Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B56:B25
Extra
PDB:
ATOM 1 O3' U A 55 7.158 -21.620 35.222 1.00 36.37 O
ATOM 2 P A A 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 3 OP1 A A 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 4 OP2 A A 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 5 O5' A A 56 7.269 -24.150 35.351 1.00 35.61 O
ATOM 6 C5' A A 56 7.912 -25.447 35.298 1.00 33.45 C
ATOM 7 C4' A A 56 7.015 -26.458 34.611 1.00 32.10 C
ATOM 8 O4' A A 56 5.816 -26.666 35.398 1.00 31.85 O
ATOM 9 C3' A A 56 6.504 -26.062 33.236 1.00 31.04 C
ATOM 10 O3' A A 56 7.449 -26.382 32.225 1.00 30.49 O
ATOM 11 C2' A A 56 5.210 -26.857 33.102 1.00 30.64 C
ATOM 12 O2' A A 56 5.417 -28.188 32.689 1.00 30.16 O
ATOM 13 C1' A A 56 4.709 -26.884 34.543 1.00 30.57 C
ATOM 14 N9 A A 56 3.691 -25.887 34.859 1.00 30.27 N
ATOM 15 C8 A A 56 3.831 -24.772 35.646 1.00 29.96 C
ATOM 16 N7 A A 56 2.718 -24.102 35.817 1.00 30.24 N
ATOM 17 C5 A A 56 1.784 -24.815 35.080 1.00 29.76 C
ATOM 18 C6 A A 56 0.407 -24.630 34.869 1.00 30.18 C
ATOM 19 N6 A A 56 -0.298 -23.632 35.415 1.00 30.75 N
ATOM 20 N1 A A 56 -0.230 -25.513 34.071 1.00 29.93 N
ATOM 21 C2 A A 56 0.478 -26.511 33.528 1.00 29.78 C
ATOM 22 N3 A A 56 1.772 -26.796 33.658 1.00 30.03 N
ATOM 23 C4 A A 56 2.374 -25.902 34.461 1.00 30.08 C
ATOM 24 P A A 57 7.541 -25.460 30.915 1.00 30.25 P
ATOM 25 OP1 A A 57 8.525 -26.039 29.956 1.00 30.17 O
ATOM 26 OP2 A A 57 7.698 -24.057 31.372 1.00 31.06 O
ATOM 27 O5' A A 57 6.092 -25.615 30.276 1.00 29.79 O
TER
ATOM 1 O3' G B 24 -4.973 -23.174 39.937 1.00 33.52 O
ATOM 2 P C B 25 -5.336 -21.698 39.398 1.00 33.32 P
ATOM 3 OP1 C B 25 -4.804 -20.702 40.363 1.00 33.83 O
ATOM 4 OP2 C B 25 -6.783 -21.670 39.040 1.00 33.46 O
ATOM 5 O5' C B 25 -4.478 -21.578 38.064 1.00 32.28 O
ATOM 6 C5' C B 25 -3.046 -21.559 38.127 1.00 31.94 C
ATOM 7 C4' C B 25 -2.475 -21.050 36.831 1.00 32.29 C
ATOM 8 O4' C B 25 -2.653 -22.043 35.789 1.00 32.40 O
ATOM 9 C3' C B 25 -3.123 -19.791 36.277 1.00 32.05 C
ATOM 10 O3' C B 25 -2.599 -18.614 36.873 1.00 32.02 O
ATOM 11 C2' C B 25 -2.801 -19.889 34.793 1.00 32.16 C
ATOM 12 O2' C B 25 -1.478 -19.491 34.516 1.00 32.74 O
ATOM 13 C1' C B 25 -2.910 -21.396 34.553 1.00 32.18 C
ATOM 14 N1 C B 25 -4.265 -21.771 34.100 1.00 31.54 N
ATOM 15 C2 C B 25 -4.588 -21.655 32.739 1.00 31.03 C
ATOM 16 O2 C B 25 -3.708 -21.296 31.933 1.00 32.16 O
ATOM 17 N3 C B 25 -5.845 -21.945 32.336 1.00 29.89 N
ATOM 18 C4 C B 25 -6.752 -22.358 33.221 1.00 28.92 C
ATOM 19 N4 C B 25 -7.979 -22.632 32.778 1.00 28.86 N
ATOM 20 C5 C B 25 -6.444 -22.511 34.598 1.00 29.56 C
ATOM 21 C6 C B 25 -5.202 -22.210 34.992 1.00 29.98 C
