Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1553:A1551
Extra
PDB:
ATOM 1 O3' U A1552 -17.776 -14.051 20.371 1.00 26.18 O
ATOM 2 P G A1553 -18.527 -13.031 19.409 1.00 9.18 P
ATOM 3 OP1 G A1553 -19.214 -12.032 20.278 1.00 9.18 O
ATOM 4 OP2 G A1553 -19.341 -13.850 18.459 1.00 9.18 O
ATOM 5 O5' G A1553 -17.332 -12.329 18.636 1.00 9.18 O
ATOM 6 C5' G A1553 -16.023 -12.331 19.169 1.00 9.18 C
ATOM 7 C4' G A1553 -15.037 -11.869 18.143 1.00 9.18 C
ATOM 8 O4' G A1553 -14.721 -12.964 17.243 1.00 9.18 O
ATOM 9 C3' G A1553 -15.520 -10.755 17.235 1.00 9.18 C
ATOM 10 O3' G A1553 -15.357 -9.477 17.820 1.00 9.18 O
ATOM 11 C2' G A1553 -14.675 -10.957 15.988 1.00 9.18 C
ATOM 12 O2' G A1553 -13.373 -10.414 16.175 1.00 9.18 O
ATOM 13 C1' G A1553 -14.563 -12.480 15.928 1.00 9.18 C
ATOM 14 N9 G A1553 -15.612 -13.071 15.081 1.00 8.70 N
ATOM 15 C8 G A1553 -16.551 -13.992 15.471 1.00 8.70 C
ATOM 16 N7 G A1553 -17.384 -14.332 14.528 1.00 8.70 N
ATOM 17 C5 G A1553 -16.966 -13.585 13.452 1.00 8.70 C
ATOM 18 C6 G A1553 -17.500 -13.540 12.155 1.00 8.70 C
ATOM 19 O6 G A1553 -18.465 -14.184 11.737 1.00 8.70 O
ATOM 20 N1 G A1553 -16.785 -12.657 11.348 1.00 8.70 N
ATOM 21 C2 G A1553 -15.701 -11.919 11.756 1.00 8.70 C
ATOM 22 N2 G A1553 -15.144 -11.114 10.844 1.00 8.70 N
ATOM 23 N3 G A1553 -15.195 -11.956 12.978 1.00 8.70 N
ATOM 24 C4 G A1553 -15.872 -12.808 13.766 1.00 8.70 C
ATOM 25 P C A1554 -16.465 -8.323 17.634 1.00 0.01 P
ATOM 26 OP1 C A1554 -15.909 -7.109 18.258 1.00 0.01 O
ATOM 27 OP2 C A1554 -17.754 -8.862 18.155 1.00 0.01 O
ATOM 28 O5' C A1554 -16.552 -8.129 16.053 1.00 0.01 O
TER
ATOM 1 O3' C B1550 -9.519 -16.209 16.338 1.00 4.20 O
ATOM 2 P C B1551 -10.803 -15.509 16.965 1.00 3.21 P
ATOM 3 OP1 C B1551 -11.069 -14.284 16.166 1.00 3.21 O
ATOM 4 OP2 C B1551 -10.555 -15.379 18.421 1.00 3.21 O
ATOM 5 O5' C B1551 -11.946 -16.585 16.699 1.00 3.21 O
ATOM 6 C5' C B1551 -13.048 -16.709 17.580 1.00 3.21 C
ATOM 7 C4' C B1551 -14.336 -16.903 16.833 1.00 3.21 C
ATOM 8 O4' C B1551 -14.450 -15.885 15.803 1.00 3.21 O
ATOM 9 C3' C B1551 -14.485 -18.251 16.141 1.00 3.21 C
ATOM 10 O3' C B1551 -15.804 -18.749 16.344 1.00 3.21 O
ATOM 11 C2' C B1551 -14.263 -17.923 14.659 1.00 3.21 C
ATOM 12 O2' C B1551 -14.959 -18.750 13.754 1.00 3.21 O
ATOM 13 C1' C B1551 -14.734 -16.479 14.557 1.00 3.21 C
ATOM 14 N1 C B1551 -14.028 -15.719 13.514 1.00 3.53 N
ATOM 15 C2 C B1551 -14.554 -15.595 12.235 1.00 3.53 C
ATOM 16 O2 C B1551 -15.644 -16.096 11.994 1.00 3.53 O
ATOM 17 N3 C B1551 -13.873 -14.933 11.282 1.00 3.53 N
ATOM 18 C4 C B1551 -12.668 -14.426 11.556 1.00 3.53 C
ATOM 19 N4 C B1551 -11.990 -13.767 10.593 1.00 3.53 N
ATOM 20 C5 C B1551 -12.088 -14.567 12.851 1.00 3.53 C
ATOM 21 C6 C B1551 -12.793 -15.213 13.780 1.00 3.53 C
ATOM 22 P U B1552 -16.301 -19.155 17.819 1.00 26.18 P
