Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0261:0259
Extra
PDB:
ATOM 1 O3' A A 260 74.285 94.635 2.690 1.00 97.39 O
ATOM 2 P G A 261 75.731 94.439 3.388 1.00 94.96 P
ATOM 3 OP1 G A 261 76.123 93.006 3.233 1.00 94.51 O
ATOM 4 OP2 G A 261 75.704 95.038 4.744 1.00 94.70 O
ATOM 5 O5' G A 261 76.741 95.295 2.506 1.00 91.41 O
ATOM 6 C5' G A 261 78.153 95.189 2.736 1.00 85.11 C
ATOM 7 C4' G A 261 78.708 96.524 3.136 1.00 80.68 C
ATOM 8 O4' G A 261 79.733 96.339 4.138 1.00 79.29 O
ATOM 9 C3' G A 261 79.397 97.323 2.050 1.00 80.21 C
ATOM 10 O3' G A 261 78.469 97.998 1.207 1.00 79.51 O
ATOM 11 C2' G A 261 80.261 98.271 2.874 1.00 79.49 C
ATOM 12 O2' G A 261 79.517 99.330 3.446 1.00 81.54 O
ATOM 13 C1' G A 261 80.715 97.348 4.005 1.00 76.86 C
ATOM 14 N9 G A 261 82.005 96.710 3.770 1.00 73.73 N
ATOM 15 C8 G A 261 82.253 95.376 3.545 1.00 72.02 C
ATOM 16 N7 G A 261 83.519 95.111 3.379 1.00 71.11 N
ATOM 17 C5 G A 261 84.145 96.345 3.495 1.00 72.15 C
ATOM 18 C6 G A 261 85.518 96.696 3.401 1.00 71.54 C
ATOM 19 O6 G A 261 86.488 95.965 3.179 1.00 70.79 O
ATOM 20 N1 G A 261 85.711 98.059 3.591 1.00 71.14 N
ATOM 21 C2 G A 261 84.715 98.971 3.832 1.00 71.63 C
ATOM 22 N2 G A 261 85.104 100.241 3.993 1.00 71.07 N
ATOM 23 N3 G A 261 83.433 98.661 3.912 1.00 72.46 N
ATOM 24 C4 G A 261 83.222 97.340 3.738 1.00 73.02 C
ATOM 25 P G A 262 78.816 98.209 -0.352 1.00 78.85 P
ATOM 26 OP1 G A 262 77.611 98.823 -0.966 1.00 78.57 O
ATOM 27 OP2 G A 262 79.359 96.937 -0.906 1.00 78.15 O
ATOM 28 O5' G A 262 79.986 99.294 -0.355 1.00 76.87 O
TER
ATOM 1 O3' U B 258 78.323 102.925 6.412 1.00 76.57 O
ATOM 2 P C B 259 76.989 102.415 7.155 1.00 79.79 P
ATOM 3 OP1 C B 259 75.872 103.391 6.986 1.00 78.40 O
ATOM 4 OP2 C B 259 77.421 102.013 8.522 1.00 80.10 O
ATOM 5 O5' C B 259 76.588 101.097 6.363 1.00 81.80 O
ATOM 6 C5' C B 259 77.545 100.052 6.154 1.00 84.90 C
ATOM 7 C4' C B 259 76.862 98.711 6.192 1.00 87.29 C
ATOM 8 O4' C B 259 77.833 97.691 5.857 1.00 87.51 O
ATOM 9 C3' C B 259 76.280 98.318 7.544 1.00 89.28 C
ATOM 10 O3' C B 259 75.152 97.471 7.344 1.00 92.94 O
ATOM 11 C2' C B 259 77.421 97.525 8.167 1.00 88.82 C
ATOM 12 O2' C B 259 76.961 96.595 9.125 1.00 90.18 O
ATOM 13 C1' C B 259 77.996 96.810 6.945 1.00 87.54 C
ATOM 14 N1 C B 259 79.429 96.482 7.031 1.00 87.64 N
ATOM 15 C2 C B 259 79.845 95.175 6.722 1.00 88.51 C
ATOM 16 O2 C B 259 78.997 94.331 6.382 1.00 88.96 O
ATOM 17 N3 C B 259 81.162 94.869 6.792 1.00 88.94 N
ATOM 18 C4 C B 259 82.048 95.803 7.147 1.00 88.90 C
ATOM 19 N4 C B 259 83.330 95.452 7.199 1.00 88.44 N
ATOM 20 C5 C B 259 81.655 97.138 7.464 1.00 88.78 C
ATOM 21 C6 C B 259 80.348 97.430 7.397 1.00 88.03 C