ATOM 22 P U B 26 -3.545 -17.325 37.041 1.00 31.34 P
ATOM 23 OP1 U B 26 -2.815 -16.304 37.835 1.00 33.23 O
ATOM 24 OP2 U B 26 -4.866 -17.812 37.510 1.00 32.35 O
ATOM 25 O5' U B 26 -3.705 -16.766 35.559 1.00 31.60 O
TER
ATOM 2 P A A 56 8.092 -22.834 35.724 1.00 36.54 P
ATOM 3 OP1 A A 56 8.170 -22.732 37.201 1.00 37.32 O
ATOM 4 OP2 A A 56 9.348 -22.840 34.914 1.00 35.84 O
ATOM 5 O5' A A 56 7.269 -24.150 35.351 1.00 35.61 O
ATOM 6 C5' A A 56 7.912 -25.447 35.298 1.00 33.45 C
ATOM 7 C4' A A 56 7.015 -26.458 34.611 1.00 32.10 C
ATOM 8 O4' A A 56 5.816 -26.666 35.398 1.00 31.85 O
ATOM 9 C3' A A 56 6.504 -26.062 33.236 1.00 31.04 C
ATOM 10 O3' A A 56 7.449 -26.382 32.225 1.00 30.49 O
ATOM 11 C2' A A 56 5.210 -26.857 33.102 1.00 30.64 C
ATOM 12 O2' A A 56 5.417 -28.188 32.689 1.00 30.16 O
ATOM 13 C1' A A 56 4.709 -26.884 34.543 1.00 30.57 C
ATOM 14 N9 A A 56 3.691 -25.887 34.859 1.00 30.27 N
ATOM 15 C8 A A 56 3.831 -24.772 35.646 1.00 29.96 C
ATOM 16 N7 A A 56 2.718 -24.102 35.817 1.00 30.24 N
ATOM 17 C5 A A 56 1.784 -24.815 35.080 1.00 29.76 C
ATOM 18 C6 A A 56 0.407 -24.630 34.869 1.00 30.18 C
ATOM 19 N6 A A 56 -0.298 -23.632 35.415 1.00 30.75 N
ATOM 20 N1 A A 56 -0.230 -25.513 34.071 1.00 29.93 N
ATOM 21 C2 A A 56 0.478 -26.511 33.528 1.00 29.78 C
ATOM 22 N3 A A 56 1.772 -26.796 33.658 1.00 30.03 N
ATOM 23 C4 A A 56 2.374 -25.902 34.461 1.00 30.08 C
ATOM 24 P A A 57 7.541 -25.460 30.915 1.00 30.25 P
ATOM 25 OP1 A A 57 8.525 -26.039 29.956 1.00 30.17 O
ATOM 26 OP2 A A 57 7.698 -24.057 31.372 1.00 31.06 O
ATOM 27 O5' A A 57 6.092 -25.615 30.276 1.00 29.79 O
TER
ATOM 1 O3' G B 24 -4.973 -23.174 39.937 1.00 33.52 O
ATOM 2 P C B 25 -5.336 -21.698 39.398 1.00 33.32 P
ATOM 3 OP1 C B 25 -4.804 -20.702 40.363 1.00 33.83 O
ATOM 4 OP2 C B 25 -6.783 -21.670 39.040 1.00 33.46 O
ATOM 5 O5' C B 25 -4.478 -21.578 38.064 1.00 32.28 O
ATOM 6 C5' C B 25 -3.046 -21.559 38.127 1.00 31.94 C
ATOM 7 C4' C B 25 -2.475 -21.050 36.831 1.00 32.29 C
ATOM 8 O4' C B 25 -2.653 -22.043 35.789 1.00 32.40 O
ATOM 9 C3' C B 25 -3.123 -19.791 36.277 1.00 32.05 C
ATOM 10 O3' C B 25 -2.599 -18.614 36.873 1.00 32.02 O
ATOM 11 C2' C B 25 -2.801 -19.889 34.793 1.00 32.16 C
ATOM 12 O2' C B 25 -1.478 -19.491 34.516 1.00 32.74 O
ATOM 13 C1' C B 25 -2.910 -21.396 34.553 1.00 32.18 C
ATOM 14 N1 C B 25 -4.265 -21.771 34.100 1.00 31.54 N
ATOM 15 C2 C B 25 -4.588 -21.655 32.739 1.00 31.03 C
ATOM 16 O2 C B 25 -3.708 -21.296 31.933 1.00 32.16 O
ATOM 17 N3 C B 25 -5.845 -21.945 32.336 1.00 29.89 N
ATOM 18 C4 C B 25 -6.752 -22.358 33.221 1.00 28.92 C
ATOM 19 N4 C B 25 -7.979 -22.632 32.778 1.00 28.86 N
ATOM 20 C5 C B 25 -6.444 -22.511 34.598 1.00 29.56 C