ATOM 23 OP1 U B1552 -15.158 -19.803 18.496 1.00 26.18 O
ATOM 24 OP2 U B1552 -17.557 -19.915 17.657 1.00 26.18 O
ATOM 25 O5' U B1552 -16.612 -17.756 18.500 1.00 26.18 O
TER
ATOM 2 P G A1553 -18.527 -13.031 19.409 1.00 9.18 P
ATOM 3 OP1 G A1553 -19.214 -12.032 20.278 1.00 9.18 O
ATOM 4 OP2 G A1553 -19.341 -13.850 18.459 1.00 9.18 O
ATOM 5 O5' G A1553 -17.332 -12.329 18.636 1.00 9.18 O
ATOM 6 C5' G A1553 -16.023 -12.331 19.169 1.00 9.18 C
ATOM 7 C4' G A1553 -15.037 -11.869 18.143 1.00 9.18 C
ATOM 8 O4' G A1553 -14.721 -12.964 17.243 1.00 9.18 O
ATOM 9 C3' G A1553 -15.520 -10.755 17.235 1.00 9.18 C
ATOM 10 O3' G A1553 -15.357 -9.477 17.820 1.00 9.18 O
ATOM 11 C2' G A1553 -14.675 -10.957 15.988 1.00 9.18 C
ATOM 12 O2' G A1553 -13.373 -10.414 16.175 1.00 9.18 O
ATOM 13 C1' G A1553 -14.563 -12.480 15.928 1.00 9.18 C
ATOM 14 N9 G A1553 -15.612 -13.071 15.081 1.00 8.70 N
ATOM 15 C8 G A1553 -16.551 -13.992 15.471 1.00 8.70 C
ATOM 16 N7 G A1553 -17.384 -14.332 14.528 1.00 8.70 N
ATOM 17 C5 G A1553 -16.966 -13.585 13.452 1.00 8.70 C
ATOM 18 C6 G A1553 -17.500 -13.540 12.155 1.00 8.70 C
ATOM 19 O6 G A1553 -18.465 -14.184 11.737 1.00 8.70 O
ATOM 20 N1 G A1553 -16.785 -12.657 11.348 1.00 8.70 N
ATOM 21 C2 G A1553 -15.701 -11.919 11.756 1.00 8.70 C
ATOM 22 N2 G A1553 -15.144 -11.114 10.844 1.00 8.70 N
ATOM 23 N3 G A1553 -15.195 -11.956 12.978 1.00 8.70 N
ATOM 24 C4 G A1553 -15.872 -12.808 13.766 1.00 8.70 C
ATOM 25 P C A1554 -16.465 -8.323 17.634 1.00 0.01 P
ATOM 26 OP1 C A1554 -15.909 -7.109 18.258 1.00 0.01 O
ATOM 27 OP2 C A1554 -17.754 -8.862 18.155 1.00 0.01 O
ATOM 28 O5' C A1554 -16.552 -8.129 16.053 1.00 0.01 O
TER
ATOM 1 O3' C B1550 -9.519 -16.209 16.338 1.00 4.20 O
ATOM 2 P C B1551 -10.803 -15.509 16.965 1.00 3.21 P
ATOM 3 OP1 C B1551 -11.069 -14.284 16.166 1.00 3.21 O
ATOM 4 OP2 C B1551 -10.555 -15.379 18.421 1.00 3.21 O
ATOM 5 O5' C B1551 -11.946 -16.585 16.699 1.00 3.21 O
ATOM 6 C5' C B1551 -13.048 -16.709 17.580 1.00 3.21 C
ATOM 7 C4' C B1551 -14.336 -16.903 16.833 1.00 3.21 C
ATOM 8 O4' C B1551 -14.450 -15.885 15.803 1.00 3.21 O
ATOM 9 C3' C B1551 -14.485 -18.251 16.141 1.00 3.21 C
ATOM 10 O3' C B1551 -15.804 -18.749 16.344 1.00 3.21 O
ATOM 11 C2' C B1551 -14.263 -17.923 14.659 1.00 3.21 C
ATOM 12 O2' C B1551 -14.959 -18.750 13.754 1.00 3.21 O
ATOM 13 C1' C B1551 -14.734 -16.479 14.557 1.00 3.21 C
ATOM 14 N1 C B1551 -14.028 -15.719 13.514 1.00 3.53 N
ATOM 15 C2 C B1551 -14.554 -15.595 12.235 1.00 3.53 C
ATOM 16 O2 C B1551 -15.644 -16.096 11.994 1.00 3.53 O
ATOM 17 N3 C B1551 -13.873 -14.933 11.282 1.00 3.53 N
ATOM 18 C4 C B1551 -12.668 -14.426 11.556 1.00 3.53 C
ATOM 19 N4 C B1551 -11.990 -13.767 10.593 1.00 3.53 N
ATOM 20 C5 C B1551 -12.088 -14.567 12.851 1.00 3.53 C