ATOM 22 P A B 260 73.664 98.094 7.315 1.00 95.44 P
ATOM 23 OP1 A B 260 73.720 99.536 6.952 1.00 95.13 O
ATOM 24 OP2 A B 260 72.973 97.678 8.563 1.00 96.53 O
ATOM 25 O5' A B 260 72.982 97.313 6.111 1.00 96.49 O
TER
ATOM 2 P G A 261 75.731 94.439 3.388 1.00 94.96 P
ATOM 3 OP1 G A 261 76.123 93.006 3.233 1.00 94.51 O
ATOM 4 OP2 G A 261 75.704 95.038 4.744 1.00 94.70 O
ATOM 5 O5' G A 261 76.741 95.295 2.506 1.00 91.41 O
ATOM 6 C5' G A 261 78.153 95.189 2.736 1.00 85.11 C
ATOM 7 C4' G A 261 78.708 96.524 3.136 1.00 80.68 C
ATOM 8 O4' G A 261 79.733 96.339 4.138 1.00 79.29 O
ATOM 9 C3' G A 261 79.397 97.323 2.050 1.00 80.21 C
ATOM 10 O3' G A 261 78.469 97.998 1.207 1.00 79.51 O
ATOM 11 C2' G A 261 80.261 98.271 2.874 1.00 79.49 C
ATOM 12 O2' G A 261 79.517 99.330 3.446 1.00 81.54 O
ATOM 13 C1' G A 261 80.715 97.348 4.005 1.00 76.86 C
ATOM 14 N9 G A 261 82.005 96.710 3.770 1.00 73.73 N
ATOM 15 C8 G A 261 82.253 95.376 3.545 1.00 72.02 C
ATOM 16 N7 G A 261 83.519 95.111 3.379 1.00 71.11 N
ATOM 17 C5 G A 261 84.145 96.345 3.495 1.00 72.15 C
ATOM 18 C6 G A 261 85.518 96.696 3.401 1.00 71.54 C
ATOM 19 O6 G A 261 86.488 95.965 3.179 1.00 70.79 O
ATOM 20 N1 G A 261 85.711 98.059 3.591 1.00 71.14 N
ATOM 21 C2 G A 261 84.715 98.971 3.832 1.00 71.63 C
ATOM 22 N2 G A 261 85.104 100.241 3.993 1.00 71.07 N
ATOM 23 N3 G A 261 83.433 98.661 3.912 1.00 72.46 N
ATOM 24 C4 G A 261 83.222 97.340 3.738 1.00 73.02 C
ATOM 25 P G A 262 78.816 98.209 -0.352 1.00 78.85 P
ATOM 26 OP1 G A 262 77.611 98.823 -0.966 1.00 78.57 O
ATOM 27 OP2 G A 262 79.359 96.937 -0.906 1.00 78.15 O
ATOM 28 O5' G A 262 79.986 99.294 -0.355 1.00 76.87 O
TER
ATOM 1 O3' U B 258 78.323 102.925 6.412 1.00 76.57 O
ATOM 2 P C B 259 76.989 102.415 7.155 1.00 79.79 P
ATOM 3 OP1 C B 259 75.872 103.391 6.986 1.00 78.40 O
ATOM 4 OP2 C B 259 77.421 102.013 8.522 1.00 80.10 O
ATOM 5 O5' C B 259 76.588 101.097 6.363 1.00 81.80 O
ATOM 6 C5' C B 259 77.545 100.052 6.154 1.00 84.90 C
ATOM 7 C4' C B 259 76.862 98.711 6.192 1.00 87.29 C
ATOM 8 O4' C B 259 77.833 97.691 5.857 1.00 87.51 O
ATOM 9 C3' C B 259 76.280 98.318 7.544 1.00 89.28 C
ATOM 10 O3' C B 259 75.152 97.471 7.344 1.00 92.94 O
ATOM 11 C2' C B 259 77.421 97.525 8.167 1.00 88.82 C
ATOM 12 O2' C B 259 76.961 96.595 9.125 1.00 90.18 O
ATOM 13 C1' C B 259 77.996 96.810 6.945 1.00 87.54 C
ATOM 14 N1 C B 259 79.429 96.482 7.031 1.00 87.64 N
ATOM 15 C2 C B 259 79.845 95.175 6.722 1.00 88.51 C
ATOM 16 O2 C B 259 78.997 94.331 6.382 1.00 88.96 O
ATOM 17 N3 C B 259 81.162 94.869 6.792 1.00 88.94 N
ATOM 18 C4 C B 259 82.048 95.803 7.147 1.00 88.90 C