ATOM 21 C6 C B 25 -5.202 -22.210 34.992 1.00 29.98 C
ATOM 22 P U B 26 -3.545 -17.325 37.041 1.00 31.34 P
ATOM 23 OP1 U B 26 -2.815 -16.304 37.835 1.00 33.23 O
ATOM 24 OP2 U B 26 -4.866 -17.812 37.510 1.00 32.35 O
ATOM 25 O5' U B 26 -3.705 -16.766 35.559 1.00 31.60 O
TER
Atoms:
OP1: (8.170,-22.732,37.201)
OP2: (9.348,-22.840,34.914)
C3': (6.504,-26.062,33.236)
C1': (4.709,-26.884,34.543)
C5': (7.912,-25.447,35.298)
O4': (5.816,-26.666,35.398)
C8: (3.831,-24.772,35.646)
O2': (5.417,-28.188,32.689)
C6: (0.407,-24.630,34.869)
C5: (1.784,-24.815,35.080)
C4: (2.374,-25.902,34.461)
P: (8.092,-22.834,35.724)
C4': (7.015,-26.458,34.611)
C2': (5.210,-26.857,33.102)
C2: (0.478,-26.511,33.528)
N1: (-0.230,-25.513,34.071)
N3: (1.772,-26.796,33.658)
N6: (-0.298,-23.632,35.415)
N7: (2.718,-24.102,35.817)
N9: (3.691,-25.887,34.859)
O5': (7.269,-24.150,35.351)
O3': (7.449,-26.382,32.225)
OP2: (9.348,-22.840,34.914)
C3': (6.504,-26.062,33.236)
C1': (4.709,-26.884,34.543)
C5': (7.912,-25.447,35.298)
O4': (5.816,-26.666,35.398)
C8: (3.831,-24.772,35.646)
O2': (5.417,-28.188,32.689)
C6: (0.407,-24.630,34.869)
C5: (1.784,-24.815,35.080)
C4: (2.374,-25.902,34.461)
P: (8.092,-22.834,35.724)
C4': (7.015,-26.458,34.611)
C2': (5.210,-26.857,33.102)
C2: (0.478,-26.511,33.528)
N1: (-0.230,-25.513,34.071)
N3: (1.772,-26.796,33.658)
N6: (-0.298,-23.632,35.415)
N7: (2.718,-24.102,35.817)
N9: (3.691,-25.887,34.859)
O5': (7.269,-24.150,35.351)
O3': (7.449,-26.382,32.225)
C2: (-4.588,-21.655,32.739)
OP1: (-4.804,-20.702,40.363)
OP2: (-6.783,-21.670,39.040)
C4: (-6.752,-22.358,33.221)
O5': (-4.478,-21.578,38.064)
C3': (-3.123,-19.791,36.277)
C1': (-2.910,-21.396,34.553)
O4': (-2.653,-22.043,35.789)
C5': (-3.046,-21.559,38.127)
P: (-5.336,-21.698,39.398)
O2: (-3.708,-21.296,31.933)
C4': (-2.475,-21.050,36.831)
C2': (-2.801,-19.889,34.793)
O2': (-1.478,-19.491,34.516)
N1: (-4.265,-21.771,34.100)
N3: (-5.845,-21.945,32.336)
N4: (-7.979,-22.632,32.778)
C6: (-5.202,-22.210,34.992)
C5: (-6.444,-22.511,34.598)
O3': (-2.599,-18.614,36.873)
OP1: (-4.804,-20.702,40.363)
OP2: (-6.783,-21.670,39.040)
C4: (-6.752,-22.358,33.221)
O5': (-4.478,-21.578,38.064)
C3': (-3.123,-19.791,36.277)
C1': (-2.910,-21.396,34.553)
O4': (-2.653,-22.043,35.789)
C5': (-3.046,-21.559,38.127)
P: (-5.336,-21.698,39.398)
O2: (-3.708,-21.296,31.933)
C4': (-2.475,-21.050,36.831)
C2': (-2.801,-19.889,34.793)
O2': (-1.478,-19.491,34.516)
N1: (-4.265,-21.771,34.100)
N3: (-5.845,-21.945,32.336)
N4: (-7.979,-22.632,32.778)
C6: (-5.202,-22.210,34.992)
C5: (-6.444,-22.511,34.598)
O3': (-2.599,-18.614,36.873)
Image (generated by PyMOL):