843 1.408 1.00 41.08 O
ATOM 24 OP2 C B 36 -20.326 47.752 0.260 1.00 42.94 O
ATOM 25 O5' C B 36 -18.035 47.573 -0.716 1.00 41.53 O
TER
Atoms:
OP1: (-22.658,34.143,5.469)
OP2: (-23.220,34.392,2.977)
C3': (-23.726,39.800,3.056)
C1': (-21.371,40.059,3.423)
C5': (-23.572,37.280,3.488)
O6: (-18.827,39.031,-1.932)
O4': (-21.761,38.800,3.937)
C8: (-19.142,39.870,2.245)
C2: (-22.200,39.185,-0.808)
C6: (-19.772,39.170,-1.142)
C5: (-19.719,39.452,0.244)
C4: (-20.895,39.571,0.954)
P: (-22.640,34.943,4.224)
C4': (-23.205,38.679,3.944)
C2': (-22.641,40.868,3.160)
O2': (-22.876,41.757,4.236)
N1: (-21.083,39.050,-1.597)
N2: (-23.382,39.038,-1.421)
N3: (-22.163,39.450,0.491)
N7: (-18.621,39.642,1.072)
N9: (-20.516,39.841,2.254)
O5': (-23.323,36.354,4.536)
O3': (-24.960,40.277,3.577)
OP2: (-23.220,34.392,2.977)
C3': (-23.726,39.800,3.056)
C1': (-21.371,40.059,3.423)
C5': (-23.572,37.280,3.488)
O6: (-18.827,39.031,-1.932)
O4': (-21.761,38.800,3.937)
C8: (-19.142,39.870,2.245)
C2: (-22.200,39.185,-0.808)
C6: (-19.772,39.170,-1.142)
C5: (-19.719,39.452,0.244)
C4: (-20.895,39.571,0.954)
P: (-22.640,34.943,4.224)
C4': (-23.205,38.679,3.944)
C2': (-22.641,40.868,3.160)
O2': (-22.876,41.757,4.236)
N1: (-21.083,39.050,-1.597)
N2: (-23.382,39.038,-1.421)
N3: (-22.163,39.450,0.491)
N7: (-18.621,39.642,1.072)
N9: (-20.516,39.841,2.254)
O5': (-23.323,36.354,4.536)
O3': (-24.960,40.277,3.577)
C2: (-19.293,42.391,-2.165)
OP1: (-23.759,44.055,3.423)
OP2: (-22.737,46.395,3.238)
C4: (-21.505,42.001,-2.776)
O5': (-21.708,44.444,2.056)
C3': (-19.162,45.164,0.955)
C1': (-18.700,42.996,0.174)
O4': (-19.283,42.870,1.457)
C5': (-20.582,44.311,2.912)
P: (-23.058,45.085,2.627)
O2: (-18.087,42.465,-2.430)
C4': (-19.310,44.170,2.099)
C2': (-18.175,44.422,0.068)
O2': (-16.865,44.480,0.593)
N1: (-19.716,42.649,-0.858)
N3: (-20.215,42.070,-3.105)
N4: (-22.376,41.679,-3.739)
C6: (-21.037,42.576,-0.529)
C5: (-21.957,42.261,-1.448)
O3': (-18.600,46.377,1.418)
OP1: (-23.759,44.055,3.423)
OP2: (-22.737,46.395,3.238)
C4: (-21.505,42.001,-2.776)
O5': (-21.708,44.444,2.056)
C3': (-19.162,45.164,0.955)
C1': (-18.700,42.996,0.174)
O4': (-19.283,42.870,1.457)
C5': (-20.582,44.311,2.912)
P: (-23.058,45.085,2.627)
O2: (-18.087,42.465,-2.430)
C4': (-19.310,44.170,2.099)
C2': (-18.175,44.422,0.068)
O2': (-16.865,44.480,0.593)
N1: (-19.716,42.649,-0.858)
N3: (-20.215,42.070,-3.105)
N4: (-22.376,41.679,-3.739)
C6: (-21.037,42.576,-0.529)
C5: (-21.957,42.261,-1.448)
O3': (-18.600,46.377,1.418)
Image (generated by PyMOL):