ATOM 19 N4 C B 259 83.330 95.452 7.199 1.00 88.44 N
ATOM 20 C5 C B 259 81.655 97.138 7.464 1.00 88.78 C
ATOM 21 C6 C B 259 80.348 97.430 7.397 1.00 88.03 C
ATOM 22 P A B 260 73.664 98.094 7.315 1.00 95.44 P
ATOM 23 OP1 A B 260 73.720 99.536 6.952 1.00 95.13 O
ATOM 24 OP2 A B 260 72.973 97.678 8.563 1.00 96.53 O
ATOM 25 O5' A B 260 72.982 97.313 6.111 1.00 96.49 O
TER
Atoms:
OP1: (76.123,93.006,3.233)
OP2: (75.704,95.038,4.744)
C3': (79.397,97.323,2.050)
C1': (80.715,97.348,4.005)
C5': (78.153,95.189,2.736)
O6: (86.488,95.965,3.179)
O4': (79.733,96.339,4.138)
C8: (82.253,95.376,3.545)
C2: (84.715,98.971,3.832)
C6: (85.518,96.696,3.401)
C5: (84.145,96.345,3.495)
C4: (83.222,97.340,3.738)
P: (75.731,94.439,3.388)
C4': (78.708,96.524,3.136)
C2': (80.261,98.271,2.874)
O2': (79.517,99.330,3.446)
N1: (85.711,98.059,3.591)
N2: (85.104,100.241,3.993)
N3: (83.433,98.661,3.912)
N7: (83.519,95.111,3.379)
N9: (82.005,96.710,3.770)
O5': (76.741,95.295,2.506)
O3': (78.469,97.998,1.207)
OP2: (75.704,95.038,4.744)
C3': (79.397,97.323,2.050)
C1': (80.715,97.348,4.005)
C5': (78.153,95.189,2.736)
O6: (86.488,95.965,3.179)
O4': (79.733,96.339,4.138)
C8: (82.253,95.376,3.545)
C2: (84.715,98.971,3.832)
C6: (85.518,96.696,3.401)
C5: (84.145,96.345,3.495)
C4: (83.222,97.340,3.738)
P: (75.731,94.439,3.388)
C4': (78.708,96.524,3.136)
C2': (80.261,98.271,2.874)
O2': (79.517,99.330,3.446)
N1: (85.711,98.059,3.591)
N2: (85.104,100.241,3.993)
N3: (83.433,98.661,3.912)
N7: (83.519,95.111,3.379)
N9: (82.005,96.710,3.770)
O5': (76.741,95.295,2.506)
O3': (78.469,97.998,1.207)
C2: (79.845,95.175,6.722)
OP1: (75.872,103.391,6.986)
OP2: (77.421,102.013,8.522)
C4: (82.048,95.803,7.147)
O5': (76.588,101.097,6.363)
C3': (76.280,98.318,7.544)
C1': (77.996,96.810,6.945)
O4': (77.833,97.691,5.857)
C5': (77.545,100.052,6.154)
P: (76.989,102.415,7.155)
O2: (78.997,94.331,6.382)
C4': (76.862,98.711,6.192)
C2': (77.421,97.525,8.167)
O2': (76.961,96.595,9.125)
N1: (79.429,96.482,7.031)
N3: (81.162,94.869,6.792)
N4: (83.330,95.452,7.199)
C6: (80.348,97.430,7.397)
C5: (81.655,97.138,7.464)
O3': (75.152,97.471,7.344)
OP1: (75.872,103.391,6.986)
OP2: (77.421,102.013,8.522)
C4: (82.048,95.803,7.147)
O5': (76.588,101.097,6.363)
C3': (76.280,98.318,7.544)
C1': (77.996,96.810,6.945)
O4': (77.833,97.691,5.857)
C5': (77.545,100.052,6.154)
P: (76.989,102.415,7.155)
O2: (78.997,94.331,6.382)
C4': (76.862,98.711,6.192)
C2': (77.421,97.525,8.167)
O2': (76.961,96.595,9.125)
N1: (79.429,96.482,7.031)
N3: (81.162,94.869,6.792)
N4: (83.330,95.452,7.199)
C6: (80.348,97.430,7.397)
C5: (81.655,97.138,7.464)
O3': (75.152,97.471,7.344)
Image (generated by PyMOL):