ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1EXD:B43:B7

Extra

PDB:
ATOM 1 O3' G A 42 16.428 19.015 38.857 1.00 69.32 O
ATOM 2 P G A 43 15.632 20.383 39.058 1.00 69.48 P
ATOM 3 OP1 G A 43 15.782 20.834 40.465 1.00 70.41 O
ATOM 4 OP2 G A 43 14.274 20.217 38.465 1.00 60.13 O
ATOM 5 O5' G A 43 16.419 21.387 38.116 1.00 70.20 O
ATOM 6 C5' G A 43 17.834 21.584 38.255 1.00 56.12 C
ATOM 7 C4' G A 43 18.284 22.591 37.243 1.00 52.14 C
ATOM 8 O4' G A 43 18.105 22.040 35.912 1.00 49.58 O
ATOM 9 C3' G A 43 17.404 23.820 37.212 1.00 52.74 C
ATOM 10 O3' G A 43 17.742 24.721 38.248 1.00 60.00 O
ATOM 11 C2' G A 43 17.675 24.372 35.824 1.00 51.82 C
ATOM 12 O2' G A 43 18.864 25.125 35.783 1.00 53.11 O
ATOM 13 C1' G A 43 17.805 23.084 35.005 1.00 55.50 C
ATOM 14 N9 G A 43 16.564 22.752 34.314 1.00 64.29 N
ATOM 15 C8 G A 43 15.336 22.556 34.889 1.00 68.93 C
ATOM 16 N7 G A 43 14.391 22.325 34.018 1.00 71.08 N
ATOM 17 C5 G A 43 15.035 22.357 32.791 1.00 71.49 C
ATOM 18 C6 G A 43 14.520 22.179 31.482 1.00 73.49 C
ATOM 19 O6 G A 43 13.346 21.966 31.129 1.00 73.75 O
ATOM 20 N1 G A 43 15.522 22.276 30.524 1.00 74.25 N
ATOM 21 C2 G A 43 16.846 22.520 30.786 1.00 73.81 C
ATOM 22 N2 G A 43 17.657 22.563 29.718 1.00 77.81 N
ATOM 23 N3 G A 43 17.340 22.703 32.001 1.00 73.80 N
ATOM 24 C4 G A 43 16.382 22.607 32.952 1.00 70.60 C
ATOM 25 P U A 44 16.676 25.828 38.705 1.00 64.77 P
ATOM 26 OP1 U A 44 17.179 26.539 39.916 1.00 63.70 O
ATOM 27 OP2 U A 44 15.335 25.180 38.725 1.00 63.98 O
ATOM 28 O5' U A 44 16.673 26.846 37.486 1.00 67.17 O
TER

ATOM 1 O3' U B 6 20.935 25.461 34.076 1.00 53.34 O
ATOM 2 P C B 7 22.082 24.344 34.196 1.00 55.00 P
ATOM 3 OP1 C B 7 23.239 24.876 34.957 1.00 56.97 O
ATOM 4 OP2 C B 7 22.277 23.781 32.830 1.00 62.43 O
ATOM 5 O5' C B 7 21.446 23.199 35.075 1.00 54.77 O
ATOM 6 C5' C B 7 22.019 21.899 35.068 1.00 55.67 C
ATOM 7 C4' C B 7 20.940 20.871 35.247 1.00 55.79 C
ATOM 8 O4' C B 7 20.039 20.811 34.134 1.00 56.33 O
ATOM 9 C3' C B 7 21.418 19.452 35.425 1.00 51.55 C
ATOM 10 O3' C B 7 21.614 19.475 36.827 1.00 51.78 O
ATOM 11 C2' C B 7 20.224 18.592 34.962 1.00 51.48 C
ATOM 12 O2' C B 7 19.468 18.041 36.008 1.00 62.90 O
ATOM 13 C1' C B 7 19.326 19.613 34.252 1.00 53.82 C
ATOM 14 N1 C B 7 18.708 19.291 32.968 1.00 57.54 N
ATOM 15 C2 C B 7 17.312 19.150 32.924 1.00 58.32 C
ATOM 16 O2 C B 7 16.663 19.259 33.975 1.00 60.24 O
ATOM 17 N3 C B 7 16.709 18.904 31.742 1.00 55.76 N
ATOM 18 C4 C B 7 17.441 18.775 30.638 1.00 61.53 C
ATOM 19 N4 C B 7 16.805 18.518 29.494 1.00 67.18 N
ATOM 20 C5 C B 7 18.864 18.899 30.658 1.00 65.36 C
ATOM 21 C6 C B 7 19.451 19.152 31.835 1.00 60.91 C
ATOM 22 P G B 8 22.413 18.318 37.564 1.00 64.66 P
ATOM 23 OP1 G B 8 21.613 17.067 37.622 1.00 70.83 O
ATOM 24 OP2 G B 8 22.884 18.949 38.825 1.00 69.60 O
ATOM 25 O5' G B 8 23.688 18.053 36.669 1.00 59.98 O
TER

Atoms:
OP1: (15.782,20.834,40.465)
OP2: (14.274,20.217,38.465)
C3': (17.404,23.820,37.212)
C1': (17.805,23.084,35.005)
C5': (17.834,21.584,38.255)
O6: (13.346,21.966,31.129)
O4': (18.105,22.040,35.912)
C8: (15.336,22.556,34.889)
C2: (16.846,22.520,30.786)
C6: (14.520,22.179,31.482)
C5: (15.035,22.357,32.791)
C4: (16.382,22.607,32.952)
P: (15.632,20.383,39.058)
C4': (18.284,22.591,37.243)
C2': (17.675,24.372,35.824)
O2': (18.864,25.125,35.783)
N1: (15.522,22.276,30.524)
N2: (17.657,22.563,29.718)
N3: (17.340,22.703,32.001)
N7: (14.391,22.325,34.018)
N9: (16.564,22.752,34.314)
O5': (16.419,21.387,38.116)
O3': (17.742,24.721,38.248)
C2: (17.312,19.150,32.924)
OP1: (23.239,24.876,34.957)
OP2: (22.277,23.781,32.830)
C4: (17.441,18.775,30.638)
O5': (21.446,23.199,35.075)
C3': (21.418,19.452,35.425)
C1': (19.326,19.613,34.252)
O4': (20.039,20.811,34.134)
C5': (22.019,21.899,35.068)
P: (22.082,24.344,34.196)
O2: (16.663,19.259,33.975)
C4': (20.940,20.871,35.247)
C2': (20.224,18.592,34.962)
O2': (19.468,18.041,36.008)
N1: (18.708,19.291,32.968)
N3: (16.709,18.904,31.742)
N4: (16.805,18.518,29.494)
C6: (19.451,19.152,31.835)
C5: (18.864,18.899,30.658)
O3': (21.614,19.475,36.827)
Image (generated by PyMOL):
PyMOL image
show in jmol