ATOM 21 C6 C B1551 -12.793 -15.213 13.780 1.00 3.53 C
ATOM 22 P U B1552 -16.301 -19.155 17.819 1.00 26.18 P
ATOM 23 OP1 U B1552 -15.158 -19.803 18.496 1.00 26.18 O
ATOM 24 OP2 U B1552 -17.557 -19.915 17.657 1.00 26.18 O
ATOM 25 O5' U B1552 -16.612 -17.756 18.500 1.00 26.18 O
TER
Atoms:
OP1: (-19.214,-12.032,20.278)
OP2: (-19.341,-13.850,18.459)
C3': (-15.520,-10.755,17.235)
C1': (-14.563,-12.480,15.928)
C5': (-16.023,-12.331,19.169)
O6: (-18.465,-14.184,11.737)
O4': (-14.721,-12.964,17.243)
C8: (-16.551,-13.992,15.471)
C2: (-15.701,-11.919,11.756)
C6: (-17.500,-13.540,12.155)
C5: (-16.966,-13.585,13.452)
C4: (-15.872,-12.808,13.766)
P: (-18.527,-13.031,19.409)
C4': (-15.037,-11.869,18.143)
C2': (-14.675,-10.957,15.988)
O2': (-13.373,-10.414,16.175)
N1: (-16.785,-12.657,11.348)
N2: (-15.144,-11.114,10.844)
N3: (-15.195,-11.956,12.978)
N7: (-17.384,-14.332,14.528)
N9: (-15.612,-13.071,15.081)
O5': (-17.332,-12.329,18.636)
O3': (-15.357,-9.477,17.820)
OP2: (-19.341,-13.850,18.459)
C3': (-15.520,-10.755,17.235)
C1': (-14.563,-12.480,15.928)
C5': (-16.023,-12.331,19.169)
O6: (-18.465,-14.184,11.737)
O4': (-14.721,-12.964,17.243)
C8: (-16.551,-13.992,15.471)
C2: (-15.701,-11.919,11.756)
C6: (-17.500,-13.540,12.155)
C5: (-16.966,-13.585,13.452)
C4: (-15.872,-12.808,13.766)
P: (-18.527,-13.031,19.409)
C4': (-15.037,-11.869,18.143)
C2': (-14.675,-10.957,15.988)
O2': (-13.373,-10.414,16.175)
N1: (-16.785,-12.657,11.348)
N2: (-15.144,-11.114,10.844)
N3: (-15.195,-11.956,12.978)
N7: (-17.384,-14.332,14.528)
N9: (-15.612,-13.071,15.081)
O5': (-17.332,-12.329,18.636)
O3': (-15.357,-9.477,17.820)
C2: (-14.554,-15.595,12.235)
OP1: (-11.069,-14.284,16.166)
OP2: (-10.555,-15.379,18.421)
C4: (-12.668,-14.426,11.556)
O5': (-11.946,-16.585,16.699)
C3': (-14.485,-18.251,16.141)
C1': (-14.734,-16.479,14.557)
O4': (-14.450,-15.885,15.803)
C5': (-13.048,-16.709,17.580)
P: (-10.803,-15.509,16.965)
O2: (-15.644,-16.096,11.994)
C4': (-14.336,-16.903,16.833)
C2': (-14.263,-17.923,14.659)
O2': (-14.959,-18.750,13.754)
N1: (-14.028,-15.719,13.514)
N3: (-13.873,-14.933,11.282)
N4: (-11.990,-13.767,10.593)
C6: (-12.793,-15.213,13.780)
C5: (-12.088,-14.567,12.851)
O3': (-15.804,-18.749,16.344)
OP1: (-11.069,-14.284,16.166)
OP2: (-10.555,-15.379,18.421)
C4: (-12.668,-14.426,11.556)
O5': (-11.946,-16.585,16.699)
C3': (-14.485,-18.251,16.141)
C1': (-14.734,-16.479,14.557)
O4': (-14.450,-15.885,15.803)
C5': (-13.048,-16.709,17.580)
P: (-10.803,-15.509,16.965)
O2: (-15.644,-16.096,11.994)
C4': (-14.336,-16.903,16.833)
C2': (-14.263,-17.923,14.659)
O2': (-14.959,-18.750,13.754)
N1: (-14.028,-15.719,13.514)
N3: (-13.873,-14.933,11.282)
N4: (-11.990,-13.767,10.593)
C6: (-12.793,-15.213,13.780)
C5: (-12.088,-14.567,12.851)
O3': (-15.804,-18.749,16.344)
Image (generated by PyMOL):